{"id":"https://openalex.org/W2160648174","doi":"https://doi.org/10.1093/bioinformatics/btm156","title":"Alignment of molecular networks by integer quadratic programming","display_name":"Alignment of molecular networks by integer quadratic programming","publication_year":2007,"publication_date":"2007-04-27","ids":{"openalex":"https://openalex.org/W2160648174","doi":"https://doi.org/10.1093/bioinformatics/btm156","mag":"2160648174","pmid":"https://pubmed.ncbi.nlm.nih.gov/17468121"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btm156","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm156","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/1631/23704182/btm156.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/1631/23704182/btm156.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065104736","display_name":"Zhenping Li","orcid":"https://orcid.org/0000-0001-8590-8517"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I133712593","display_name":"Osaka Sangyo University","ror":"https://ror.org/01h2m4f20","country_code":"JP","type":"education","lineage":["https://openalex.org/I133712593"]},{"id":"https://openalex.org/I176432857","display_name":"Beijing Wuzi University","ror":"https://ror.org/00bd1d647","country_code":"CN","type":"education","lineage":["https://openalex.org/I176432857"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["CN","JP"],"is_corresponding":false,"raw_author_name":"Zhenping Li","raw_affiliation_strings":["1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan"],"affiliations":[{"raw_affiliation_string":"1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan","institution_ids":["https://openalex.org/I4210165038","https://openalex.org/I74801974","https://openalex.org/I113940042","https://openalex.org/I133712593","https://openalex.org/I176432857"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076619069","display_name":"Shihua Zhang","orcid":"https://orcid.org/0000-0003-0192-7118"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I133712593","display_name":"Osaka Sangyo University","ror":"https://ror.org/01h2m4f20","country_code":"JP","type":"education","lineage":["https://openalex.org/I133712593"]},{"id":"https://openalex.org/I176432857","display_name":"Beijing Wuzi University","ror":"https://ror.org/00bd1d647","country_code":"CN","type":"education","lineage":["https://openalex.org/I176432857"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["CN","JP"],"is_corresponding":false,"raw_author_name":"Shihua Zhang","raw_affiliation_strings":["1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan"],"affiliations":[{"raw_affiliation_string":"1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan","institution_ids":["https://openalex.org/I4210165038","https://openalex.org/I74801974","https://openalex.org/I113940042","https://openalex.org/I133712593","https://openalex.org/I176432857"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041321290","display_name":"Yong Wang","orcid":"https://orcid.org/0000-0001-8533-1789"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I133712593","display_name":"Osaka Sangyo University","ror":"https://ror.org/01h2m4f20","country_code":"JP","type":"education","lineage":["https://openalex.org/I133712593"]},{"id":"https://openalex.org/I176432857","display_name":"Beijing Wuzi University","ror":"https://ror.org/00bd1d647","country_code":"CN","type":"education","lineage":["https://openalex.org/I176432857"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["CN","JP"],"is_corresponding":false,"raw_author_name":"Yong Wang","raw_affiliation_strings":["1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan"],"affiliations":[{"raw_affiliation_string":"1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan","institution_ids":["https://openalex.org/I4210165038","https://openalex.org/I74801974","https://openalex.org/I113940042","https://openalex.org/I133712593","https://openalex.org/I176432857"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xiang-Sun Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I133712593","display_name":"Osaka Sangyo University","ror":"https://ror.org/01h2m4f20","country_code":"JP","type":"education","lineage":["https://openalex.org/I133712593"]},{"id":"https://openalex.org/I176432857","display_name":"Beijing Wuzi University","ror":"https://ror.org/00bd1d647","country_code":"CN","type":"education","lineage":["https://openalex.org/I176432857"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["CN","JP"],"is_corresponding":true,"raw_author_name":"Xiang-Sun Zhang","raw_affiliation_strings":["1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan"],"affiliations":[{"raw_affiliation_string":"1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan","institution_ids":["https://openalex.org/I4210165038","https://openalex.org/I74801974","https://openalex.org/I113940042","https://openalex.org/I133712593","https://openalex.org/I176432857"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012283696","display_name":"Luonan Chen","orcid":"https://orcid.org/0000-0002-3960-0068"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I133712593","display_name":"Osaka Sangyo University","ror":"https://ror.org/01h2m4f20","country_code":"JP","type":"education","lineage":["https://openalex.org/I133712593"]},{"id":"https://openalex.org/I176432857","display_name":"Beijing Wuzi University","ror":"https://ror.org/00bd1d647","country_code":"CN","type":"education","lineage":["https://openalex.org/I176432857"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["CN","JP"],"is_corresponding":true,"raw_author_name":"Luonan Chen","raw_affiliation_strings":["1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan"],"affiliations":[{"raw_affiliation_string":"1 Beijing Wuzi University, Beijing 101149, China, 2Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing 100080, China, 3Graduate University of Chinese Academy of Sciences, Beijing 100049, China, 4Institute of Systems Biology, Shanghai University, Shanghai 200444, China, 5Osaka Sangyo University, Osaka 574-8530, Japan, 6ERATO Aihara Complexity Modelling Project, JST, Tokyo 153-8530, Japan and 7Institite of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan","institution_ids":["https://openalex.org/I4210165038","https://openalex.org/I74801974","https://openalex.org/I113940042","https://openalex.org/I133712593","https://openalex.org/I176432857"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5012283696"],"corresponding_institution_ids":["https://openalex.org/I113940042","https://openalex.org/I133712593","https://openalex.org/I176432857","https://openalex.org/I4210165038","https://openalex.org/I74801974"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":10.4599,"has_fulltext":false,"cited_by_count":104,"citation_normalized_percentile":{"value":0.9876459,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"23","issue":"13","first_page":"1631","last_page":"1639"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6938343048095703},{"id":"https://openalex.org/keywords/integer-programming","display_name":"Integer programming","score":0.6425943374633789},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.6156925559043884},{"id":"https://openalex.org/keywords/quadratic-programming","display_name":"Quadratic programming","score":0.5808756947517395},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5808603763580322},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.52713942527771},{"id":"https://openalex.org/keywords/integer","display_name":"Integer (computer science)","score":0.5186111927032471},{"id":"https://openalex.org/keywords/quadratic-equation","display_name":"Quadratic equation","score":0.4973163902759552},{"id":"https://openalex.org/keywords/matlab","display_name":"MATLAB","score":0.4463919699192047},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.44145667552948},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.30063268542289734},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.2738785147666931},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20201608538627625},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1848124861717224}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6938343048095703},{"id":"https://openalex.org/C56086750","wikidata":"https://www.wikidata.org/wiki/Q6042592","display_name":"Integer programming","level":2,"score":0.6425943374633789},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.6156925559043884},{"id":"https://openalex.org/C81845259","wikidata":"https://www.wikidata.org/wiki/Q290117","display_name":"Quadratic programming","level":2,"score":0.5808756947517395},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5808603763580322},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.52713942527771},{"id":"https://openalex.org/C97137487","wikidata":"https://www.wikidata.org/wiki/Q729138","display_name":"Integer (computer science)","level":2,"score":0.5186111927032471},{"id":"https://openalex.org/C129844170","wikidata":"https://www.wikidata.org/wiki/Q41299","display_name":"Quadratic equation","level":2,"score":0.4973163902759552},{"id":"https://openalex.org/C2780365114","wikidata":"https://www.wikidata.org/wiki/Q169478","display_name":"MATLAB","level":2,"score":0.4463919699192047},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.44145667552948},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.30063268542289734},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.2738785147666931},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20201608538627625},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1848124861717224},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011382","descriptor_name":"Programming, Linear","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011382","descriptor_name":"Programming, Linear","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011382","descriptor_name":"Programming, Linear","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btm156","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm156","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/1631/23704182/btm156.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17468121","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17468121","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btm156","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm156","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/1631/23704182/btm156.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2160648174.pdf","grobid_xml":"https://content.openalex.org/works/W2160648174.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W1599969036","https://openalex.org/W1644749979","https://openalex.org/W1984220047","https://openalex.org/W1984249061","https://openalex.org/W1993384523","https://openalex.org/W2027439534","https://openalex.org/W2029230311","https://openalex.org/W2046618236","https://openalex.org/W2050889354","https://openalex.org/W2063549526","https://openalex.org/W2065175505","https://openalex.org/W2080182143","https://openalex.org/W2081931663","https://openalex.org/W2088455525","https://openalex.org/W2089555521","https://openalex.org/W2100438221","https://openalex.org/W2106202847","https://openalex.org/W2121773288","https://openalex.org/W2127874029","https://openalex.org/W2136850043","https://openalex.org/W2141144953","https://openalex.org/W2144810256","https://openalex.org/W2151875636","https://openalex.org/W2156737316","https://openalex.org/W2159742379","https://openalex.org/W2163296862","https://openalex.org/W2167188257","https://openalex.org/W2167222948","https://openalex.org/W4245668478","https://openalex.org/W6657524342","https://openalex.org/W6675077830"],"related_works":["https://openalex.org/W1925942709","https://openalex.org/W2047683846","https://openalex.org/W2044902158","https://openalex.org/W2109912052","https://openalex.org/W1711527768","https://openalex.org/W2011675579","https://openalex.org/W3036464408","https://openalex.org/W2020990755","https://openalex.org/W2377851227","https://openalex.org/W4293088966"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":13},{"year":2012,"cited_by_count":18}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2016-06-24T00:00:00"}
