{"id":"https://openalex.org/W2126793841","doi":"https://doi.org/10.1093/bioinformatics/bti110","title":"The SBW\u2013MATLAB interface","display_name":"The SBW\u2013MATLAB interface","publication_year":2004,"publication_date":"2004-11-05","ids":{"openalex":"https://openalex.org/W2126793841","doi":"https://doi.org/10.1093/bioinformatics/bti110","mag":"2126793841","pmid":"https://pubmed.ncbi.nlm.nih.gov/15531613"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bti110","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti110","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003132902","display_name":"Cameron Wellock","orcid":null},"institutions":[{"id":"https://openalex.org/I90708416","display_name":"Keck Graduate Institute","ror":"https://ror.org/00f4jdp82","country_code":"US","type":"education","lineage":["https://openalex.org/I90708416"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cameron Wellock","raw_affiliation_strings":["Keck Graduate Institute Claremont, CA 91711, USA","Keck Graduate Institute, Claremont, CA 91711, USA"],"affiliations":[{"raw_affiliation_string":"Keck Graduate Institute Claremont, CA 91711, USA","institution_ids":["https://openalex.org/I90708416"]},{"raw_affiliation_string":"Keck Graduate Institute, Claremont, CA 91711, USA","institution_ids":["https://openalex.org/I90708416"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103362835","display_name":"Vijay Chickarmane","orcid":null},"institutions":[{"id":"https://openalex.org/I90708416","display_name":"Keck Graduate Institute","ror":"https://ror.org/00f4jdp82","country_code":"US","type":"education","lineage":["https://openalex.org/I90708416"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vijay Chickarmane","raw_affiliation_strings":["Keck Graduate Institute Claremont, CA 91711, USA","Keck Graduate Institute, Claremont, CA 91711, USA"],"affiliations":[{"raw_affiliation_string":"Keck Graduate Institute Claremont, CA 91711, USA","institution_ids":["https://openalex.org/I90708416"]},{"raw_affiliation_string":"Keck Graduate Institute, Claremont, CA 91711, USA","institution_ids":["https://openalex.org/I90708416"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044484291","display_name":"Herbert M. Sauro","orcid":"https://orcid.org/0000-0002-3659-6817"},"institutions":[{"id":"https://openalex.org/I90708416","display_name":"Keck Graduate Institute","ror":"https://ror.org/00f4jdp82","country_code":"US","type":"education","lineage":["https://openalex.org/I90708416"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Herbert M. Sauro","raw_affiliation_strings":["Keck Graduate Institute Claremont, CA 91711, USA","Keck Graduate Institute, Claremont, CA 91711, USA"],"affiliations":[{"raw_affiliation_string":"Keck Graduate Institute Claremont, CA 91711, USA","institution_ids":["https://openalex.org/I90708416"]},{"raw_affiliation_string":"Keck Graduate Institute, Claremont, CA 91711, USA","institution_ids":["https://openalex.org/I90708416"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5003132902"],"corresponding_institution_ids":["https://openalex.org/I90708416"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.0525,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.74553268,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"21","issue":"6","first_page":"823","last_page":"824"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7456292510032654},{"id":"https://openalex.org/keywords/matlab","display_name":"MATLAB","score":0.7091343998908997},{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.6285623908042908},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.626664936542511},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.6246508955955505},{"id":"https://openalex.org/keywords/workbench","display_name":"Workbench","score":0.6135762333869934},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6084234118461609},{"id":"https://openalex.org/keywords/download","display_name":"Download","score":0.5938462018966675},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5496307015419006},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.5400524735450745},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.5053403973579407},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.43479734659194946},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4222880005836487},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.41297629475593567},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.3800949454307556},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.21644437313079834},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.08441892266273499},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.07297524809837341}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7456292510032654},{"id":"https://openalex.org/C2780365114","wikidata":"https://www.wikidata.org/wiki/Q169478","display_name":"MATLAB","level":2,"score":0.7091343998908997},{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.6285623908042908},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.626664936542511},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.6246508955955505},{"id":"https://openalex.org/C2779145975","wikidata":"https://www.wikidata.org/wiki/Q347690","display_name":"Workbench","level":3,"score":0.6135762333869934},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6084234118461609},{"id":"https://openalex.org/C2780154274","wikidata":"https://www.wikidata.org/wiki/Q7126717","display_name":"Download","level":2,"score":0.5938462018966675},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5496307015419006},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.5400524735450745},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.5053403973579407},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.43479734659194946},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4222880005836487},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.41297629475593567},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3800949454307556},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.21644437313079834},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.08441892266273499},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.07297524809837341},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bti110","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bti110","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:15531613","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15531613","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":2,"referenced_works":["https://openalex.org/W1495660511","https://openalex.org/W2150908245"],"related_works":["https://openalex.org/W4311938462","https://openalex.org/W2355243308","https://openalex.org/W3123068371","https://openalex.org/W2046541848","https://openalex.org/W1993468508","https://openalex.org/W2786051832","https://openalex.org/W1993934436","https://openalex.org/W4220851998","https://openalex.org/W1561547804","https://openalex.org/W3118513743"],"abstract_inverted_index":{"The":[0],"SBW-MATLAB":[1],"Interface":[2],"allows":[3],"MATLAB":[4,32],"users":[5,33],"to":[6,34],"take":[7],"advantage":[8],"of":[9,13],"the":[10,18],"wide":[11],"variety":[12],"tools":[14,38],"available":[15],"through":[16],"SBW,":[17],"Systems":[19],"Biology":[20],"Workbench":[21],"(Sauro":[22],"et":[23],"al.":[24],"(2003)":[25],"OMICS,":[26],"7,":[27],"355-372).":[28],"It":[29],"also":[30],"enables":[31],"themselves":[35],"create":[36],"SBW-enabled":[37],"which":[39],"can":[40],"be":[41],"freely":[42],"distributed.":[43]},"counts_by_year":[{"year":2015,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
