{"id":"https://openalex.org/W2107519221","doi":"https://doi.org/10.1093/bioinformatics/btl036","title":"The LCB Data Warehouse","display_name":"The LCB Data Warehouse","publication_year":2006,"publication_date":"2006-02-02","ids":{"openalex":"https://openalex.org/W2107519221","doi":"https://doi.org/10.1093/bioinformatics/btl036","mag":"2107519221","pmid":"https://pubmed.ncbi.nlm.nih.gov/16455749"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btl036","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl036","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/8/1024/48840279/bioinformatics_22_8_1024.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/22/8/1024/48840279/bioinformatics_22_8_1024.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088555276","display_name":"Adam Ameur","orcid":"https://orcid.org/0000-0001-6085-6749"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Adam Ameur","raw_affiliation_strings":["The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden","institution_ids":["https://openalex.org/I298625061","https://openalex.org/I123387679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063784150","display_name":"Vladimir Yankovski","orcid":null},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Vladimir Yankovski","raw_affiliation_strings":["The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden","institution_ids":["https://openalex.org/I298625061","https://openalex.org/I123387679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053703926","display_name":"Stefan Enroth","orcid":"https://orcid.org/0000-0002-5056-9137"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Stefan Enroth","raw_affiliation_strings":["The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden","institution_ids":["https://openalex.org/I298625061","https://openalex.org/I123387679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046663348","display_name":"Ola Spjuth","orcid":"https://orcid.org/0000-0002-8083-2864"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Ola Spjuth","raw_affiliation_strings":["Department of Pharmaceutical Biosciences, Uppsala University 2 \u00a0 2 \u00a0 \u00a0 Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Biosciences, Uppsala University 2 \u00a0 2 \u00a0 \u00a0 Sweden","institution_ids":["https://openalex.org/I123387679"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050406527","display_name":"Jan Komorowski","orcid":"https://orcid.org/0000-0002-0766-8789"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Jan Komorowski","raw_affiliation_strings":["The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Linnaeus Centre for Bioinformatics, Uppsala University and The Swedish University for Agricultural Sciences 1 \u00a0 1 \u00a0 \u00a0 Sweden","institution_ids":["https://openalex.org/I298625061","https://openalex.org/I123387679"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5050406527"],"corresponding_institution_ids":["https://openalex.org/I123387679","https://openalex.org/I298625061"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.682,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.93444624,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"22","issue":"8","first_page":"1024","last_page":"1026"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9549999833106995,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9549999833106995,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.004100000020116568,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.003800000064074993,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6781144142150879},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.606648862361908},{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.5339869856834412},{"id":"https://openalex.org/keywords/data-warehouse","display_name":"Data warehouse","score":0.5194756388664246},{"id":"https://openalex.org/keywords/login","display_name":"Login","score":0.4905082583427429},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.4701445400714874},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.4663298428058624},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.458088755607605},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.43772563338279724},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.3200494050979614}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6781144142150879},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.606648862361908},{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.5339869856834412},{"id":"https://openalex.org/C135572916","wikidata":"https://www.wikidata.org/wiki/Q193351","display_name":"Data warehouse","level":2,"score":0.5194756388664246},{"id":"https://openalex.org/C113324615","wikidata":"https://www.wikidata.org/wiki/Q472302","display_name":"Login","level":2,"score":0.4905082583427429},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.4701445400714874},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.4663298428058624},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.458088755607605},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.43772563338279724},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3200494050979614},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btl036","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl036","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/8/1024/48840279/bioinformatics_22_8_1024.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16455749","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16455749","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btl036","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btl036","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/8/1024/48840279/bioinformatics_22_8_1024.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6499999761581421,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322327","display_name":"Knut och Alice Wallenbergs Stiftelse","ror":"https://ror.org/004hzzk67"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2107519221.pdf","grobid_xml":"https://content.openalex.org/works/W2107519221.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1486283310","https://openalex.org/W1544923801","https://openalex.org/W1969761972","https://openalex.org/W2100471807","https://openalex.org/W2103017472","https://openalex.org/W2135557996","https://openalex.org/W2160697532","https://openalex.org/W4229880569","https://openalex.org/W4253759977"],"related_works":["https://openalex.org/W2135678793","https://openalex.org/W2109288169","https://openalex.org/W2157684052","https://openalex.org/W4223449272","https://openalex.org/W2978247079","https://openalex.org/W2166887457","https://openalex.org/W2148708580","https://openalex.org/W2093416473","https://openalex.org/W3036080447","https://openalex.org/W4238519267"],"abstract_inverted_index":{"UNLABELLED:":[0],"The":[1,33,92],"Linnaeus":[2],"Centre":[3],"for":[4,13,29,42,66,80],"Bioinformatics":[5],"Data":[6],"Warehouse":[7],"(LCB-DWH)":[8],"is":[9,35,94,117],"a":[10,39,77,99,134],"web-based":[11],"infrastructure":[12],"reliable":[14],"and":[15,22,49,76,83,96,133],"secure":[16],"microarray":[17,52],"gene":[18],"expression":[19],"data":[20,67,137],"management":[21],"analysis":[23,48],"that":[24],"provides":[25],"an":[26,36],"online":[27],"service":[28,93],"the":[30,45,57,72,87,90],"scientific":[31],"community.":[32],"LCB-DWH":[34],"effort":[37],"towards":[38],"complete":[40],"system":[41,58,139],"storage":[43,138],"(using":[44],"BASE":[46],"system),":[47],"publication":[50],"of":[51,56,85,89],"data.":[53],"Important":[54],"features":[55],"include:":[59],"access":[60],"to":[61,71],"established":[62],"methods":[63],"within":[64],"R/Bioconductor":[65],"analysis,":[68],"built-in":[69],"connection":[70],"Gene":[73],"Ontology":[74],"database":[75],"scripting":[78],"facility":[79],"automatic":[81],"recording":[82],"re-play":[84],"all":[86],"steps":[88],"analysis.":[91],"up":[95],"running":[97],"on":[98],"high":[100],"performance":[101],"server.":[102],"At":[103],"present":[104],"there":[105],"are":[106,123,140],"more":[107],"than":[108],"150":[109],"registered":[110],"users.":[111],"AVAILABILITY:":[112],"An":[113],"open":[114],"functional":[115],"version":[116],"available":[118,141],"at":[119],"https://dw.lcb.uu.se/index.phtml?i_login=test.":[120],"User":[121],"accounts":[122],"created":[124],"upon":[125],"request.":[126],"Additional":[127],"facilities":[128],"including":[129],"plug-ins,":[130],"user":[131],"documentation":[132],"password":[135],"protected":[136],"from":[142],"http://www.lcb.uu.se/lcbdw.php":[143]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
