{"id":"https://openalex.org/W2104040212","doi":"https://doi.org/10.1093/bioinformatics/btg139","title":"GeneComber: combining outputs of gene prediction programs for improved results","display_name":"GeneComber: combining outputs of gene prediction programs for improved results","publication_year":2003,"publication_date":"2003-06-30","ids":{"openalex":"https://openalex.org/W2104040212","doi":"https://doi.org/10.1093/bioinformatics/btg139","mag":"2104040212","pmid":"https://pubmed.ncbi.nlm.nih.gov/12835277"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btg139","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg139","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/10/1296/48903834/bioinformatics_19_10_1296.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/19/10/1296/48903834/bioinformatics_19_10_1296.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033441782","display_name":"Sohrab P. Shah","orcid":"https://orcid.org/0000-0001-6402-523X"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Sohrab P. Shah","raw_affiliation_strings":["UBC Bioinformatics Centre, University of British Columbia, 950 28th Ave W, Vancouver, BC V5Z4H4 Canada"],"affiliations":[{"raw_affiliation_string":"UBC Bioinformatics Centre, University of British Columbia, 950 28th Ave W, Vancouver, BC V5Z4H4 Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104581798","display_name":"Graham P. McVicker","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Graham P. McVicker","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079331774","display_name":"Alan K. Mackworth","orcid":"https://orcid.org/0000-0003-0380-105X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alan K. Mackworth","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001626311","display_name":"Sanja Rogi\u0107","orcid":"https://orcid.org/0000-0002-9988-3661"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sanja Rogic","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5026853900","display_name":"B. F. Francis Ouellette","orcid":"https://orcid.org/0000-0003-4676-675X"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"B. F. Francis Ouellette","raw_affiliation_strings":["University of British Columbia"],"affiliations":[{"raw_affiliation_string":"University of British Columbia","institution_ids":["https://openalex.org/I141945490"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5033441782"],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.9988,"has_fulltext":false,"cited_by_count":33,"citation_normalized_percentile":{"value":0.73927056,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"19","issue":"10","first_page":"1296","last_page":"1297"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8114829063415527},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.7102522253990173},{"id":"https://openalex.org/keywords/perl","display_name":"Perl","score":0.6063871383666992},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5454363226890564},{"id":"https://openalex.org/keywords/frame","display_name":"Frame (networking)","score":0.5157887935638428},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.5027377605438232},{"id":"https://openalex.org/keywords/relational-database-management-system","display_name":"Relational database management system","score":0.49734094738960266},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4786578416824341},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.47602373361587524},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.46538060903549194},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.44881126284599304},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4396496117115021},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.4140670597553253},{"id":"https://openalex.org/keywords/application-programming-interface","display_name":"Application programming interface","score":0.4124208390712738},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3962666392326355},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.27648431062698364},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.26111340522766113}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8114829063415527},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.7102522253990173},{"id":"https://openalex.org/C2777002779","wikidata":"https://www.wikidata.org/wiki/Q42478","display_name":"Perl","level":2,"score":0.6063871383666992},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5454363226890564},{"id":"https://openalex.org/C126042441","wikidata":"https://www.wikidata.org/wiki/Q1324888","display_name":"Frame (networking)","level":2,"score":0.5157887935638428},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.5027377605438232},{"id":"https://openalex.org/C24394798","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database management system","level":3,"score":0.49734094738960266},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4786578416824341},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.47602373361587524},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.46538060903549194},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.44881126284599304},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4396496117115021},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.4140670597553253},{"id":"https://openalex.org/C99613125","wikidata":"https://www.wikidata.org/wiki/Q165194","display_name":"Application programming interface","level":2,"score":0.4124208390712738},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3962666392326355},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.27648431062698364},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.26111340522766113},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019146","descriptor_name":"Hypermedia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019146","descriptor_name":"Hypermedia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019146","descriptor_name":"Hypermedia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btg139","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg139","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/10/1296/48903834/bioinformatics_19_10_1296.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:12835277","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12835277","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btg139","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg139","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/10/1296/48903834/bioinformatics_19_10_1296.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.47999998927116394,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2104040212.pdf","grobid_xml":"https://content.openalex.org/works/W2104040212.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W1606770439","https://openalex.org/W2131581981","https://openalex.org/W2138379687","https://openalex.org/W2150934173","https://openalex.org/W2158304452","https://openalex.org/W2166187656"],"related_works":["https://openalex.org/W2505630977","https://openalex.org/W2383709723","https://openalex.org/W2748529818","https://openalex.org/W2626533837","https://openalex.org/W2163438384","https://openalex.org/W2375584934","https://openalex.org/W1575529579","https://openalex.org/W2525788546","https://openalex.org/W2761120596","https://openalex.org/W1988380406"],"abstract_inverted_index":{"The":[0,12],"GeneComber":[1],"public":[2],"web":[3],"interface":[4],"and":[5,23],"supplementary":[6],"information":[7],"is":[8,15,24],"located":[9],"at":[10,26],"http://bioinformatics.ubc.ca/genecomber":[11],"source":[13],"code":[14],"released":[16],"under":[17],"the":[18],"GNU":[19],"General":[20],"Public":[21],"License":[22],"available":[25],"ftp://ftp.bioinformatics.ubc.ca/pub/genecomber/software.":[27]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
