{"id":"https://openalex.org/W7129105350","doi":"https://doi.org/10.1093/bioinformatics/btag076","title":"IgPose: a generative data-augmented pipeline for robust immunoglobulin\u2013antigen binding prediction","display_name":"IgPose: a generative data-augmented pipeline for robust immunoglobulin\u2013antigen binding prediction","publication_year":2026,"publication_date":"2026-02-12","ids":{"openalex":"https://openalex.org/W7129105350","doi":"https://doi.org/10.1093/bioinformatics/btag076","pmid":"https://pubmed.ncbi.nlm.nih.gov/41692975"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btag076","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag076","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/42/3/btag076/66919650/btag076.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/42/3/btag076/66919650/btag076.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002688714","display_name":"Tien-Cuong Bui","orcid":"https://orcid.org/0000-0002-6697-2617"},"institutions":[{"id":"https://openalex.org/I4210097545","display_name":"Infrafrontier","ror":"https://ror.org/00vawn972","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I4210097545"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tien-Cuong Bui","raw_affiliation_strings":["Arontier Co., Ltd. R&D Department, , Seoul, 06735,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arontier Co., Ltd. R&D Department, , Seoul, 06735,","institution_ids":["https://openalex.org/I4210097545"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071213463","display_name":"Injae Chung","orcid":"https://orcid.org/0000-0002-2902-4677"},"institutions":[{"id":"https://openalex.org/I4210097545","display_name":"Infrafrontier","ror":"https://ror.org/00vawn972","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I4210097545"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Injae Chung","raw_affiliation_strings":["Arontier Co., Ltd. R&D Department, , Seoul, 06735,"],"raw_orcid":"https://orcid.org/0000-0002-2902-4677","affiliations":[{"raw_affiliation_string":"Arontier Co., Ltd. R&D Department, , Seoul, 06735,","institution_ids":["https://openalex.org/I4210097545"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5126076246","display_name":"Wonjun Lee","orcid":null},"institutions":[{"id":"https://openalex.org/I4210097545","display_name":"Infrafrontier","ror":"https://ror.org/00vawn972","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I4210097545"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Wonjun Lee","raw_affiliation_strings":["Arontier Co., Ltd. R&D Department, , Seoul, 06735,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arontier Co., Ltd. R&D Department, , Seoul, 06735,","institution_ids":["https://openalex.org/I4210097545"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5126163861","display_name":"Junsu Ko","orcid":null},"institutions":[{"id":"https://openalex.org/I4210097545","display_name":"Infrafrontier","ror":"https://ror.org/00vawn972","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I4210097545"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Junsu Ko","raw_affiliation_strings":["Arontier Co., Ltd. R&D Department, , Seoul, 06735,"],"raw_orcid":"https://orcid.org/0000-0001-7416-4591","affiliations":[{"raw_affiliation_string":"Arontier Co., Ltd. R&D Department, , Seoul, 06735,","institution_ids":["https://openalex.org/I4210097545"]}]},{"author_position":"last","author":{"id":null,"display_name":"Juyong Lee","orcid":"https://orcid.org/0000-0003-1174-4358"},"institutions":[{"id":"https://openalex.org/I118373667","display_name":"Seoul National University of Science and Technology","ror":"https://ror.org/00chfja07","country_code":"KR","type":"education","lineage":["https://openalex.org/I118373667"]},{"id":"https://openalex.org/I2802457231","display_name":"New Generation University College","ror":"https://ror.org/015aem925","country_code":"ET","type":"education","lineage":["https://openalex.org/I2802457231"]},{"id":"https://openalex.org/I4210097545","display_name":"Infrafrontier","ror":"https://ror.org/00vawn972","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I4210097545"]}],"countries":["DE","ET","KR"],"is_corresponding":true,"raw_author_name":"Juyong Lee","raw_affiliation_strings":["Arontier Co., Ltd. R&D Department, , Seoul, 06735,","Seoul National University Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, , Seoul, 08826,","Seoul National University Research Institute of Pharmaceutical Science, College of Pharmacy, , Seoul, 08826,"],"raw_orcid":"https://orcid.org/0000-0003-1174-4358","affiliations":[{"raw_affiliation_string":"Arontier Co., Ltd. R&D Department, , Seoul, 06735,","institution_ids":["https://openalex.org/I4210097545"]},{"raw_affiliation_string":"Seoul National University Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, , Seoul, 08826,","institution_ids":["https://openalex.org/I118373667"]},{"raw_affiliation_string":"Seoul National University Research Institute of Pharmaceutical Science, College of Pharmacy, , Seoul, 08826,","institution_ids":["https://openalex.org/I2802457231"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5126163861"],"corresponding_institution_ids":["https://openalex.org/I118373667","https://openalex.org/I2802457231","https://openalex.org/I4210097545"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.15661863,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"42","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.8241999745368958,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.8241999745368958,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.12839999794960022,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.004800000227987766,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7731999754905701},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.5218999981880188},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.37380000948905945},{"id":"https://openalex.org/keywords/generative-model","display_name":"Generative model","score":0.31630000472068787},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.31369999051094055}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7731999754905701},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7196000218391418},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.5218999981880188},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4885999858379364},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4595000147819519},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.37380000948905945},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.37229999899864197},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3637999892234802},{"id":"https://openalex.org/C167966045","wikidata":"https://www.wikidata.org/wiki/Q5532625","display_name":"Generative model","level":3,"score":0.31630000472068787},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.31369999051094055},{"id":"https://openalex.org/C3020402766","wikidata":"https://www.wikidata.org/wiki/Q104376712","display_name":"Prior information","level":2,"score":0.30489999055862427},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.26429998874664307},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.2529999911785126}],"mesh":[{"descriptor_ui":"D000095763","descriptor_name":"Immunoinformatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095763","descriptor_name":"Immunoinformatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btag076","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag076","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/42/3/btag076/66919650/btag076.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41692975","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41692975","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:2603.14870","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2603.14870","pdf_url":"https://arxiv.org/pdf/2603.14870","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12989135","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12989135/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btag076","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag076","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/42/3/btag076/66919650/btag076.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.5110884308815002,"display_name":"Reduced inequalities"},{"id":"https://metadata.un.org/sdg/16","score":0.4646356403827667,"display_name":"Peace, Justice and strong institutions"}],"awards":[{"id":"https://openalex.org/G1605381098","display_name":null,"funder_award_id":"RS-2024-00352229","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G1731579593","display_name":null,"funder_award_id":"2022M3A9J4079198","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G2398036105","display_name":null,"funder_award_id":"370C-20220109","funder_id":"https://openalex.org/F4320321292","funder_display_name":"Seoul National University"},{"id":"https://openalex.org/G3164450440","display_name":null,"funder_award_id":"0413-20230053","funder_id":"https://openalex.org/F4320321292","funder_display_name":"Seoul National University"},{"id":"https://openalex.org/G3482102824","display_name":null,"funder_award_id":"2022M3E5F3081268","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G35272312","display_name":null,"funder_award_id":"NRF-2022M3E5F3081268","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G3794639614","display_name":null,"funder_award_id":"2022R1C1C1005080","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G6380830294","display_name":null,"funder_award_id":"NRF-2022M3E5F3081268","funder_id":"https://openalex.org/F4320320671","funder_display_name":"National Research Foundation"},{"id":"https://openalex.org/G8441597283","display_name":null,"funder_award_id":"RS-2023-","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G8959955562","display_name":null,"funder_award_id":"2020M3A9G7103933","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320321292","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320328359","display_name":"Ministry of Science and ICT, South Korea","ror":"https://ror.org/01wpjm123"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7129105350.pdf","grobid_xml":"https://content.openalex.org/works/W7129105350.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1030883578","https://openalex.org/W1855237549","https://openalex.org/W1982679430","https://openalex.org/W2092285329","https://openalex.org/W2105668062","https://openalex.org/W2110505462","https://openalex.org/W2124981562","https://openalex.org/W2143467722","https://openalex.org/W2508425869","https://openalex.org/W2512372054","https://openalex.org/W2606439133","https://openalex.org/W2766169371","https://openalex.org/W2766842037","https://openalex.org/W2915344963","https://openalex.org/W2950954328","https://openalex.org/W2953008890","https://openalex.org/W2964965456","https://openalex.org/W2968734407","https://openalex.org/W2980681402","https://openalex.org/W3158023254","https://openalex.org/W3164107346","https://openalex.org/W3202105508","https://openalex.org/W4212886242","https://openalex.org/W4229892776","https://openalex.org/W4246234153","https://openalex.org/W4249802798","https://openalex.org/W4293475204","https://openalex.org/W4307229299","https://openalex.org/W4327550249","https://openalex.org/W4367032011","https://openalex.org/W4383099422","https://openalex.org/W4390619601","https://openalex.org/W4403324307","https://openalex.org/W4404458588","https://openalex.org/W4404505690","https://openalex.org/W4404565424","https://openalex.org/W4411258922","https://openalex.org/W4411463597","https://openalex.org/W4413037210"],"related_works":[],"abstract_inverted_index":{"MOTIVATION:":[0],"Predicting":[1],"immunoglobulin-antigen":[2],"(Ig-Ag)":[3],"binding":[4,106],"remains":[5],"a":[6,31,42,58,137],"significant":[7],"challenge":[8],"due":[9],"to":[10,77,94,128],"the":[11,18,52,124],"paucity":[12],"of":[13,21,61],"experimentally":[14],"resolved":[15],"complexes":[16],"and":[17,38,73,82,109,123,130,151],"limited":[19],"accuracy":[20],"de":[22],"novo":[23],"Ig":[24],"structure":[25],"prediction.":[26],"RESULTS:":[27],"We":[28,85],"introduce":[29],"IgPose,":[30],"generalizable":[32],"framework":[33,101],"for":[34,105,111,141],"Ig-Ag":[35],"pose":[36,107,149],"identification":[37],"scoring,":[39],"built":[40],"on":[41,118,159],"generative":[43],"data-augmentation":[44],"pipeline.":[45],"To":[46],"mitigate":[47],"data":[48],"scarcity,":[49],"we":[50],"constructed":[51],"Structural":[53],"Immunoglobulin":[54],"Decoy":[55],"Database":[56],"(SIDD),":[57],"comprehensive":[59],"repository":[60],"high-fidelity":[62],"synthetic":[63],"decoys.":[64],"IgPose":[65,134,156],"integrates":[66],"equivariant":[67],"graph":[68],"neural":[69],"networks,":[70],"ESM-2":[71],"embeddings,":[72],"gated":[74],"recurrent":[75],"units":[76],"synergistically":[78],"capture":[79],"both":[80],"geometric":[81],"evolutionary":[83],"features.":[84],"implemented":[86],"interface-focused":[87],"k-hop":[88],"sampling":[89],"with":[90],"biologically":[91],"guided":[92],"pooling":[93],"enhance":[95],"generalization":[96],"across":[97],"diverse":[98],"interfaces.":[99],"The":[100],"comprises":[102],"two":[103],"sub-networks-IgPoseClassifier":[104],"discrimination":[108],"IgPoseScore":[110],"DockQ":[112],"score":[113],"estimation-and":[114],"achieves":[115],"robust":[116],"performance":[117],"curated":[119],"internal":[120],"test":[121],"sets":[122],"CASP-16":[125],"benchmark":[126],"compared":[127],"physics":[129],"deep":[131],"learning":[132],"baselines.":[133],"serves":[135],"as":[136],"versatile":[138],"computational":[139],"tool":[140],"high-throughput":[142],"antibody":[143],"discovery":[144],"pipelines":[145],"by":[146],"providing":[147],"accurate":[148],"filtering":[150],"ranking.":[152],"AVAILABILITY":[153],"AND":[154],"IMPLEMENTATION:":[155],"is":[157],"available":[158],"GitHub":[160],"(https://github.com/arontier/igpose).":[161]},"counts_by_year":[],"updated_date":"2026-07-09T07:52:08.696243","created_date":"2026-02-17T00:00:00"}
