{"id":"https://openalex.org/W2131657764","doi":"https://doi.org/10.1093/bioinformatics/bti359","title":"ADAPT: a database of affymetrix probesets and transcripts","display_name":"ADAPT: a database of affymetrix probesets and transcripts","publication_year":2005,"publication_date":"2005-03-03","ids":{"openalex":"https://openalex.org/W2131657764","doi":"https://doi.org/10.1093/bioinformatics/bti359","mag":"2131657764","pmid":"https://pubmed.ncbi.nlm.nih.gov/15746287"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bti359","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti359","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/21/10/2552/544735/bti359.pdf","source":{"id":"https://openalex.org/S4210188263","display_name":"Computer applications in the biosciences","issn_l":"0266-7061","issn":["0266-7061","1460-2059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/21/10/2552/544735/bti359.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019089933","display_name":"Hui Sun Leong","orcid":"https://orcid.org/0000-0003-0890-6432"},"institutions":[{"id":"https://openalex.org/I4210129527","display_name":"Cancer Research UK Manchester Institute","ror":"https://ror.org/037405c78","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2801316944","https://openalex.org/I4210129527"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"H. S. Leong","raw_affiliation_strings":["Paterson Institute for Cancer Research, Wilmslow Road, Manchester M20 4BX, UK","Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#"],"affiliations":[{"raw_affiliation_string":"Paterson Institute for Cancer Research, Wilmslow Road, Manchester M20 4BX, UK","institution_ids":["https://openalex.org/I4210129527"]},{"raw_affiliation_string":"Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#","institution_ids":["https://openalex.org/I4210129527"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115599981","display_name":"Tom Yates","orcid":"https://orcid.org/0000-0002-6081-1767"},"institutions":[{"id":"https://openalex.org/I4210129527","display_name":"Cancer Research UK Manchester Institute","ror":"https://ror.org/037405c78","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2801316944","https://openalex.org/I4210129527"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"T. Yates","raw_affiliation_strings":["Paterson Institute for Cancer Research  Wilmslow Road, Manchester M20 4BX, UK","Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#"],"affiliations":[{"raw_affiliation_string":"Paterson Institute for Cancer Research  Wilmslow Road, Manchester M20 4BX, UK","institution_ids":["https://openalex.org/I4210129527"]},{"raw_affiliation_string":"Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#","institution_ids":["https://openalex.org/I4210129527"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110330731","display_name":"Charles L. Wilson","orcid":null},"institutions":[{"id":"https://openalex.org/I4210129527","display_name":"Cancer Research UK Manchester Institute","ror":"https://ror.org/037405c78","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2801316944","https://openalex.org/I4210129527"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"C. Wilson","raw_affiliation_strings":["Paterson Institute for Cancer Research  Wilmslow Road, Manchester M20 4BX, UK","Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#"],"affiliations":[{"raw_affiliation_string":"Paterson Institute for Cancer Research  Wilmslow Road, Manchester M20 4BX, UK","institution_ids":["https://openalex.org/I4210129527"]},{"raw_affiliation_string":"Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#","institution_ids":["https://openalex.org/I4210129527"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072265839","display_name":"Crispin Miller","orcid":"https://orcid.org/0000-0003-4341-1283"},"institutions":[{"id":"https://openalex.org/I4210129527","display_name":"Cancer Research UK Manchester Institute","ror":"https://ror.org/037405c78","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2801316944","https://openalex.org/I4210129527"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"C. J. Miller","raw_affiliation_strings":["Paterson Institute for Cancer Research  Wilmslow Road, Manchester M20 4BX, UK","Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#"],"affiliations":[{"raw_affiliation_string":"Paterson Institute for Cancer Research  Wilmslow Road, Manchester M20 4BX, UK","institution_ids":["https://openalex.org/I4210129527"]},{"raw_affiliation_string":"Paterson Institute for Cancer Research Wilmslow Road, Manchester M20 4BX, UK#TAB#","institution_ids":["https://openalex.org/I4210129527"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5019089933"],"corresponding_institution_ids":["https://openalex.org/I4210129527"],"apc_list":null,"apc_paid":null,"fwci":2.0921,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.86631475,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"21","issue":"10","first_page":"2552","last_page":"2553"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9828000068664551,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.9249382615089417},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.8541820049285889},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6023572087287903},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4674934446811676},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.4373878836631775},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.34319621324539185},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32951056957244873},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26742294430732727},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25521332025527954},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17554771900177002},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.1423681080341339},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.11923626065254211},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.11744889616966248}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.9249382615089417},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.8541820049285889},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6023572087287903},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4674934446811676},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.4373878836631775},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.34319621324539185},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32951056957244873},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26742294430732727},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25521332025527954},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17554771900177002},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.1423681080341339},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.11923626065254211},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.11744889616966248}],"mesh":[{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015342","descriptor_name":"DNA Probes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015342","descriptor_name":"DNA Probes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015342","descriptor_name":"DNA Probes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017404","descriptor_name":"In Situ Hybridization, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017404","descriptor_name":"In Situ Hybridization, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017404","descriptor_name":"In Situ Hybridization, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bti359","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti359","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/21/10/2552/544735/bti359.pdf","source":{"id":"https://openalex.org/S4210188263","display_name":"Computer applications in the biosciences","issn_l":"0266-7061","issn":["0266-7061","1460-2059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:15746287","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15746287","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/4dc98e80-bd97-4ca9-aacd-602265314b17","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/4dc98e80-bd97-4ca9-aacd-602265314b17","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Leong, H S, Yates, T, Wilson, C & Miller, C J 2005, 'ADAPT: A database of affymetrix probesets and transcripts', Bioinformatics, vol. 21, no. 10, pp. 2552-2553. https://doi.org/10.1093/bioinformatics/bti359","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.atira.dk:publications/4dc98e80-bd97-4ca9-aacd-602265314b17","is_oa":false,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/adapt-a-database-of-affymetrix-probesets-and-transcripts(4dc98e80-bd97-4ca9-aacd-602265314b17).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Leong, H S, Yates, T, Wilson, C & Miller, C J 2005, 'ADAPT: A database of affymetrix probesets and transcripts', Bioinformatics, vol. 21, no. 10, pp. 2552-2553. https://doi.org/10.1093/bioinformatics/bti359","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bti359","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti359","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/21/10/2552/544735/bti359.pdf","source":{"id":"https://openalex.org/S4210188263","display_name":"Computer applications in the biosciences","issn_l":"0266-7061","issn":["0266-7061","1460-2059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2131657764.pdf","grobid_xml":"https://content.openalex.org/works/W2131657764.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W2108543860","https://openalex.org/W2121466369","https://openalex.org/W2122232025","https://openalex.org/W2122683221","https://openalex.org/W2131320300","https://openalex.org/W2148911704"],"related_works":["https://openalex.org/W2039941094","https://openalex.org/W4386011922","https://openalex.org/W2076586896","https://openalex.org/W2098680190","https://openalex.org/W4383818008","https://openalex.org/W2068850418","https://openalex.org/W2145809383","https://openalex.org/W2010737390","https://openalex.org/W3109735703","https://openalex.org/W2041889388"],"abstract_inverted_index":{"ADAPT":[0],"can":[1],"be":[2],"queried":[3],"via":[4],"the":[5],"web":[6],"at":[7],"http://bioinformatics.picr.man.ac.uk/adapt":[8]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
