{"id":"https://openalex.org/W4417098881","doi":"https://doi.org/10.1093/bioinformatics/btaf654","title":"Molecular-level protein semantic learning via structure-aware coarse-grained language modeling","display_name":"Molecular-level protein semantic learning via structure-aware coarse-grained language modeling","publication_year":2025,"publication_date":"2025-12-02","ids":{"openalex":"https://openalex.org/W4417098881","doi":"https://doi.org/10.1093/bioinformatics/btaf654","pmid":"https://pubmed.ncbi.nlm.nih.gov/41352986"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf654","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf654","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf654/65790122/btaf654.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf654/65790122/btaf654.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Jun Zhang","orcid":"https://orcid.org/0000-0003-0484-0966"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jun Zhang","raw_affiliation_strings":["National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","School of Artificial Intelligence, Shenzhen University, Shenzhen, Guangdong 518060, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I4210152380"]},{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen University, Shenzhen, Guangdong 518060, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074411080","display_name":"Xiaoru Weng","orcid":null},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xueer Weng","raw_affiliation_strings":["National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I4210152380"]},{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054834048","display_name":"Tiantian Zhu","orcid":"https://orcid.org/0000-0002-5470-8309"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tiantian Zhu","raw_affiliation_strings":["National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I4210152380"]},{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024831550","display_name":"Yumeng Liu","orcid":"https://orcid.org/0009-0009-0888-6575"},"institutions":[{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yumeng Liu","raw_affiliation_strings":["School of Artificial Intelligence, Shenzhen Technology University , Shenzhen, Guangdong 518118,","School of Artificial Intelligence, Shenzhen Technology University, Shenzhen, Guangdong 518118, China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen Technology University , Shenzhen, Guangdong 518118,","institution_ids":["https://openalex.org/I4210152380"]},{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen Technology University, Shenzhen, Guangdong 518118, China","institution_ids":["https://openalex.org/I4210152380"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052762681","display_name":"Zexuan Zhu","orcid":"https://orcid.org/0000-0001-8479-6904"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zexuan Zhu","raw_affiliation_strings":["National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China"],"affiliations":[{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I4210152380"]},{"raw_affiliation_string":"School of Artificial Intelligence, Shenzhen University , Shenzhen, Guangdong 518060,","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China","institution_ids":["https://openalex.org/I180726961"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I180726961","https://openalex.org/I4210152380"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.33834693,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"42","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.23479999601840973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.23479999601840973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.1120000034570694,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.057999998331069946,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.6542999744415283},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.48750001192092896},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.42170000076293945},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.4043000042438507},{"id":"https://openalex.org/keywords/semantic-data-model","display_name":"Semantic data model","score":0.36250001192092896},{"id":"https://openalex.org/keywords/modeling-language","display_name":"Modeling language","score":0.34220001101493835},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.3393000066280365},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.31700000166893005}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8748999834060669},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.7138000130653381},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.6542999744415283},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6087999939918518},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.48750001192092896},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.42170000076293945},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.4043000042438507},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4020000100135803},{"id":"https://openalex.org/C90312973","wikidata":"https://www.wikidata.org/wiki/Q7449052","display_name":"Semantic data model","level":2,"score":0.36250001192092896},{"id":"https://openalex.org/C179603123","wikidata":"https://www.wikidata.org/wiki/Q1941921","display_name":"Modeling language","level":3,"score":0.34220001101493835},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.3393000066280365},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.31700000166893005},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.29440000653266907},{"id":"https://openalex.org/C67277372","wikidata":"https://www.wikidata.org/wiki/Q7449085","display_name":"Semantic role labeling","level":3,"score":0.28049999475479126},{"id":"https://openalex.org/C2985998994","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Source model","level":2,"score":0.2777000069618225},{"id":"https://openalex.org/C2983685735","wikidata":"https://www.wikidata.org/wiki/Q5227355","display_name":"Data source","level":2,"score":0.2754000127315521},{"id":"https://openalex.org/C83479923","wikidata":"https://www.wikidata.org/wiki/Q2063748","display_name":"Universal Networking Language","level":4,"score":0.26739999651908875},{"id":"https://openalex.org/C511149849","wikidata":"https://www.wikidata.org/wiki/Q7449051","display_name":"Semantic computing","level":3,"score":0.26739999651908875},{"id":"https://openalex.org/C2983448237","wikidata":"https://www.wikidata.org/wiki/Q1078276","display_name":"Language understanding","level":2,"score":0.26579999923706055},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.25870001316070557},{"id":"https://openalex.org/C195324797","wikidata":"https://www.wikidata.org/wiki/Q33742","display_name":"Natural language","level":2,"score":0.25119999051094055}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf654","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf654","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf654/65790122/btaf654.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41352986","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41352986","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12758601","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12758601/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf654","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf654","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf654/65790122/btaf654.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2756446455","display_name":null,"funder_award_id":"62302311","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3085993365","display_name":null,"funder_award_id":"(Grant No.","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G37568934","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5299632139","display_name":null,"funder_award_id":"62406199","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6276227692","display_name":null,"funder_award_id":"62471310","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7726157001","display_name":null,"funder_award_id":"Grant No.","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G857785255","display_name":null,"funder_award_id":"62302316","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4417098881.pdf","grobid_xml":"https://content.openalex.org/works/W4417098881.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1971650367","https://openalex.org/W2008708467","https://openalex.org/W2051210555","https://openalex.org/W2102461176","https://openalex.org/W2103017472","https://openalex.org/W2130479394","https://openalex.org/W2138122982","https://openalex.org/W2158714788","https://openalex.org/W2170747616","https://openalex.org/W2224056471","https://openalex.org/W2242818861","https://openalex.org/W2558217333","https://openalex.org/W2767044445","https://openalex.org/W2999044305","https://openalex.org/W3089425003","https://openalex.org/W3146944767","https://openalex.org/W3164046276","https://openalex.org/W3177500196","https://openalex.org/W3177828909","https://openalex.org/W4205773061","https://openalex.org/W4206662285","https://openalex.org/W4250297812","https://openalex.org/W4309506674","https://openalex.org/W4327550249","https://openalex.org/W4375858802","https://openalex.org/W4388231013","https://openalex.org/W4396721167","https://openalex.org/W4401254303","https://openalex.org/W4404447386"],"related_works":[],"abstract_inverted_index":{"The":[0],"data":[1],"and":[2,14],"source":[3],"code":[4],"of":[5],"the":[6],"proposed":[7],"method":[8],"are":[9],"available":[10],"at":[11],"GitHub":[12],"(https://github.com/bug-0x3f/coarse-grained-protein-language)":[13],"Zenodo":[15],"(DOI:":[16],"10.5281/zenodo.17674298).":[17]},"counts_by_year":[],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-12-08T00:00:00"}
