{"id":"https://openalex.org/W2114144373","doi":"https://doi.org/10.1093/bioinformatics/bti239","title":"Quantifying the relevance of different mediators in the human immune cell network","display_name":"Quantifying the relevance of different mediators in the human immune cell network","publication_year":2004,"publication_date":"2004-12-21","ids":{"openalex":"https://openalex.org/W2114144373","doi":"https://doi.org/10.1093/bioinformatics/bti239","mag":"2114144373","pmid":"https://pubmed.ncbi.nlm.nih.gov/15613387"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bti239","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti239","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/21/8/1639/48973290/bioinformatics_21_8_1639.pdf","source":{"id":"https://openalex.org/S4210188263","display_name":"Computer applications in the biosciences","issn_l":"0266-7061","issn":["0266-7061","1460-2059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/21/8/1639/48973290/bioinformatics_21_8_1639.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007136874","display_name":"Paolo Tieri","orcid":"https://orcid.org/0000-0002-3635-7664"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"P. Tieri","raw_affiliation_strings":["Dipartimento di Patologia Sperimentale, Universit\u00e0 di Bologna, Via San Giacomo 12, 40126 Bologna, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Patologia Sperimentale, Universit\u00e0 di Bologna, Via San Giacomo 12, 40126 Bologna, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028945799","display_name":"Silvana Valensin","orcid":null},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"S. Valensin","raw_affiliation_strings":["C.I.G.---Centro Interdipartimentale 'L. Galvani' per Studi Integrati di Bioinformatica, Biofisica e Biocomplessit\u00e0, Universit\u00e0 di Bologna Via S.Giacomo 12, 40126, Bologna, Italy#TAB#"],"affiliations":[{"raw_affiliation_string":"C.I.G.---Centro Interdipartimentale 'L. Galvani' per Studi Integrati di Bioinformatica, Biofisica e Biocomplessit\u00e0, Universit\u00e0 di Bologna Via S.Giacomo 12, 40126, Bologna, Italy#TAB#","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027706684","display_name":"Vito Latora","orcid":"https://orcid.org/0000-0002-0984-8038"},"institutions":[{"id":"https://openalex.org/I4210116497","display_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Catania","ror":"https://ror.org/02pq29p90","country_code":"IT","type":"facility","lineage":["https://openalex.org/I160013858","https://openalex.org/I4210116497"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"V. Latora","raw_affiliation_strings":["Dipartimento di Fisica ed Astronomia and INFN---Istituto Nazionale Fisica Nucleare, Universit\u00e0 di Catania Via S. Sofia 64, 95123 Catania, Italy#TAB#"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Fisica ed Astronomia and INFN---Istituto Nazionale Fisica Nucleare, Universit\u00e0 di Catania Via S. Sofia 64, 95123 Catania, Italy#TAB#","institution_ids":["https://openalex.org/I4210116497"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026341152","display_name":"Gastone Castellani","orcid":"https://orcid.org/0000-0003-4892-925X"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"G. C. Castellani","raw_affiliation_strings":["C.I.G.---Centro Interdipartimentale 'L. Galvani' per Studi Integrati di Bioinformatica, Biofisica e Biocomplessit\u00e0, Universit\u00e0 di Bologna Via S.Giacomo 12, 40126, Bologna, Italy#TAB#"],"affiliations":[{"raw_affiliation_string":"C.I.G.---Centro Interdipartimentale 'L. Galvani' per Studi Integrati di Bioinformatica, Biofisica e Biocomplessit\u00e0, Universit\u00e0 di Bologna Via S.Giacomo 12, 40126, Bologna, Italy#TAB#","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048136336","display_name":"Massimo Marchiori","orcid":"https://orcid.org/0000-0002-4107-4132"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. Marchiori","raw_affiliation_strings":["W3C MIT Lab for Computer Science 545 Technology Square, Cambridge, MA 02139, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"W3C MIT Lab for Computer Science 545 Technology Square, Cambridge, MA 02139, USA#TAB#","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025807854","display_name":"Daniel Remondini","orcid":"https://orcid.org/0000-0003-3185-7456"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"D. Remondini","raw_affiliation_strings":["C.I.G.---Centro Interdipartimentale 'L. Galvani' per Studi Integrati di Bioinformatica, Biofisica e Biocomplessit\u00e0, Universit\u00e0 di Bologna Via S.Giacomo 12, 40126, Bologna, Italy#TAB#"],"affiliations":[{"raw_affiliation_string":"C.I.G.---Centro Interdipartimentale 'L. Galvani' per Studi Integrati di Bioinformatica, Biofisica e Biocomplessit\u00e0, Universit\u00e0 di Bologna Via S.Giacomo 12, 40126, Bologna, Italy#TAB#","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078302741","display_name":"Claudio Franceschi","orcid":"https://orcid.org/0000-0001-9841-6386"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"C. Franceschi","raw_affiliation_strings":["Dipartimento di Patologia Sperimentale, Universit\u00e0 di Bologna, Via San Giacomo 12, 40126 Bologna, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Patologia Sperimentale, Universit\u00e0 di Bologna, Via San Giacomo 12, 40126 Bologna, Italy","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5007136874"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.8014,"has_fulltext":false,"cited_by_count":41,"citation_normalized_percentile":{"value":0.8405901,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"21","issue":"8","first_page":"1639","last_page":"1643"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12391","display_name":"Artificial Immune Systems Applications","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.8172050714492798},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.6494220495223999},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5049906373023987},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41050124168395996},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32310929894447327},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.2797931432723999},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.1425948441028595}],"concepts":[{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.8172050714492798},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.6494220495223999},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5049906373023987},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41050124168395996},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32310929894447327},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2797931432723999},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.1425948441028595},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000938","descriptor_name":"Antigen-Presenting Cells","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000938","descriptor_name":"Antigen-Presenting Cells","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000938","descriptor_name":"Antigen-Presenting Cells","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D002450","descriptor_name":"Cell Communication","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008214","descriptor_name":"Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008214","descriptor_name":"Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008214","descriptor_name":"Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018448","descriptor_name":"Models, Immunological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018448","descriptor_name":"Models, Immunological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018448","descriptor_name":"Models, Immunological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018836","descriptor_name":"Inflammation Mediators","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018836","descriptor_name":"Inflammation Mediators","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018836","descriptor_name":"Inflammation Mediators","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bti239","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti239","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/21/8/1639/48973290/bioinformatics_21_8_1639.pdf","source":{"id":"https://openalex.org/S4210188263","display_name":"Computer applications in the biosciences","issn_l":"0266-7061","issn":["0266-7061","1460-2059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:15613387","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15613387","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:cris.unibo.it:11585/1208","is_oa":false,"landing_page_url":"http://hdl.handle.net/11585/1208","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:www.research.unipd.it:11577/2476484","is_oa":false,"landing_page_url":"http://hdl.handle.net/11577/2476484","pdf_url":null,"source":{"id":"https://openalex.org/S4306402547","display_name":"Padua Research Archive (University of Padova)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bti239","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti239","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/21/8/1639/48973290/bioinformatics_21_8_1639.pdf","source":{"id":"https://openalex.org/S4210188263","display_name":"Computer applications in the biosciences","issn_l":"0266-7061","issn":["0266-7061","1460-2059"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2114144373.pdf","grobid_xml":"https://content.openalex.org/works/W2114144373.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1558813989","https://openalex.org/W1975334114","https://openalex.org/W1982191305","https://openalex.org/W1982276233","https://openalex.org/W1983202741","https://openalex.org/W1990130369","https://openalex.org/W2002225831","https://openalex.org/W2009043082","https://openalex.org/W2010478496","https://openalex.org/W2012507063","https://openalex.org/W2030493262","https://openalex.org/W2035443953","https://openalex.org/W2056944867","https://openalex.org/W2060464767","https://openalex.org/W2071812591","https://openalex.org/W2082402714","https://openalex.org/W2114081392","https://openalex.org/W2124637492","https://openalex.org/W2124949080","https://openalex.org/W2130790725","https://openalex.org/W2136931666","https://openalex.org/W2144885342","https://openalex.org/W2145736817","https://openalex.org/W2153624566","https://openalex.org/W2156737316","https://openalex.org/W2160935161","https://openalex.org/W2187250072","https://openalex.org/W2921811239","https://openalex.org/W2949526662","https://openalex.org/W3103786587","https://openalex.org/W3204029142","https://openalex.org/W4253508991"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2117258802"],"abstract_inverted_index":{"claudio.franceschi@unibo.it.":[0]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-03-31T07:56:22.981413","created_date":"2025-10-10T00:00:00"}
