{"id":"https://openalex.org/W2124815120","doi":"https://doi.org/10.1093/bioinformatics/btg037","title":"Greedy mixture learning for multiple motif discoveryin biological sequences","display_name":"Greedy mixture learning for multiple motif discoveryin biological sequences","publication_year":2003,"publication_date":"2003-03-21","ids":{"openalex":"https://openalex.org/W2124815120","doi":"https://doi.org/10.1093/bioinformatics/btg037","mag":"2124815120","pmid":"https://pubmed.ncbi.nlm.nih.gov/12651719"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btg037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg037","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/5/607/48904216/bioinformatics_19_5_607.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/19/5/607/48904216/bioinformatics_19_5_607.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051092577","display_name":"Konstantinos Blekas","orcid":"https://orcid.org/0000-0003-1085-8177"},"institutions":[{"id":"https://openalex.org/I194019607","display_name":"University of Ioannina","ror":"https://ror.org/01qg3j183","country_code":"GR","type":"education","lineage":["https://openalex.org/I194019607"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Konstantinos Blekas","raw_affiliation_strings":["Department of Computer Science, University of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and Technology, Hellas, 45110 Ioannina, Greece","Department of Computer Science, University#N#of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and #N#Technology, Hellas, 45110 Ioannina, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and Technology, Hellas, 45110 Ioannina, Greece","institution_ids":["https://openalex.org/I194019607"]},{"raw_affiliation_string":"Department of Computer Science, University#N#of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and #N#Technology, Hellas, 45110 Ioannina, Greece","institution_ids":["https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037813012","display_name":"Dimitrios I. Fotiadis","orcid":"https://orcid.org/0000-0002-7362-5082"},"institutions":[{"id":"https://openalex.org/I194019607","display_name":"University of Ioannina","ror":"https://ror.org/01qg3j183","country_code":"GR","type":"education","lineage":["https://openalex.org/I194019607"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Dimitrios I. Fotiadis","raw_affiliation_strings":["Department of Computer Science, University of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and Technology, Hellas, 45110 Ioannina, Greece","Department of Computer Science, University#N#of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and #N#Technology, Hellas, 45110 Ioannina, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and Technology, Hellas, 45110 Ioannina, Greece","institution_ids":["https://openalex.org/I194019607"]},{"raw_affiliation_string":"Department of Computer Science, University#N#of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and #N#Technology, Hellas, 45110 Ioannina, Greece","institution_ids":["https://openalex.org/I8901234"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007939716","display_name":"Aristidis Likas","orcid":"https://orcid.org/0000-0003-3170-5428"},"institutions":[{"id":"https://openalex.org/I194019607","display_name":"University of Ioannina","ror":"https://ror.org/01qg3j183","country_code":"GR","type":"education","lineage":["https://openalex.org/I194019607"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Aristidis Likas","raw_affiliation_strings":["Department of Computer Science, University of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and Technology, Hellas, 45110 Ioannina, Greece","Department of Computer Science, University#N#of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and #N#Technology, Hellas, 45110 Ioannina, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and Technology, Hellas, 45110 Ioannina, Greece","institution_ids":["https://openalex.org/I194019607"]},{"raw_affiliation_string":"Department of Computer Science, University#N#of Ioannina 45110 Ioannina, Greece and Biomedical Research Institute, Foundation for Research and #N#Technology, Hellas, 45110 Ioannina, Greece","institution_ids":["https://openalex.org/I8901234"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.9384,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.85722813,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"19","issue":"5","first_page":"607","last_page":"617"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.501800000667572,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.501800000667572,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.11819999665021896,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.08349999785423279,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/initialization","display_name":"Initialization","score":0.8112293481826782},{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.8087016344070435},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6955255270004272},{"id":"https://openalex.org/keywords/maximization","display_name":"Maximization","score":0.5725605487823486},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5247761607170105},{"id":"https://openalex.org/keywords/expectation\u2013maximization-algorithm","display_name":"Expectation\u2013maximization algorithm","score":0.4610547125339508},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4604613780975342},{"id":"https://openalex.org/keywords/greedy-algorithm","display_name":"Greedy algorithm","score":0.43832096457481384},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3512130379676819},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.31243863701820374},{"id":"https://openalex.org/keywords/maximum-likelihood","display_name":"Maximum likelihood","score":0.2413206696510315},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18578800559043884},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.1610487997531891}],"concepts":[{"id":"https://openalex.org/C114466953","wikidata":"https://www.wikidata.org/wiki/Q6034165","display_name":"Initialization","level":2,"score":0.8112293481826782},{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.8087016344070435},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6955255270004272},{"id":"https://openalex.org/C2776330181","wikidata":"https://www.wikidata.org/wiki/Q18358244","display_name":"Maximization","level":2,"score":0.5725605487823486},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5247761607170105},{"id":"https://openalex.org/C182081679","wikidata":"https://www.wikidata.org/wiki/Q1275153","display_name":"Expectation\u2013maximization algorithm","level":3,"score":0.4610547125339508},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4604613780975342},{"id":"https://openalex.org/C51823790","wikidata":"https://www.wikidata.org/wiki/Q504353","display_name":"Greedy algorithm","level":2,"score":0.43832096457481384},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3512130379676819},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.31243863701820374},{"id":"https://openalex.org/C49781872","wikidata":"https://www.wikidata.org/wiki/Q1045555","display_name":"Maximum likelihood","level":2,"score":0.2413206696510315},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18578800559043884},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.1610487997531891},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btg037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg037","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/5/607/48904216/bioinformatics_19_5_607.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:12651719","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12651719","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.3.7244","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.3.7244","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.uoi.gr/~kblekas/./papers/Bio_Greedy.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btg037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btg037","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/19/5/607/48904216/bioinformatics_19_5_607.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.7099999785423279,"id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W123092318","https://openalex.org/W1567468271","https://openalex.org/W1570876803","https://openalex.org/W1579271636","https://openalex.org/W1981367467","https://openalex.org/W1998300401","https://openalex.org/W2003144438","https://openalex.org/W2003967338","https://openalex.org/W2009566340","https://openalex.org/W2009570821","https://openalex.org/W2028903194","https://openalex.org/W2049633694","https://openalex.org/W2056002855","https://openalex.org/W2084787613","https://openalex.org/W2090398718","https://openalex.org/W2100736366","https://openalex.org/W2117019496","https://openalex.org/W2129995544","https://openalex.org/W2131510173","https://openalex.org/W2140136927","https://openalex.org/W2152893838","https://openalex.org/W2162828041","https://openalex.org/W2165558283","https://openalex.org/W2166086559","https://openalex.org/W2168227362","https://openalex.org/W2464161892","https://openalex.org/W2916193864"],"related_works":["https://openalex.org/W2891776881","https://openalex.org/W2078124810","https://openalex.org/W2244559970","https://openalex.org/W2041758614","https://openalex.org/W189876032","https://openalex.org/W2557467218","https://openalex.org/W3090561264","https://openalex.org/W2536297025","https://openalex.org/W1976188970","https://openalex.org/W2771290394"],"abstract_inverted_index":{"MOTIVATION:":[0],"This":[1],"paper":[2],"studies":[3],"the":[4,76,83,93,109],"problem":[5],"of":[6,19,31,53,102,117,120],"discovering":[7],"subsequences,":[8],"known":[9],"as":[10],"motifs,":[11],"that":[12,108],"are":[13],"common":[14],"to":[15,44,81],"a":[16,24,29,41,45,50,65],"given":[17],"collection":[18],"related":[20],"biosequences,":[21],"by":[22,48,133],"proposing":[23],"greedy":[25],"algorithm":[26,110],"for":[27,58,74],"learning":[28],"mixture":[30,46],"motifs":[32,118],"model":[33,47],"through":[34],"likelihood":[35],"maximization.":[36],"The":[37,87],"approach":[38,96],"adds":[39],"sequentially":[40],"new":[42],"motif":[43],"performing":[49],"combined":[51],"scheme":[52,68],"global":[54,84],"and":[55,97],"local":[56],"search":[57],"appropriately":[59],"initializing":[60],"its":[61],"parameters.":[62],"In":[63,126],"addition,":[64,127],"hierarchical":[66],"partitioning":[67,75],"based":[69],"on":[70],"kd-trees":[71],"is":[72,111],"presented":[73],"input":[77],"dataset":[78],"in":[79,113],"order":[80],"speed-up":[82],"searching":[85],"procedure.":[86],"proposed":[88],"method":[89],"compares":[90],"favorably":[91],"over":[92],"well-known":[94],"MEME":[95],"treats":[98],"successfully":[99],"several":[100],"drawbacks":[101],"MEME.":[103],"RESULTS:":[104],"Experimental":[105],"results":[106],"indicate":[107],"advantageous":[112],"identifying":[114],"larger":[115],"groups":[116],"characteristic":[119],"biological":[121],"families":[122],"with":[123,139],"significant":[124],"conservation.":[125],"it":[128],"offers":[129],"better":[130],"diagnostic":[131],"capabilities":[132],"building":[134],"more":[135],"powerful":[136],"statistical":[137],"motif-models":[138],"improved":[140],"classification":[141],"accuracy.":[142]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
