{"id":"https://openalex.org/W7131207817","doi":"https://doi.org/10.1093/bioinformatics/btag061","title":"Knowledge-based citation reasoning for biomedical domain","display_name":"Knowledge-based citation reasoning for biomedical domain","publication_year":2026,"publication_date":"2026-02-24","ids":{"openalex":"https://openalex.org/W7131207817","doi":"https://doi.org/10.1093/bioinformatics/btag061","pmid":"https://pubmed.ncbi.nlm.nih.gov/41734273"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btag061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag061","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btag061","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038321820","display_name":"Pengcheng Li","orcid":"https://orcid.org/0000-0002-5819-8924"},"institutions":[{"id":"https://openalex.org/I4210099437","display_name":"Hubei University Of Economics","ror":"https://ror.org/012a84b59","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210099437"]},{"id":"https://openalex.org/I74525822","display_name":"Hubei University of Technology","ror":"https://ror.org/02d3fj342","country_code":"CN","type":"education","lineage":["https://openalex.org/I74525822"]},{"id":"https://openalex.org/I75900474","display_name":"Hubei University","ror":"https://ror.org/03a60m280","country_code":"CN","type":"education","lineage":["https://openalex.org/I75900474"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Pengcheng Li","raw_affiliation_strings":["Hubei Digital Industrial Economic Development Research Center, Hubei University of Technology , Wuhan 430068, Hubei,","School of Economics and Management, Hubei University of Technology , Wuhan 430068, Hubei,"],"affiliations":[{"raw_affiliation_string":"Hubei Digital Industrial Economic Development Research Center, Hubei University of Technology , Wuhan 430068, Hubei,","institution_ids":["https://openalex.org/I74525822","https://openalex.org/I4210099437"]},{"raw_affiliation_string":"School of Economics and Management, Hubei University of Technology , Wuhan 430068, Hubei,","institution_ids":["https://openalex.org/I75900474","https://openalex.org/I74525822"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071329804","display_name":"Kai Zhang","orcid":"https://orcid.org/0000-0002-5786-6708"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kai Zhang","raw_affiliation_strings":["Computer Science and Data Science, Worcester Polytechnic Institute , Worcester, MA 01609,"],"affiliations":[{"raw_affiliation_string":"Computer Science and Data Science, Worcester Polytechnic Institute , Worcester, MA 01609,","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101985030","display_name":"Xiaozhong Liu","orcid":"https://orcid.org/0000-0003-3477-8323"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaozhong Liu","raw_affiliation_strings":["Computer Science and Data Science, Worcester Polytechnic Institute , Worcester, MA 01609,"],"affiliations":[{"raw_affiliation_string":"Computer Science and Data Science, Worcester Polytechnic Institute , Worcester, MA 01609,","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101722404","display_name":"Xuhong Zhang","orcid":"https://orcid.org/0000-0001-7563-9915"},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xuhong Zhang","raw_affiliation_strings":["Department of Computer Science, Luddy School of Informatics, Computing, and Engineering, Indiana University , Bloomington, IN 47408,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Luddy School of Informatics, Computing, and Engineering, Indiana University , Bloomington, IN 47408,","institution_ids":["https://openalex.org/I4210119109"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5038321820"],"corresponding_institution_ids":["https://openalex.org/I4210099437","https://openalex.org/I74525822","https://openalex.org/I75900474"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.6314732,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"42","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5537999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5537999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.23659999668598175,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.029100000858306885,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.6751999855041504},{"id":"https://openalex.org/keywords/citation","display_name":"Citation","score":0.5263000130653381},{"id":"https://openalex.org/keywords/automated-reasoning","display_name":"Automated reasoning","score":0.3398999869823456},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.3203999996185303},{"id":"https://openalex.org/keywords/domain-model","display_name":"Domain model","score":0.2904999852180481}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7537999749183655},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.6751999855041504},{"id":"https://openalex.org/C2778805511","wikidata":"https://www.wikidata.org/wiki/Q1713","display_name":"Citation","level":2,"score":0.5263000130653381},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4293000102043152},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3402999937534332},{"id":"https://openalex.org/C195344581","wikidata":"https://www.wikidata.org/wiki/Q2555318","display_name":"Automated reasoning","level":2,"score":0.3398999869823456},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3352999985218048},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32179999351501465},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.3203999996185303},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.31439998745918274},{"id":"https://openalex.org/C92548554","wikidata":"https://www.wikidata.org/wiki/Q2262868","display_name":"Domain model","level":3,"score":0.2904999852180481},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.2838999927043915},{"id":"https://openalex.org/C180198813","wikidata":"https://www.wikidata.org/wiki/Q121182","display_name":"Information system","level":2,"score":0.26820001006126404},{"id":"https://openalex.org/C58328972","wikidata":"https://www.wikidata.org/wiki/Q184609","display_name":"Expert system","level":2,"score":0.2590999901294708}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btag061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag061","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41734273","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41734273","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12987763","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12987763/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btag061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btag061","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.7243334054946899}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1895317372","https://openalex.org/W2044200559","https://openalex.org/W2070315769","https://openalex.org/W2103017472","https://openalex.org/W2154139219","https://openalex.org/W2159583324","https://openalex.org/W2223821166","https://openalex.org/W2558715006","https://openalex.org/W2798435682","https://openalex.org/W2911489562","https://openalex.org/W2921547842","https://openalex.org/W2944400536","https://openalex.org/W2952981920","https://openalex.org/W3010285420","https://openalex.org/W3033896008","https://openalex.org/W3089596210","https://openalex.org/W3092616398","https://openalex.org/W3093194543","https://openalex.org/W3159780875","https://openalex.org/W3160856016","https://openalex.org/W3196659853","https://openalex.org/W3202242582","https://openalex.org/W3204279168","https://openalex.org/W4318046671","https://openalex.org/W4385227045"],"related_works":[],"abstract_inverted_index":{"Code":[0],"and":[1,10],"data":[2],"are":[3],"available":[4],"at":[5],"Zenodo":[6],"(archival":[7],"DOI:":[8],"10.281/zenodo.14893445)":[9],"GitHub:":[11],"https://github.com/zhongxiangboy/Knowledge-based-Citation-Reasoning-for-Biomedical-Domain.":[12]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2026-02-25T00:00:00"}
