{"id":"https://openalex.org/W2108220975","doi":"https://doi.org/10.1093/bioinformatics/bth047","title":"Confirmation of data mining based predictions of protein function","display_name":"Confirmation of data mining based predictions of protein function","publication_year":2004,"publication_date":"2004-02-05","ids":{"openalex":"https://openalex.org/W2108220975","doi":"https://doi.org/10.1093/bioinformatics/bth047","mag":"2108220975","pmid":"https://pubmed.ncbi.nlm.nih.gov/14764546"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bth047","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bth047","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/20/7/1110/48905311/bioinformatics_20_7_1110.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/20/7/1110/48905311/bioinformatics_20_7_1110.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020822487","display_name":"Ross D. King","orcid":"https://orcid.org/0000-0001-7208-4387"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]},{"id":"https://openalex.org/I97429440","display_name":"University of Wales","ror":"https://ror.org/01se4f844","country_code":"GB","type":"education","lineage":["https://openalex.org/I97429440"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Ross D. King","raw_affiliation_strings":["Department of Computer Science, University of Wales, Aberystwyth, Wales, SY23 3DB, UK","Department of Computer Science, University of Wales Aberystwyth, Wales, SY23 3DB, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Wales, Aberystwyth, Wales, SY23 3DB, UK","institution_ids":["https://openalex.org/I16038530","https://openalex.org/I97429440"]},{"raw_affiliation_string":"Department of Computer Science, University of Wales Aberystwyth, Wales, SY23 3DB, UK#TAB#","institution_ids":["https://openalex.org/I16038530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016774506","display_name":"Paul H. Wise","orcid":"https://orcid.org/0000-0002-7380-4347"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]},{"id":"https://openalex.org/I97429440","display_name":"University of Wales","ror":"https://ror.org/01se4f844","country_code":"GB","type":"education","lineage":["https://openalex.org/I97429440"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Paul H. Wise","raw_affiliation_strings":["Department of Computer Science, University of Wales, Aberystwyth, Wales, SY23 3DB, UK","Department of Computer Science, University of Wales Aberystwyth, Wales, SY23 3DB, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Wales, Aberystwyth, Wales, SY23 3DB, UK","institution_ids":["https://openalex.org/I16038530","https://openalex.org/I97429440"]},{"raw_affiliation_string":"Department of Computer Science, University of Wales Aberystwyth, Wales, SY23 3DB, UK#TAB#","institution_ids":["https://openalex.org/I16038530"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072262751","display_name":"Amanda Clare","orcid":"https://orcid.org/0000-0001-8315-3659"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]},{"id":"https://openalex.org/I97429440","display_name":"University of Wales","ror":"https://ror.org/01se4f844","country_code":"GB","type":"education","lineage":["https://openalex.org/I97429440"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Amanda Clare","raw_affiliation_strings":["Department of Computer Science, University of Wales, Aberystwyth, Wales, SY23 3DB, UK","Department of Computer Science, University of Wales Aberystwyth, Wales, SY23 3DB, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Wales, Aberystwyth, Wales, SY23 3DB, UK","institution_ids":["https://openalex.org/I16038530","https://openalex.org/I97429440"]},{"raw_affiliation_string":"Department of Computer Science, University of Wales Aberystwyth, Wales, SY23 3DB, UK#TAB#","institution_ids":["https://openalex.org/I16038530"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5020822487"],"corresponding_institution_ids":["https://openalex.org/I16038530","https://openalex.org/I97429440"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.4759,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.80495606,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"20","issue":"7","first_page":"1110","last_page":"1118"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.23559999465942383,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.23559999465942383,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.17829999327659607,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.17409999668598175,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/orfs","display_name":"ORFS","score":0.9198938608169556},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6313781142234802},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5865827202796936},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.56833815574646},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.56059330701828},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.48271963000297546},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.47555631399154663},{"id":"https://openalex.org/keywords/voting","display_name":"Voting","score":0.4590553045272827},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.457735538482666},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40990644693374634},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3775801360607147},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3579036593437195},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23279744386672974},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20948469638824463},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.1952265501022339},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19118443131446838},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.16830557584762573}],"concepts":[{"id":"https://openalex.org/C2780530800","wikidata":"https://www.wikidata.org/wiki/Q7072921","display_name":"ORFS","level":5,"score":0.9198938608169556},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6313781142234802},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5865827202796936},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.56833815574646},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.56059330701828},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.48271963000297546},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.47555631399154663},{"id":"https://openalex.org/C520049643","wikidata":"https://www.wikidata.org/wiki/Q189760","display_name":"Voting","level":3,"score":0.4590553045272827},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.457735538482666},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40990644693374634},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3775801360607147},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3579036593437195},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23279744386672974},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20948469638824463},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.1952265501022339},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19118443131446838},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.16830557584762573},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bth047","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bth047","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/20/7/1110/48905311/bioinformatics_20_7_1110.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:14764546","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/14764546","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/3ad8f2c4-01de-4814-84dc-31b23bac3de2","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/3ad8f2c4-01de-4814-84dc-31b23bac3de2","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"King, R D, Wise, P H & Clare, A 2004, 'Confirmation of data mining based predictions of protein funtion', Bioinformatics, vol. 20, no. 7, pp. 1110-1118. https://doi.org/10.1093/bioinformatics/bth047","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.611.6479","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.611.6479","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/20/7/1110.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bth047","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bth047","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/20/7/1110/48905311/bioinformatics_20_7_1110.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6399999856948853,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1509280691","https://openalex.org/W1531358660","https://openalex.org/W1533936090","https://openalex.org/W1535487209","https://openalex.org/W1975658784","https://openalex.org/W1988433342","https://openalex.org/W1995117714","https://openalex.org/W2000488027","https://openalex.org/W2007816003","https://openalex.org/W2015292449","https://openalex.org/W2031585615","https://openalex.org/W2032838501","https://openalex.org/W2033323125","https://openalex.org/W2057494903","https://openalex.org/W2057885377","https://openalex.org/W2076274126","https://openalex.org/W2102794349","https://openalex.org/W2109715166","https://openalex.org/W2117436816","https://openalex.org/W2118892942","https://openalex.org/W2130925474","https://openalex.org/W2145454254","https://openalex.org/W2146312020","https://openalex.org/W2147169507","https://openalex.org/W2149607250","https://openalex.org/W2156630822","https://openalex.org/W2158714788","https://openalex.org/W2161012147","https://openalex.org/W2166575747"],"related_works":["https://openalex.org/W2017477982","https://openalex.org/W1978801575","https://openalex.org/W2029252138","https://openalex.org/W4306784270","https://openalex.org/W2101899141","https://openalex.org/W3031046715","https://openalex.org/W2017335389","https://openalex.org/W2358544099","https://openalex.org/W1976390578","https://openalex.org/W2072439611"],"abstract_inverted_index":{"MOTIVATION:":[0],"A":[1],"central":[2],"problem":[3],"in":[4],"bioinformatics":[5],"is":[6,21,47,53,92,232],"the":[7,106,128,137,150,159,201,206,224],"assignment":[8],"of":[9,70,105,108,144,161,175,180,203],"function":[10,107],"to":[11,79,101,121,200,212,234],"sequenced":[12],"open":[13,238],"reading":[14],"frames":[15],"(ORFs).":[16],"The":[17,190],"most":[18],"common":[19],"approach":[20],"based":[22,29,38,54,209],"on":[23,55,217],"inferred":[24],"homology":[25],"using":[26,94],"a":[27,68],"statistically":[28],"sequence":[30],"similarity":[31],"(SIM)":[32],"method,":[33],"e.g.":[34],"PSI-BLAST.":[35],"Alternative":[36],"non-SIM":[37,208],"bioinformatic":[39],"methods":[40],"are":[41,88],"becoming":[42],"popular.":[43],"One":[44],"such":[45],"method":[46,211],"Data":[48],"Mining":[49],"Prediction":[50],"(DMP).":[51],"This":[52,231],"combining":[56],"evidence":[57],"from":[58],"amino-acid":[59],"attributes,":[60],"predicted":[61],"structure":[62],"and":[63,66,76,135,157,245],"phylogenic":[64],"patterns;":[65],"uses":[67],"combination":[69],"Inductive":[71],"Logic":[72],"Programming":[73],"data":[74],"mining,":[75],"decision":[77],"trees":[78],"produce":[80],"prediction":[81,210],"rules":[82,192],"for":[83,140,227,240,242],"functional":[84,229],"class.":[85],"DMP":[86,98,151,182,191,198],"predictions":[87,104,183,241],"more":[89],"general":[90],"than":[91,169],"possible":[93],"homology.":[95],"In":[96],"2000/1,":[97],"was":[99],"used":[100],"make":[102],"public":[103],"1309":[109],"Escherichia":[110],"coli":[111],"ORFs.":[112],"Since":[113],"then":[114],"biological":[115,196],"knowledge":[116],"has":[117],"advanced":[118],"allowing":[119],"us":[120],"test":[122],"our":[123,204],"predictions.":[124,152,230],"RESULTS:":[125],"We":[126,221],"examined":[127,136],"updated":[129],"(20.02.02)":[130],"Riley":[131],"group":[132],"genome":[133],"annotation,":[134],"scientific":[138],"literature":[139],"direct":[141,188],"experimental":[142],"derivations":[143],"ORF":[145],"function.":[146],"Both":[147],"tests":[148],"confirmed":[149,186],"Accuracy":[153],"varied":[154],"between":[155],"rules,":[156,173],"with":[158],"detail":[160],"prediction,":[162],"but":[163],"they":[164],"were":[165,177],"generally":[166],"significantly":[167],"better":[168],"random.":[170],"For":[171],"voting":[172],"accuracies":[174],"75-100%":[176],"obtained.":[178],"Twenty-one":[179],"these":[181],"have":[184,194,213,222],"been":[185,214],"by":[187],"experimentation.":[189],"also":[193],"interesting":[195],"explanations.":[197],"is,":[199],"best":[202],"knowledge,":[205],"first":[207],"tested":[215],"directly":[216],"new":[218],"data.":[219],"AVAILABILITY:":[220],"designed":[223],"\"Genepredictions\"":[225],"database":[226],"protein":[228],"intended":[233],"act":[235],"as":[236],"an":[237],"repository":[239],"any":[243],"organism":[244],"can":[246],"be":[247],"accessed":[248],"at":[249],"http://www.genepredictions.org":[250]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
