{"id":"https://openalex.org/W2146718110","doi":"https://doi.org/10.1093/bioinformatics/btl337","title":"Domain organization within repeated DNA sequences: application to the study of a family of transposable elements","display_name":"Domain organization within repeated DNA sequences: application to the study of a family of transposable elements","publication_year":2006,"publication_date":"2006-06-29","ids":{"openalex":"https://openalex.org/W2146718110","doi":"https://doi.org/10.1093/bioinformatics/btl337","mag":"2146718110","pmid":"https://pubmed.ncbi.nlm.nih.gov/16809391"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btl337","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl337","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067540328","display_name":"S\u00e9bastien Tempel","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"S\u00e9bastien Tempel","raw_affiliation_strings":["CNRS, Universit\u00e9 de Rennes 1 2 \u00a0 2 \u00a0 \u00a0 UMR 6553 Ecobio, Campus de Beaulieu B\u00e2t 14A, 35042 Rennes cedex, France","IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"CNRS, Universit\u00e9 de Rennes 1 2 \u00a0 2 \u00a0 \u00a0 UMR 6553 Ecobio, Campus de Beaulieu B\u00e2t 14A, 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I56067802","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036539061","display_name":"Mathieu Giraud","orcid":"https://orcid.org/0000-0003-2741-8047"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Mathieu Giraud","raw_affiliation_strings":["IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008215565","display_name":"Dominique Lavenier","orcid":"https://orcid.org/0000-0003-2557-680X"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Dominique Lavenier","raw_affiliation_strings":["IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114246210","display_name":"Isra\u00ebl-C\u00e9sar Lerman","orcid":null},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Isra\u00ebl-C\u00e9sar Lerman","raw_affiliation_strings":["IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035189344","display_name":"Anne-Sophie Valin","orcid":null},"institutions":[{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anne-Sophie Valin","raw_affiliation_strings":["IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047509651","display_name":"Ivan Cou\u00e9e","orcid":"https://orcid.org/0000-0002-1117-0043"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ivan Cou\u00e9e","raw_affiliation_strings":["CNRS, Universit\u00e9 de Rennes 1 2 \u00a0 2 \u00a0 \u00a0 UMR 6553 Ecobio, Campus de Beaulieu B\u00e2t 14A, 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"CNRS, Universit\u00e9 de Rennes 1 2 \u00a0 2 \u00a0 \u00a0 UMR 6553 Ecobio, Campus de Beaulieu B\u00e2t 14A, 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I56067802","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070842794","display_name":"Abdelhak El Amrani","orcid":"https://orcid.org/0000-0001-6078-8379"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Abdelhak El Amrani","raw_affiliation_strings":["CNRS, Universit\u00e9 de Rennes 1 2 \u00a0 2 \u00a0 \u00a0 UMR 6553 Ecobio, Campus de Beaulieu B\u00e2t 14A, 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"CNRS, Universit\u00e9 de Rennes 1 2 \u00a0 2 \u00a0 \u00a0 UMR 6553 Ecobio, Campus de Beaulieu B\u00e2t 14A, 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I56067802","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103534129","display_name":"Jacques Nicolas","orcid":null},"institutions":[{"id":"https://openalex.org/I2802519937","display_name":"Institut de Recherche en Informatique et Syst\u00e8mes Al\u00e9atoires","ror":"https://ror.org/00myn0z94","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I205703379","https://openalex.org/I2802204017","https://openalex.org/I2802519937","https://openalex.org/I28221208","https://openalex.org/I4210127572","https://openalex.org/I4210159245","https://openalex.org/I56067802"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jacques Nicolas","raw_affiliation_strings":["IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France"],"affiliations":[{"raw_affiliation_string":"IRISA-INRIA, Campus de Beaulieu B\u00e2t 12 1 \u00a0 1 \u00a0 \u00a0 35042 Rennes cedex, France","institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I2802519937"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5067540328"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2802519937","https://openalex.org/I56067802"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.0286,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.88337376,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"22","issue":"16","first_page":"1948","last_page":"1954"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.8678945302963257},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7389659285545349},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.6309480667114258},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5222369432449341},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.5007069110870361},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4623723030090332},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.45286980271339417},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4515497088432312},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.4242873787879944},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.41165655851364136},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.35661816596984863},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.2922931909561157},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20567968487739563},{"id":"https://openalex.org/keywords/mutant","display_name":"Mutant","score":0.12448683381080627},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10394111275672913},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08652129769325256}],"concepts":[{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.8678945302963257},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7389659285545349},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.6309480667114258},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5222369432449341},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.5007069110870361},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4623723030090332},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.45286980271339417},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4515497088432312},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.4242873787879944},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.41165655851364136},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.35661816596984863},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.2922931909561157},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20567968487739563},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.12448683381080627},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10394111275672913},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08652129769325256},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btl337","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl337","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16809391","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16809391","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320313934","display_name":"Institut national de recherche en informatique et en automatique (INRIA)","ror":"https://ror.org/02kvxyf05"},{"id":"https://openalex.org/F4320321617","display_name":"Minist\u00e8re de l'\u00c9ducation Nationale","ror":"https://ror.org/04xp49e10"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W233486025","https://openalex.org/W1975482179","https://openalex.org/W1982026570","https://openalex.org/W2009570821","https://openalex.org/W2015397797","https://openalex.org/W2018700979","https://openalex.org/W2026658502","https://openalex.org/W2037611852","https://openalex.org/W2039775516","https://openalex.org/W2040386650","https://openalex.org/W2047630272","https://openalex.org/W2069833151","https://openalex.org/W2071501400","https://openalex.org/W2072603366","https://openalex.org/W2073915279","https://openalex.org/W2081964274","https://openalex.org/W2087885007","https://openalex.org/W2092813578","https://openalex.org/W2093205346","https://openalex.org/W2097732206","https://openalex.org/W2101428815","https://openalex.org/W2106882534","https://openalex.org/W2116016140","https://openalex.org/W2122497741","https://openalex.org/W2122954888","https://openalex.org/W2124244625","https://openalex.org/W2133002406","https://openalex.org/W2134965616","https://openalex.org/W2144268209","https://openalex.org/W2146133538","https://openalex.org/W2150520826","https://openalex.org/W2151405227","https://openalex.org/W2151831732","https://openalex.org/W2151899848","https://openalex.org/W2155429032","https://openalex.org/W2158714788","https://openalex.org/W2163960662","https://openalex.org/W2164799476","https://openalex.org/W2166281646","https://openalex.org/W2171038200","https://openalex.org/W4245668478","https://openalex.org/W4285719527","https://openalex.org/W6644341778","https://openalex.org/W6654038208","https://openalex.org/W6660414024","https://openalex.org/W6662330256","https://openalex.org/W6668478239"],"related_works":["https://openalex.org/W3147805512","https://openalex.org/W1594012662","https://openalex.org/W2106134872","https://openalex.org/W2269421989","https://openalex.org/W3147624048","https://openalex.org/W2006745274","https://openalex.org/W2355042192","https://openalex.org/W2391996571","https://openalex.org/W2372627703","https://openalex.org/W1987749596"],"abstract_inverted_index":{"DomainOrganizer":[0],"web":[1],"page":[2],"is":[3],"available":[4],"at":[5],"www.irisa.fr/symbiose/DomainOrganizer/.":[6]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
