{"id":"https://openalex.org/W2107091012","doi":"https://doi.org/10.1093/bioinformatics/bti747","title":"Nexplorer: phylogeny-based exploration of sequence family data","display_name":"Nexplorer: phylogeny-based exploration of sequence family data","publication_year":2005,"publication_date":"2005-11-02","ids":{"openalex":"https://openalex.org/W2107091012","doi":"https://doi.org/10.1093/bioinformatics/bti747","mag":"2107091012","pmid":"https://pubmed.ncbi.nlm.nih.gov/16267087"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bti747","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti747","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://doi.org/10.1093/bioinformatics/bti747","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057173679","display_name":"Vivek Gopalan","orcid":null},"institutions":[{"id":"https://openalex.org/I4210152530","display_name":"Advanced Bioscience Laboratories (United States)","ror":"https://ror.org/04v1j8c44","country_code":"US","type":"company","lineage":["https://openalex.org/I4210152530"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vivek Gopalan","raw_affiliation_strings":["Center for Advanced Research in Biotechnology 1 \u00a0 1 \u00a0 \u00a0 9600 Gudelsky Drive, Rockville, MD 20850, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Advanced Research in Biotechnology 1 \u00a0 1 \u00a0 \u00a0 9600 Gudelsky Drive, Rockville, MD 20850, USA","institution_ids":["https://openalex.org/I4210152530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058885083","display_name":"Weigang Qiu","orcid":"https://orcid.org/0000-0003-4585-1872"},"institutions":[{"id":"https://openalex.org/I39694355","display_name":"Hunter College","ror":"https://ror.org/00g2xk477","country_code":"US","type":"education","lineage":["https://openalex.org/I39694355"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei-Gang Qiu","raw_affiliation_strings":["Department of Biological Sciences, Hunter College 2 \u00a0 2 \u00a0 \u00a0 CUNY, 695 Park Avenue, New York, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Hunter College 2 \u00a0 2 \u00a0 \u00a0 CUNY, 695 Park Avenue, New York, NY 10021, USA","institution_ids":["https://openalex.org/I39694355"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029348508","display_name":"Michael Z. Chen","orcid":"https://orcid.org/0000-0002-2998-9014"},"institutions":[{"id":"https://openalex.org/I4210152530","display_name":"Advanced Bioscience Laboratories (United States)","ror":"https://ror.org/04v1j8c44","country_code":"US","type":"company","lineage":["https://openalex.org/I4210152530"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Z. Chen","raw_affiliation_strings":["Center for Advanced Research in Biotechnology 1 \u00a0 1 \u00a0 \u00a0 9600 Gudelsky Drive, Rockville, MD 20850, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Advanced Research in Biotechnology 1 \u00a0 1 \u00a0 \u00a0 9600 Gudelsky Drive, Rockville, MD 20850, USA","institution_ids":["https://openalex.org/I4210152530"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012113866","display_name":"Arlin Stoltzfus","orcid":"https://orcid.org/0000-0002-0963-1357"},"institutions":[{"id":"https://openalex.org/I1321296531","display_name":"National Institute of Standards and Technology","ror":"https://ror.org/05xpvk416","country_code":"US","type":"funder","lineage":["https://openalex.org/I1321296531","https://openalex.org/I1343035065"]},{"id":"https://openalex.org/I4210152530","display_name":"Advanced Bioscience Laboratories (United States)","ror":"https://ror.org/04v1j8c44","country_code":"US","type":"company","lineage":["https://openalex.org/I4210152530"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Arlin Stoltzfus","raw_affiliation_strings":["Center for Advanced Research in Biotechnology 1 \u00a0 1 \u00a0 \u00a0 9600 Gudelsky Drive, Rockville, MD 20850, USA","National Institute of Standards and Technology, Biochemical Science Division 3 \u00a0 3 \u00a0 \u00a0 Gaithersburg, MD 20899-8310, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Advanced Research in Biotechnology 1 \u00a0 1 \u00a0 \u00a0 9600 Gudelsky Drive, Rockville, MD 20850, USA","institution_ids":["https://openalex.org/I4210152530"]},{"raw_affiliation_string":"National Institute of Standards and Technology, Biochemical Science Division 3 \u00a0 3 \u00a0 \u00a0 Gaithersburg, MD 20899-8310, USA","institution_ids":["https://openalex.org/I1321296531"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5012113866"],"corresponding_institution_ids":["https://openalex.org/I1321296531","https://openalex.org/I4210152530"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.3768,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.60383514,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"22","issue":"1","first_page":"120","last_page":"121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3846000134944916,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.3846000134944916,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.1306000053882599,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.06270000338554382,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7315830588340759},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7067530155181885},{"id":"https://openalex.org/keywords/family-tree","display_name":"Family tree","score":0.579492449760437},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.5404094457626343},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5202454328536987},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics","score":0.48616334795951843},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4708420932292938},{"id":"https://openalex.org/keywords/nexus","display_name":"Nexus (standard)","score":0.4314323663711548},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4266054928302765},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.403475284576416},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3848983645439148},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.15225562453269958},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14539098739624023},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0934474766254425}],"concepts":[{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7315830588340759},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7067530155181885},{"id":"https://openalex.org/C80429922","wikidata":"https://www.wikidata.org/wiki/Q189977","display_name":"Family tree","level":2,"score":0.579492449760437},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.5404094457626343},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5202454328536987},{"id":"https://openalex.org/C77660652","wikidata":"https://www.wikidata.org/wiki/Q150971","display_name":"Computer graphics","level":2,"score":0.48616334795951843},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4708420932292938},{"id":"https://openalex.org/C148609458","wikidata":"https://www.wikidata.org/wiki/Q7021281","display_name":"Nexus (standard)","level":2,"score":0.4314323663711548},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4266054928302765},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.403475284576416},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3848983645439148},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.15225562453269958},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14539098739624023},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0934474766254425},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.0},{"id":"https://openalex.org/C53553401","wikidata":"https://www.wikidata.org/wiki/Q47307","display_name":"Genealogy","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025261","descriptor_name":"Mitochondrial Proton-Translocating ATPases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D025261","descriptor_name":"Mitochondrial Proton-Translocating ATPases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D025261","descriptor_name":"Mitochondrial Proton-Translocating ATPases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bti747","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti747","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16267087","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16267087","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.108.2035","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.108.2035","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/cgi/reprint/22/1/120.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1615790","is_oa":true,"landing_page_url":"http://doi.org/10.1093/bioinformatics/bti747","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:1615790","is_oa":true,"landing_page_url":"http://doi.org/10.1093/bioinformatics/bti747","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2848008041","display_name":null,"funder_award_id":"S06 GM060654","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4030097866","display_name":null,"funder_award_id":"R01 LM007218","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G8962225147","display_name":null,"funder_award_id":"R01 LM 007218","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G8991360060","display_name":null,"funder_award_id":"GM 060654","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332178","display_name":"National Institute of Standards and Technology","ror":"https://ror.org/05xpvk416"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":3,"referenced_works":["https://openalex.org/W2020166242","https://openalex.org/W2082853849","https://openalex.org/W2100412820"],"related_works":["https://openalex.org/W3126909309","https://openalex.org/W4256360871","https://openalex.org/W2747100754","https://openalex.org/W2965101536","https://openalex.org/W2891178753","https://openalex.org/W3121214617","https://openalex.org/W2802787844","https://openalex.org/W2885513359","https://openalex.org/W2991202600","https://openalex.org/W2221819563"],"abstract_inverted_index":{"SUMMARY:":[0],"Nexplorer":[1,48],"is":[2,83],"a":[3,35,50,59,62],"web-based":[4],"program":[5],"for":[6,19],"interactive":[7],"browsing":[8],"and":[9,23,61,72],"manipulation":[10],"of":[11,27,43,70],"character":[12],"data":[13,63,75],"in":[14],"NEXUS":[15],"format,":[16],"well":[17],"suited":[18],"use":[20],"with":[21],"alignments":[22],"trees":[24],"representing":[25],"families":[26],"homologous":[28],"genes":[29],"or":[30,39,65,77],"proteins.":[31],"Users":[32],"may":[33],"upload":[34],"sequence":[36],"family":[37],"dataset,":[38],"choose":[40],"from":[41,84],"one":[42],"several":[44],"thousand":[45],"already":[46],"available.":[47],"provides":[49],"flexible":[51],"means":[52],"to":[53,67,73],"develop":[54],"customized":[55],"views":[56],"that":[57],"combine":[58],"tree":[60],"matrix":[64],"alignment,":[66],"create":[68],"subsets":[69],"data,":[71],"output":[74],"files":[76],"publication-quality":[78],"graphics.":[79],"AVAILABILITY:":[80],"Web":[81],"access":[82],"http://www.molevol.org/nexplorer":[85]},"counts_by_year":[{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
