{"id":"https://openalex.org/W2097775366","doi":"https://doi.org/10.1093/bioinformatics/btk023","title":"OPM: Orientations of Proteins in Membranes database","display_name":"OPM: Orientations of Proteins in Membranes database","publication_year":2006,"publication_date":"2006-01-05","ids":{"openalex":"https://openalex.org/W2097775366","doi":"https://doi.org/10.1093/bioinformatics/btk023","mag":"2097775366","pmid":"https://pubmed.ncbi.nlm.nih.gov/16397007"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btk023","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btk023","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/5/623/48838380/bioinformatics_22_5_623.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/22/5/623/48838380/bioinformatics_22_5_623.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017804727","display_name":"Mikhail A. Lomize","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mikhail A. Lomize","raw_affiliation_strings":["College of Literature, Science and the Arts, University of Michigan 1 \u00a0 1 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA"],"affiliations":[{"raw_affiliation_string":"College of Literature, Science and the Arts, University of Michigan 1 \u00a0 1 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056114039","display_name":"Andrei L. Lomize","orcid":"https://orcid.org/0000-0002-3044-7597"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrei L. Lomize","raw_affiliation_strings":["College of Pharmacy, University of Michigan 2 \u00a0 2 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA"],"affiliations":[{"raw_affiliation_string":"College of Pharmacy, University of Michigan 2 \u00a0 2 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006189599","display_name":"Irina D. Pogozheva","orcid":"https://orcid.org/0000-0002-3024-9574"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Irina D. Pogozheva","raw_affiliation_strings":["College of Pharmacy, University of Michigan 2 \u00a0 2 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA"],"affiliations":[{"raw_affiliation_string":"College of Pharmacy, University of Michigan 2 \u00a0 2 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079002496","display_name":"Henry I. Mosberg","orcid":"https://orcid.org/0000-0002-4107-8870"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Henry I. Mosberg","raw_affiliation_strings":["College of Pharmacy, University of Michigan 2 \u00a0 2 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA"],"affiliations":[{"raw_affiliation_string":"College of Pharmacy, University of Michigan 2 \u00a0 2 \u00a0 \u00a0 Ann Arbor, MI 48109-1065, USA","institution_ids":["https://openalex.org/I27837315"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5017804727"],"corresponding_institution_ids":["https://openalex.org/I27837315"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":11.8512,"has_fulltext":true,"cited_by_count":1181,"citation_normalized_percentile":{"value":0.99238566,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"22","issue":"5","first_page":"623","last_page":"625"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/membrane-protein","display_name":"Membrane protein","score":0.6992289423942566},{"id":"https://openalex.org/keywords/transmembrane-protein","display_name":"Transmembrane protein","score":0.6946747303009033},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.6692314147949219},{"id":"https://openalex.org/keywords/lipid-bilayer","display_name":"Lipid bilayer","score":0.582694411277771},{"id":"https://openalex.org/keywords/peripheral-membrane-protein","display_name":"Peripheral membrane protein","score":0.5185726284980774},{"id":"https://openalex.org/keywords/bilayer","display_name":"Bilayer","score":0.5040048956871033},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47991856932640076},{"id":"https://openalex.org/keywords/sorting","display_name":"Sorting","score":0.4327784478664398},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.382021427154541},{"id":"https://openalex.org/keywords/integral-membrane-protein","display_name":"Integral membrane protein","score":0.3631584346294403},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3439173698425293},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3240954279899597},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.32182663679122925},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2280586063861847},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.20681235194206238},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.15952453017234802}],"concepts":[{"id":"https://openalex.org/C144647389","wikidata":"https://www.wikidata.org/wiki/Q423042","display_name":"Membrane protein","level":3,"score":0.6992289423942566},{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.6946747303009033},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.6692314147949219},{"id":"https://openalex.org/C39944091","wikidata":"https://www.wikidata.org/wiki/Q423279","display_name":"Lipid bilayer","level":3,"score":0.582694411277771},{"id":"https://openalex.org/C560191","wikidata":"https://www.wikidata.org/wiki/Q417736","display_name":"Peripheral membrane protein","level":5,"score":0.5185726284980774},{"id":"https://openalex.org/C192157962","wikidata":"https://www.wikidata.org/wiki/Q4087243","display_name":"Bilayer","level":3,"score":0.5040048956871033},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47991856932640076},{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.4327784478664398},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.382021427154541},{"id":"https://openalex.org/C161200384","wikidata":"https://www.wikidata.org/wiki/Q1757382","display_name":"Integral membrane protein","level":4,"score":0.3631584346294403},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3439173698425293},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3240954279899597},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.32182663679122925},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2280586063861847},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.20681235194206238},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.15952453017234802},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btk023","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btk023","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/5/623/48838380/bioinformatics_22_5_623.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16397007","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16397007","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btk023","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btk023","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/22/5/623/48838380/bioinformatics_22_5_623.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.4399999976158142}],"awards":[{"id":"https://openalex.org/G7463953740","display_name":null,"funder_award_id":"DA003910","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332460","display_name":"College of Pharmacy, University of Michigan","ror":"https://ror.org/00jmfr291"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2097775366.pdf","grobid_xml":"https://content.openalex.org/works/W2097775366.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1707091457","https://openalex.org/W1736189198","https://openalex.org/W1971730109","https://openalex.org/W1977845138","https://openalex.org/W2056402029","https://openalex.org/W2074266029","https://openalex.org/W2083334314","https://openalex.org/W2125725297","https://openalex.org/W2128882835","https://openalex.org/W2129838159","https://openalex.org/W2130479394","https://openalex.org/W2143579082","https://openalex.org/W2160131169","https://openalex.org/W2513885104","https://openalex.org/W3024531541","https://openalex.org/W6725513719"],"related_works":["https://openalex.org/W69410109","https://openalex.org/W4386271761","https://openalex.org/W4251804718","https://openalex.org/W251897196","https://openalex.org/W2107584639","https://openalex.org/W2285098056","https://openalex.org/W2183935094","https://openalex.org/W2116405747","https://openalex.org/W2156144788","https://openalex.org/W1987129763"],"abstract_inverted_index":{"http://opm.phar.umich.edu.":[0]},"counts_by_year":[{"year":2026,"cited_by_count":13},{"year":2025,"cited_by_count":55},{"year":2024,"cited_by_count":48},{"year":2023,"cited_by_count":55},{"year":2022,"cited_by_count":61},{"year":2021,"cited_by_count":65},{"year":2020,"cited_by_count":70},{"year":2019,"cited_by_count":75},{"year":2018,"cited_by_count":86},{"year":2017,"cited_by_count":113},{"year":2016,"cited_by_count":85},{"year":2015,"cited_by_count":91},{"year":2014,"cited_by_count":59},{"year":2013,"cited_by_count":65},{"year":2012,"cited_by_count":52}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}