{"id":"https://openalex.org/W4410043870","doi":"https://doi.org/10.1093/bioinformatics/btag344","title":"Evaluation of epistasis detection methods for quantitative phenotypes","display_name":"Evaluation of epistasis detection methods for quantitative phenotypes","publication_year":2026,"publication_date":"2026-06-01","ids":{"openalex":"https://openalex.org/W4410043870","doi":"https://doi.org/10.1093/bioinformatics/btag344","pmid":"https://pubmed.ncbi.nlm.nih.gov/40463086"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btag344","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag344","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btag344","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055052838","display_name":"Stanislav Listopad","orcid":"https://orcid.org/0000-0002-7983-7879"},"institutions":[{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Stanislav Listopad","raw_affiliation_strings":["Department of Neuroscience, The Scripps Research Institute , La Jolla, CA 92037,"],"raw_orcid":"https://orcid.org/0000-0002-7983-7879","affiliations":[{"raw_affiliation_string":"Department of Neuroscience, The Scripps Research Institute , La Jolla, CA 92037,","institution_ids":["https://openalex.org/I123431417"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5117594311","display_name":"Gauri Renjith","orcid":null},"institutions":[{"id":"https://openalex.org/I160856358","display_name":"University of San Diego","ror":"https://ror.org/03jbbze48","country_code":"US","type":"education","lineage":["https://openalex.org/I160856358"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gauri Renjith","raw_affiliation_strings":["Department of Computer Science and Engineering, University of California , San Diego, CA 92093,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of California , San Diego, CA 92093,","institution_ids":["https://openalex.org/I160856358","https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102198621","display_name":"Qian Peng","orcid":"https://orcid.org/0009-0008-0467-3137"},"institutions":[{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Qian Peng","raw_affiliation_strings":["Department of Neuroscience, The Scripps Research Institute , La Jolla, CA 92037,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neuroscience, The Scripps Research Institute , La Jolla, CA 92037,","institution_ids":["https://openalex.org/I123431417"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055052838","https://openalex.org/A5102198621"],"corresponding_institution_ids":["https://openalex.org/I123431417"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00232618,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"42","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.45339998602867126,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.45339998602867126,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14393","display_name":"Health, Environment, Cognitive Aging","score":0.05139999836683273,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11337","display_name":"Tryptophan and brain disorders","score":0.03889999911189079,"subfield":{"id":"https://openalex.org/subfields/2803","display_name":"Biological Psychiatry"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epistasis","display_name":"Epistasis","score":0.8360247611999512},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.5554258227348328},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47787681221961975},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.38772159814834595},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.32206961512565613},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25805988907814026},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14604142308235168}],"concepts":[{"id":"https://openalex.org/C61727976","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Epistasis","level":3,"score":0.8360247611999512},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.5554258227348328},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47787681221961975},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.38772159814834595},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.32206961512565613},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25805988907814026},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14604142308235168}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btag344","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag344","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"doi:10.1101/2025.04.30.651312","is_oa":true,"landing_page_url":"https://doi.org/10.1101/2025.04.30.651312","pdf_url":"https://www.biorxiv.org/content/biorxiv/early/2025/05/01/2025.04.30.651312.full.pdf","source":{"id":"https://openalex.org/S4306402567","display_name":"bioRxiv (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"bioRxiv","raw_type":"posted-content"},{"id":"pmid:40463086","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40463086","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"bioRxiv : the preprint server for biology","raw_type":null},{"id":"pmid:42241225","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42241225","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:10946048","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12132564","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:13264488","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13264488/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btag344","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag344","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1020259976","display_name":null,"funder_award_id":"U01DA041134","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G1171554859","display_name":null,"funder_award_id":"U01DA051038","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G1302949710","display_name":null,"funder_award_id":"T32 AA007456","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1380632597","display_name":null,"funder_award_id":"U01DA050987","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1436251778","display_name":null,"funder_award_id":"U01DA041120","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G1453274132","display_name":null,"funder_award_id":"U24DA041147","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1742849658","display_name":null,"funder_award_id":"U01DA051018","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G1806936822","display_name":null,"funder_award_id":"U01DA041120","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1837870671","display_name":null,"funder_award_id":"U01DA051038","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G1876159678","display_name":null,"funder_award_id":"U24DA041147","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G2002922973","display_name":null,"funder_award_id":"AA007456","funder_id":"https://openalex.org/F4320337330","funder_display_name":"National Institute on Alcohol Abuse and Alcoholism"},{"id":"https://openalex.org/G2311639730","display_name":null,"funder_award_id":"U24DA041123","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2338281217","display_name":null,"funder_award_id":"U01DA050989","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2560325926","display_name":null,"funder_award_id":"U01DA050987","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G2715786902","display_name":null,"funder_award_id":"U01DA050988","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G2784032578","display_name":null,"funder_award_id":"U01DA050988","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2995001478","display_name":null,"funder_award_id":"U01DA051039","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2998093352","display_name":null,"funder_award_id":"U01DA041028","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G3438786812","display_name":null,"funder_award_id":"U01DA041134","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G3563224455","display_name":null,"funder_award_id":"U01DA051016","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G3690857051","display_name":null,"funder_award_id":"U01DA041089","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3725717719","display_name":null,"funder_award_id":"DP1 DA054373","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G3738900353","display_name":null,"funder_award_id":"U01DA041089","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G3789243368","display_name":null,"funder_award_id":"AA007456","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4066048162","display_name":null,"funder_award_id":"U01DA041089","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G4224028497","display_name":null,"funder_award_id":"U01DA041048","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G4241744443","display_name":null,"funder_award_id":"U01DA051016","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G4339412428","display_name":null,"funder_award_id":"U01DA041148","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G4428288514","display_name":null,"funder_award_id":"U01DA041022","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4643891584","display_name":null,"funder_award_id":"U01DA041156","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G469525291","display_name":null,"funder_award_id":"U01DA051037","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G4752599457","display_name":null,"funder_award_id":"U01DA041174","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4913917343","display_name":null,"funder_award_id":"U24DA041123","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G5002640097","display_name":null,"funder_award_id":"U01DA050988","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G5081895789","display_name":null,"funder_award_id":"U01DA041022","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G5121803199","display_name":null,"funder_award_id":"T32 AA007456","funder_id":"https://openalex.org/F4320337330","funder_display_name":"National Institute on Alcohol Abuse and Alcoholism"},{"id":"https://openalex.org/G5139799579","display_name":null,"funder_award_id":"U01DA041093","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G5190689617","display_name":null,"funder_award_id":"U01DA041174","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G5358798899","display_name":null,"funder_award_id":"U01DA051037","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5666110160","display_name":null,"funder_award_id":"U01DA041106","funder_id":"https://openalex.org/F4320337330","funder_display_name":"National Institute on Alcohol Abuse and Alcoholism"},{"id":"https://openalex.org/G5711293050","display_name":null,"funder_award_id":"DA054373","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G6075018537","display_name":null,"funder_award_id":"U01DA041093","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G609047695","display_name":null,"funder_award_id":"U01DA041148","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G6287805013","display_name":null,"funder_award_id":"U01DA041025","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G634314130","display_name":null,"funder_award_id":"U01DA051018","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6343599670","display_name":null,"funder_award_id":"U01DA041156","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G6405029640","display_name":null,"funder_award_id":"U01DA041048","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6413530154","display_name":null,"funder_award_id":"U01DA041106","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G687916792","display_name":null,"funder_award_id":"U01DA041156","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G6887863799","display_name":null,"funder_award_id":"U01DA041025","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G6922259526","display_name":null,"funder_award_id":"U01DA051039","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G6945432325","display_name":null,"funder_award_id":"U01DA041093","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6983123888","display_name":null,"funder_award_id":"U01DA051039","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G7005587430","display_name":null,"funder_award_id":"U01DA041117","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7033331757","display_name":null,"funder_award_id":"U01DA050989","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G7118917323","display_name":null,"funder_award_id":"U01DA041048","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G717911792","display_name":null,"funder_award_id":"U01DA051016","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7297353144","display_name":null,"funder_award_id":"U01DA041148","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7316485054","display_name":null,"funder_award_id":"U01DA041117","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G73412920","display_name":null,"funder_award_id":"U01DA041106","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7350205685","display_name":null,"funder_award_id":"U01DA041022","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G7383123020","display_name":null,"funder_award_id":"U01DA041174","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G7615176427","display_name":null,"funder_award_id":"U01DA041117","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G7652160222","display_name":null,"funder_award_id":"U24DA041147","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G7732922048","display_name":null,"funder_award_id":"U01DA041025","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7816880612","display_name":null,"funder_award_id":"U01DA041134","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8302419370","display_name":null,"funder_award_id":"U01DA051038","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G844719755","display_name":null,"funder_award_id":"U24DA041123","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G847352610","display_name":null,"funder_award_id":"U01DA050987","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G8629744604","display_name":null,"funder_award_id":"U01DA051018","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G8679417706","display_name":null,"funder_award_id":"U01DA050989","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G8760994838","display_name":null,"funder_award_id":"U01DA041106","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G8762821959","display_name":null,"funder_award_id":"U01DA041120","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G8865478933","display_name":null,"funder_award_id":"U01DA051037","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G923039674","display_name":null,"funder_award_id":"U01DA041028","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G977653892","display_name":null,"funder_award_id":"DP1 DA054373","funder_id":"https://openalex.org/F4320337330","funder_display_name":"National Institute on Alcohol Abuse and Alcoholism"},{"id":"https://openalex.org/G983282301","display_name":null,"funder_award_id":"U01DA041028","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337330","display_name":"National Institute on Alcohol Abuse and Alcoholism","ror":"https://ror.org/02jzrsm59"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"},{"id":"https://openalex.org/F4320337347","display_name":"National Institute on Drug Abuse","ror":"https://ror.org/00fq5cm18"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W1596936080","https://openalex.org/W1868492295","https://openalex.org/W1966360257","https://openalex.org/W1977437520","https://openalex.org/W1980991473","https://openalex.org/W1996838604","https://openalex.org/W2030150836","https://openalex.org/W2042688172","https://openalex.org/W2058401000","https://openalex.org/W2062533676","https://openalex.org/W2094587452","https://openalex.org/W2114099412","https://openalex.org/W2118556950","https://openalex.org/W2123368493","https://openalex.org/W2125858955","https://openalex.org/W2138896478","https://openalex.org/W2152325859","https://openalex.org/W2154572047","https://openalex.org/W2156064982","https://openalex.org/W2161633633","https://openalex.org/W2167638767","https://openalex.org/W2171677905","https://openalex.org/W2202610979","https://openalex.org/W2284353620","https://openalex.org/W2303043072","https://openalex.org/W2614018979","https://openalex.org/W2792910619","https://openalex.org/W2801490189","https://openalex.org/W2808449932","https://openalex.org/W2886585140","https://openalex.org/W2902741907","https://openalex.org/W2923868806","https://openalex.org/W2949922395","https://openalex.org/W2957716984","https://openalex.org/W2982291262","https://openalex.org/W3015863643","https://openalex.org/W3035624610","https://openalex.org/W3040634151","https://openalex.org/W3093203336","https://openalex.org/W3195285310","https://openalex.org/W3200111252","https://openalex.org/W4213196016","https://openalex.org/W4229079875","https://openalex.org/W4249213982","https://openalex.org/W4295903620","https://openalex.org/W4298148423","https://openalex.org/W4308708698","https://openalex.org/W4313880112","https://openalex.org/W4376111185","https://openalex.org/W4376868470","https://openalex.org/W4388252815","https://openalex.org/W4391016912","https://openalex.org/W4391913636","https://openalex.org/W4392154471","https://openalex.org/W4399515682","https://openalex.org/W4402027424","https://openalex.org/W4404516811","https://openalex.org/W4405855303","https://openalex.org/W4405874929","https://openalex.org/W4405907369"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189"],"abstract_inverted_index":{"MOTIVATION:":[0],"Epistasis,":[1,59,62],"or":[2],"genetic":[3,23,194],"interaction,":[4],"plays":[5],"a":[6,158],"crucial":[7],"role":[8],"in":[9,22,32,199,227],"shaping":[10],"complex":[11],"traits":[12],"and":[13,46,64,83,89,125,179,187,237],"has":[14,28],"been":[15,29],"increasingly":[16],"recognized":[17],"for":[18,135,148],"its":[19,35],"widespread":[20],"influence":[21],"architectures.":[24],"While":[25],"epistasis":[26,49],"detection":[27,50,111,210,216],"extensively":[30],"evaluated":[31,47,154],"case-control":[33],"studies,":[34],"performance":[36,134,201],"with":[37,116,122,191],"quantitative":[38,54,228],"phenotypes":[39],"remains":[40],"comparatively":[41],"understudied.":[42],"RESULTS:":[43],"We":[44,85,152],"identified":[45,182],"six":[48],"methods":[51,140,156],"applicable":[52],"to":[53,163,170],"trait":[55,229],"analysis:":[56],"EpiSNP,":[57],"Matrix":[58],"MIDESP,":[60],"PLINK":[61,177,180],"QMDR,":[63],"REMMA.":[65],"Using":[66],"the":[67,97,108,132,155,164,172,185,197],"EpiGEN":[68],"simulator,":[69],"we":[70],"generated":[71],"synthetic":[72],"datasets":[73,239],"modeling":[74],"four":[75],"classes":[76],"of":[77,96],"pairwise":[78],"SNP":[79],"interactions-dominant,":[80],"multiplicative,":[81],"recessive,":[82],"XOR.":[84],"also":[86],"assessed":[87],"BOOST":[88,142,181],"MDR":[90,120],"algorithms":[91,217],"using":[92,157],"discretized":[93],"(case-control)":[94],"versions":[95],"same":[98],"datasets.":[99],"Performance":[100],"varied":[101],"notably":[102],"by":[103],"interaction":[104,150,203],"type:":[105],"REMMA":[106],"achieved":[107],"highest":[109],"overall":[110],"rate":[112],"(55%),":[113],"particularly":[114],"excelling":[115],"dominant":[117],"interactions":[118,137],"(100%).":[119],"excelled":[121],"multiplicative":[123],"(57%)":[124],"XOR":[126],"(69%)":[127],"interactions.":[128],"Meanwhile,":[129],"EpiSNP":[130],"attained":[131],"best":[133],"recessive":[136],"(67%).":[138],"All":[139,234],"except":[141],"produced":[143],"F1":[144],"scores":[145],"below":[146],"0.05":[147],"most":[149],"types.":[151],"further":[153],"real-world":[159],"dataset.":[160],"When":[161],"applied":[162],"Adolescent":[165],"Brain":[166],"Cognitive":[167],"Development":[168],"dataset":[169],"analyse":[171],"externalizing":[173],"behavior":[174],"phenotype,":[175],"both":[176],"Epistasis":[178],"SNPs":[183],"within":[184],"DRD2":[186],"DRD4":[188],"genes,":[189],"consistent":[190],"previously":[192],"reported":[193],"associations.":[195],"Given":[196],"variability":[198],"tool":[200],"across":[202,211],"types,":[204],"no":[205],"single":[206],"method":[207],"provides":[208],"optimal":[209],"all":[212],"scenarios.":[213],"Leveraging":[214],"multiple":[215],"may":[218],"therefore":[219],"yield":[220],"more":[221],"comprehensive":[222],"insights":[223],"into":[224],"epistatic":[225],"effects":[226],"analyses.":[230],"AVAILABILITY":[231],"AND":[232],"IMPLEMENTATION:":[233],"relevant":[235],"code":[236],"simulated":[238],"can":[240],"be":[241],"found":[242],"at":[243],"github.com/staslist/Epistasis_Review":[244],"repository.":[245]},"counts_by_year":[],"updated_date":"2026-07-27T08:26:11.824852","created_date":"2025-10-10T00:00:00"}
