{"id":"https://openalex.org/W2160919797","doi":"https://doi.org/10.1093/bioinformatics/btg407","title":"FGDP: functional genomics data pipeline for automated, multiple microarray data analyses","display_name":"FGDP: functional genomics data pipeline for automated, multiple microarray data analyses","publication_year":2004,"publication_date":"2004-01-20","ids":{"openalex":"https://openalex.org/W2160919797","doi":"https://doi.org/10.1093/bioinformatics/btg407","mag":"2160919797","pmid":"https://pubmed.ncbi.nlm.nih.gov/14734324"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btg407","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg407","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/20/2/282/48905127/bioinformatics_20_2_282.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/20/2/282/48905127/bioinformatics_20_2_282.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017266770","display_name":"Jeffrey D. Grant","orcid":null},"institutions":[{"id":"https://openalex.org/I1289437631","display_name":"Fox Chase Cancer Center","ror":"https://ror.org/0567t7073","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1289437631","https://openalex.org/I4210122924"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jeffrey D. Grant","raw_affiliation_strings":["Bioinformatics, Department of Information Science and Technology, Division of Basic Science, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA","Bioinformatics, Department of Information Science and Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology, Division of Basic Science, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA","institution_ids":["https://openalex.org/I1289437631"]},{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology#TAB#","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084632797","display_name":"Luke A. Somers","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Luke A. Somers","raw_affiliation_strings":["Bioinformatics, Department of Information Science and Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology#TAB#","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100333738","display_name":"Yue Zhang","orcid":"https://orcid.org/0000-0002-6327-5023"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yue Zhang","raw_affiliation_strings":["Bioinformatics, Department of Information Science and Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology#TAB#","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066605872","display_name":"Frank J. Manion","orcid":"https://orcid.org/0000-0003-1030-6348"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Frank J. Manion","raw_affiliation_strings":["Bioinformatics, Department of Information Science and Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology#TAB#","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073100067","display_name":"Ghislain Bidaut","orcid":"https://orcid.org/0000-0001-8502-2361"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ghislain Bidaut","raw_affiliation_strings":["Bioinformatics, Department of Information Science and Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology#TAB#","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014591184","display_name":"Michael F. Ochs","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael F. Ochs","raw_affiliation_strings":["Bioinformatics, Department of Information Science and Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Department of Information Science and Technology#TAB#","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5017266770"],"corresponding_institution_ids":["https://openalex.org/I1289437631"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.8382,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.71129902,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"20","issue":"2","first_page":"282","last_page":"283"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9283000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9283000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.00860000029206276,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.007600000128149986,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.710382878780365},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.698530912399292},{"id":"https://openalex.org/keywords/executable","display_name":"Executable","score":0.6795127391815186},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5964221358299255},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5387877225875854},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4785390794277191},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.44534391164779663},{"id":"https://openalex.org/keywords/functional-genomics","display_name":"Functional genomics","score":0.43019410967826843},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4043572247028351},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.3406713306903839},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3355207145214081},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.31832021474838257},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18244272470474243},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12015116214752197},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11155685782432556},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09639301896095276},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09185329079627991}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.710382878780365},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.698530912399292},{"id":"https://openalex.org/C160145156","wikidata":"https://www.wikidata.org/wiki/Q778586","display_name":"Executable","level":2,"score":0.6795127391815186},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5964221358299255},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5387877225875854},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4785390794277191},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.44534391164779663},{"id":"https://openalex.org/C161078062","wikidata":"https://www.wikidata.org/wiki/Q1068690","display_name":"Functional genomics","level":5,"score":0.43019410967826843},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4043572247028351},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.3406713306903839},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3355207145214081},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.31832021474838257},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18244272470474243},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12015116214752197},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11155685782432556},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09639301896095276},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09185329079627991}],"mesh":[{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003205","descriptor_name":"Computing Methodologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btg407","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg407","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/20/2/282/48905127/bioinformatics_20_2_282.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:14734324","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/14734324","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.923.7970","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.923.7970","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/20/2/282.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btg407","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg407","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/20/2/282/48905127/bioinformatics_20_2_282.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.4399999976158142}],"awards":[{"id":"https://openalex.org/G7031966244","display_name":null,"funder_award_id":"P30 CA006927","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G921727105","display_name":null,"funder_award_id":"CA06927","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320308109","display_name":"Pennsylvania Department of Health","ror":"https://ror.org/00ra1fg11"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W45534775","https://openalex.org/W119181768","https://openalex.org/W162636959","https://openalex.org/W343233802","https://openalex.org/W1649645444","https://openalex.org/W1976208596","https://openalex.org/W2000978503","https://openalex.org/W2019655981","https://openalex.org/W2044367627","https://openalex.org/W2071650644","https://openalex.org/W2093017030","https://openalex.org/W2099114361","https://openalex.org/W2102225468","https://openalex.org/W2158188865","https://openalex.org/W2163150036","https://openalex.org/W2409615753","https://openalex.org/W2611831635"],"related_works":["https://openalex.org/W2598672065","https://openalex.org/W1993817217","https://openalex.org/W1638297612","https://openalex.org/W2523911541","https://openalex.org/W4309247532","https://openalex.org/W2020634034","https://openalex.org/W3096946169","https://openalex.org/W2113128227","https://openalex.org/W3120610872","https://openalex.org/W4388247109"],"abstract_inverted_index":{"UNLABELLED:":[0],"Gene":[1],"expression":[2,20],"microarrays":[3],"and":[4,65,91,96,104],"oligonucleotide":[5],"GeneChips":[6],"have":[7],"provided":[8],"biologists":[9],"with":[10,31,47],"a":[11,16,26,93],"means":[12],"of":[13,22,28],"measuring,":[14],"in":[15,69],"single":[17,38],"experiment,":[18],"the":[19,43,54,62,109],"levels":[21],"entire":[23],"genomes":[24],"under":[25,108],"variety":[27],"conditions.":[29],"As":[30],"any":[32],"nascent":[33],"field,":[34],"there":[35],"is":[36],"no":[37],"accepted":[39],"method":[40],"for":[41,98],"analyzing":[42],"new":[44,48,55],"data":[45,68,75],"types,":[46],"methods":[49],"appearing":[50],"monthly.":[51],"Investigators":[52],"using":[53],"technology":[56],"must":[57],"constantly":[58],"seek":[59],"access":[60],"to":[61,87],"latest":[63],"tools":[64],"explore":[66],"their":[67],"multiple":[70],"ways.":[71],"The":[72],"functional":[73],"genomics":[74],"pipeline":[76],"provides":[77,92],"an":[78],"integrated,":[79],"extendable":[80],"analysis":[81],"environment":[82],"permitting":[83],"multiple,":[84],"simultaneous":[85],"analyses":[86],"be":[88],"automatically":[89],"performed":[90],"web":[94],"server":[95],"interface":[97],"presenting":[99],"results.":[100],"AVAILABILITY:":[101],"Source":[102],"code":[103],"executables":[105],"are":[106],"available":[107],"GNU":[110],"public":[111],"license":[112],"at":[113],"http://bioinformatics.fccc.edu/":[114]},"counts_by_year":[],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}