{"id":"https://openalex.org/W2124165983","doi":"https://doi.org/10.1093/bioinformatics/bth462","title":"PIML: the Pathogen Information Markup Language","display_name":"PIML: the Pathogen Information Markup Language","publication_year":2004,"publication_date":"2004-08-05","ids":{"openalex":"https://openalex.org/W2124165983","doi":"https://doi.org/10.1093/bioinformatics/bth462","mag":"2124165983","pmid":"https://pubmed.ncbi.nlm.nih.gov/15297293"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bth462","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bth462","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024742201","display_name":"Yongqun He","orcid":"https://orcid.org/0000-0001-9189-9661"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yongqun He","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023666688","display_name":"Richard Vines","orcid":"https://orcid.org/0000-0003-4339-4997"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard R. Vines","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021998590","display_name":"Alice R. Wattam","orcid":"https://orcid.org/0000-0001-6018-6490"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alice R. Wattam","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078028818","display_name":"Georgiy V. Abramochkin","orcid":null},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Georgiy V. Abramochkin","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043792959","display_name":"Allan W. Dickerman","orcid":"https://orcid.org/0000-0003-0989-4998"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Allan W. Dickerman","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070316700","display_name":"J. Dana Eckart","orcid":null},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Dana Eckart","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058609337","display_name":"Bruno Sobral","orcid":"https://orcid.org/0000-0003-3908-577X"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bruno W. S. Sobral","raw_affiliation_strings":["Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University 1880 Pratt Drive, Blacksburg, VA 24061\u20130477, USA","institution_ids":["https://openalex.org/I859038795"]},{"raw_affiliation_string":"Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, 1880 Pratt Drive, Blacksburg, VA 24061-0477, USA","institution_ids":["https://openalex.org/I859038795"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5024742201"],"corresponding_institution_ids":["https://openalex.org/I859038795"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":null,"fwci":1.4837,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.80684217,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"21","issue":"1","first_page":"116","last_page":"121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.525600016117096,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.525600016117096,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11819","display_name":"Data-Driven Disease Surveillance","score":0.048900000751018524,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12492","display_name":"Zoonotic diseases and public health","score":0.04450000077486038,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interoperation","display_name":"Interoperation","score":0.8104698657989502},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7752753496170044},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.774584174156189},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.6936075091362},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.6905101537704468},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.6642117500305176},{"id":"https://openalex.org/keywords/html","display_name":"HTML","score":0.5010433197021484},{"id":"https://openalex.org/keywords/xhtml","display_name":"XHTML","score":0.4636007845401764},{"id":"https://openalex.org/keywords/ruleml","display_name":"RuleML","score":0.45940840244293213},{"id":"https://openalex.org/keywords/xquery","display_name":"XQuery","score":0.4339671730995178},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.276748389005661},{"id":"https://openalex.org/keywords/document-structure-description","display_name":"Document Structure Description","score":0.15598395466804504}],"concepts":[{"id":"https://openalex.org/C139458680","wikidata":"https://www.wikidata.org/wiki/Q12184942","display_name":"Interoperation","level":3,"score":0.8104698657989502},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7752753496170044},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.774584174156189},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.6936075091362},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.6905101537704468},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.6642117500305176},{"id":"https://openalex.org/C138708601","wikidata":"https://www.wikidata.org/wiki/Q8811","display_name":"HTML","level":3,"score":0.5010433197021484},{"id":"https://openalex.org/C189139006","wikidata":"https://www.wikidata.org/wiki/Q166074","display_name":"XHTML","level":4,"score":0.4636007845401764},{"id":"https://openalex.org/C196388810","wikidata":"https://www.wikidata.org/wiki/Q631877","display_name":"RuleML","level":5,"score":0.45940840244293213},{"id":"https://openalex.org/C2780512708","wikidata":"https://www.wikidata.org/wiki/Q850661","display_name":"XQuery","level":4,"score":0.4339671730995178},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.276748389005661},{"id":"https://openalex.org/C68699486","wikidata":"https://www.wikidata.org/wiki/Q265904","display_name":"Document Structure Description","level":3,"score":0.15598395466804504}],"mesh":[{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bth462","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bth462","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:15297293","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15297293","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Evaluation Study"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.100.180","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.100.180","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/cgi/reprint/bth462v1.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.47999998927116394}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W13024833","https://openalex.org/W1482582909","https://openalex.org/W1486540001","https://openalex.org/W1664954303","https://openalex.org/W1965014786","https://openalex.org/W2029543140","https://openalex.org/W2098811647","https://openalex.org/W2100702185","https://openalex.org/W2103129584","https://openalex.org/W2114049512","https://openalex.org/W2128353271","https://openalex.org/W2150908245","https://openalex.org/W6602499392"],"related_works":["https://openalex.org/W2187952378","https://openalex.org/W2211309320","https://openalex.org/W2774879466","https://openalex.org/W2580812415","https://openalex.org/W84371694","https://openalex.org/W1987495192","https://openalex.org/W1518743274","https://openalex.org/W2498118260","https://openalex.org/W3122008858","https://openalex.org/W1793355849"],"abstract_inverted_index":{"MOTIVATION:":[0],"A":[1,127],"vast":[2],"amount":[3],"of":[4,79,96,115],"information":[5,38,52,162],"about":[6],"human,":[7],"animal":[8],"and":[9,16,26,85,123,152],"plant":[10],"pathogens":[11,113],"has":[12],"been":[13],"acquired,":[14],"stored":[15],"displayed":[17],"in":[18],"varied":[19],"formats":[20],"through":[21,89],"different":[22],"resources,":[23],"both":[24],"electronically":[25],"otherwise.":[27],"However,":[28],"there":[29],"is":[30,66,163],"no":[31],"community":[32],"standard":[33],"format":[34,71],"for":[35,44,72,111],"organizing":[36],"this":[37],"or":[39,93],"agreement":[40],"on":[41],"machine-readable":[42],"format(s)":[43],"data":[45],"exchange,":[46],"thereby":[47],"hampering":[48],"interoperation":[49],"efforts":[50,142],"across":[51],"systems":[53],"harboring":[54],"such":[55],"infectious":[56],"disease":[57],"data.":[58],"RESULTS:":[59],"The":[60],"Pathogen":[61],"Information":[62],"Markup":[63],"Language":[64],"(PIML)":[65],"a":[67],"free,":[68],"open,":[69],"XML-based":[70],"representing":[73],"pathogen":[74],"information.":[75],"XSLT-based":[76],"visual":[77],"presentations":[78],"valid":[80],"PIML":[81,107,151,156],"documents":[82,108],"were":[83],"developed":[84],"can":[86],"be":[87],"accessed":[88],"the":[90,97,160],"PathInfo":[91],"website":[92],"as":[94,103,134,136],"part":[95],"interoperable":[98],"web":[99],"services":[100],"federation":[101],"known":[102],"ToolBus/PathPort.":[104],"Currently,":[105],"detailed":[106],"are":[109,143],"available":[110],"21":[112],"deemed":[114],"high":[116],"priority":[117],"with":[118],"regard":[119],"to":[120,146,153],"public":[121],"health":[122],"national":[124],"biological":[125],"defense.":[126],"dynamic":[128],"query":[129],"system":[130],"allows":[131],"simple":[132],"queries":[133],"well":[135],"comparisons":[137],"among":[138],"these":[139],"pathogens.":[140],"Continuing":[141],"being":[144],"taken":[145],"include":[147],"other":[148],"groups'":[149],"supporting":[150],"develop":[154],"more":[155],"documents.":[157],"AVAILABILITY:":[158],"All":[159],"PIML-related":[161],"accessible":[164],"from":[165],"http://www.vbi.vt.edu/pathport/pathinfo/":[166]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
