{"id":"https://openalex.org/W4417033052","doi":"https://doi.org/10.1093/bioinformatics/btaf606","title":"<i>COCOMAPS</i> 2.0: a web server for identifying, analyzing, and visualizing atomic interactions at the interface of biomolecular complexes","display_name":"<i>COCOMAPS</i> 2.0: a web server for identifying, analyzing, and visualizing atomic interactions at the interface of biomolecular complexes","publication_year":2025,"publication_date":"2025-12-01","ids":{"openalex":"https://openalex.org/W4417033052","doi":"https://doi.org/10.1093/bioinformatics/btaf606","pmid":"https://pubmed.ncbi.nlm.nih.gov/41335450"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf606","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf606","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btaf606","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054303859","display_name":"Mohit Chawla","orcid":"https://orcid.org/0000-0002-3332-3055"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":true,"raw_author_name":"Mohit Chawla","raw_affiliation_strings":["Physical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900,","King Abdullah University of Science and Technology (KAUST) Physical Sciences and Engineering Division, , Thuwal, 23955-6900,"],"affiliations":[{"raw_affiliation_string":"Physical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900,","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"King Abdullah University of Science and Technology (KAUST) Physical Sciences and Engineering Division, , Thuwal, 23955-6900,","institution_ids":["https://openalex.org/I71920554"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045748683","display_name":"Utkarsh Kalra","orcid":null},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Utkarsh Kalra","raw_affiliation_strings":["Physical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900,","King Abdullah University of Science and Technology (KAUST) Physical Sciences and Engineering Division, , Thuwal, 23955-6900,"],"affiliations":[{"raw_affiliation_string":"Physical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900,","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"King Abdullah University of Science and Technology (KAUST) Physical Sciences and Engineering Division, , Thuwal, 23955-6900,","institution_ids":["https://openalex.org/I71920554"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110704686","display_name":"Andrea Petta","orcid":null},"institutions":[{"id":"https://openalex.org/I146552867","display_name":"University of Puget Sound","ror":"https://ror.org/042drmv40","country_code":"US","type":"education","lineage":["https://openalex.org/I146552867"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrea Petta","raw_affiliation_strings":["Tagetik Software S.R.L , Lucca 55100,","Tagetik Software S.R.L , Lucca, 55100,"],"affiliations":[{"raw_affiliation_string":"Tagetik Software S.R.L , Lucca 55100,","institution_ids":["https://openalex.org/I146552867"]},{"raw_affiliation_string":"Tagetik Software S.R.L , Lucca, 55100,","institution_ids":["https://openalex.org/I146552867"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065484365","display_name":"Suraj Sharma","orcid":"https://orcid.org/0000-0002-4033-1838"},"institutions":[{"id":"https://openalex.org/I4210122587","display_name":"Asian Institute of Medical Sciences","ror":"https://ror.org/02yghr808","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I4210122587"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Suraj Sharma","raw_affiliation_strings":["Department of Research and Innovation, STEMskills Research and Education Lab Private Limited , Faridabad 121002, Haryana,","STEMskills Research and Education Lab Private Limited Department of Research and Innovation, , Faridabad, Haryana 121002,"],"affiliations":[{"raw_affiliation_string":"Department of Research and Innovation, STEMskills Research and Education Lab Private Limited , Faridabad 121002, Haryana,","institution_ids":["https://openalex.org/I4210122587"]},{"raw_affiliation_string":"STEMskills Research and Education Lab Private Limited Department of Research and Innovation, , Faridabad, Haryana 121002,","institution_ids":["https://openalex.org/I4210122587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067789667","display_name":"Abdul Rajjak Shaikh","orcid":"https://orcid.org/0000-0003-4444-0684"},"institutions":[{"id":"https://openalex.org/I183638586","display_name":"Parthenope University of Naples","ror":"https://ror.org/05pcv4v03","country_code":"IT","type":"education","lineage":["https://openalex.org/I183638586"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Abdul Rajjak Shaikh","raw_affiliation_strings":["Department of Sciences and Technologies, University \u201cParthenope\u201d of Naples , Naples 80143,","University \u201cParthenope\u201d of Naples Department of Sciences and Technologies, , Naples, C4 80143,"],"affiliations":[{"raw_affiliation_string":"Department of Sciences and Technologies, University \u201cParthenope\u201d of Naples , Naples 80143,","institution_ids":["https://openalex.org/I183638586"]},{"raw_affiliation_string":"University \u201cParthenope\u201d of Naples Department of Sciences and Technologies, , Naples, C4 80143,","institution_ids":["https://openalex.org/I183638586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053222658","display_name":"Luigi Cavallo","orcid":"https://orcid.org/0000-0002-1398-338X"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Luigi Cavallo","raw_affiliation_strings":["Physical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900,","King Abdullah University of Science and Technology (KAUST) Physical Sciences and Engineering Division, , Thuwal, 23955-6900,"],"affiliations":[{"raw_affiliation_string":"Physical Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900,","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"King Abdullah University of Science and Technology (KAUST) Physical Sciences and Engineering Division, , Thuwal, 23955-6900,","institution_ids":["https://openalex.org/I71920554"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071471999","display_name":"Romina Oliva","orcid":"https://orcid.org/0000-0002-6156-6249"},"institutions":[{"id":"https://openalex.org/I183638586","display_name":"Parthenope University of Naples","ror":"https://ror.org/05pcv4v03","country_code":"IT","type":"education","lineage":["https://openalex.org/I183638586"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Romina Oliva","raw_affiliation_strings":["Department of Sciences and Technologies, University \u201cParthenope\u201d of Naples , Naples 80143,","University \u201cParthenope\u201d of Naples Department of Sciences and Technologies, , Naples, C4 80143,"],"affiliations":[{"raw_affiliation_string":"Department of Sciences and Technologies, University \u201cParthenope\u201d of Naples , Naples 80143,","institution_ids":["https://openalex.org/I183638586"]},{"raw_affiliation_string":"University \u201cParthenope\u201d of Naples Department of Sciences and Technologies, , Naples, C4 80143,","institution_ids":["https://openalex.org/I183638586"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5054303859"],"corresponding_institution_ids":["https://openalex.org/I71920554"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":6.0334,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.9663304,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":"41","issue":"12","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.6098999977111816,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.6098999977111816,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.06790000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.06019999831914902,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.6995000243186951},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5455999970436096},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.527999997138977},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5145000219345093},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5073999762535095},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4787999987602234},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4763999879360199},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4487999975681305}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7324000000953674},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.6995000243186951},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5455999970436096},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.527999997138977},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5145000219345093},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5073999762535095},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4787999987602234},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4763999879360199},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4487999975681305},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.4041000008583069},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.38440001010894775},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3578999936580658},{"id":"https://openalex.org/C2984519610","wikidata":"https://www.wikidata.org/wiki/Q35127","display_name":"Web site","level":3,"score":0.35760000348091125},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.35670000314712524},{"id":"https://openalex.org/C2983909278","wikidata":"https://www.wikidata.org/wiki/Q6368","display_name":"Web browser","level":3,"score":0.3393999934196472},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.3337000012397766},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.2976999878883362},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.2973000109195709},{"id":"https://openalex.org/C2984968299","wikidata":"https://www.wikidata.org/wiki/Q1077784","display_name":"Software tool","level":3,"score":0.2888999879360199},{"id":"https://openalex.org/C164554305","wikidata":"https://www.wikidata.org/wiki/Q71550","display_name":"Application server","level":2,"score":0.2770000100135803},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.25870001316070557},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.2581000030040741},{"id":"https://openalex.org/C2988963302","wikidata":"https://www.wikidata.org/wiki/Q629206","display_name":"Program code","level":2,"score":0.25440001487731934},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.2508000135421753}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009696","descriptor_name":"Nucleic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D009696","descriptor_name":"Nucleic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D009696","descriptor_name":"Nucleic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D009696","descriptor_name":"Nucleic Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btaf606","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf606","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41335450","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41335450","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12684709","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12684709/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:ricerca.uniparthenope.it:11367/154439","is_oa":false,"landing_page_url":"https://hdl.handle.net/11367/154439","pdf_url":null,"source":{"id":"https://openalex.org/S4377196432","display_name":"CINECA IRIS Institutial research information system (Parthenope University of Naples)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183638586","host_organization_name":"Parthenope University of Naples","host_organization_lineage":["https://openalex.org/I183638586"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf606","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf606","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1486913820","https://openalex.org/W1843273176","https://openalex.org/W1978583577","https://openalex.org/W1985724808","https://openalex.org/W2005772096","https://openalex.org/W2051628563","https://openalex.org/W2062708380","https://openalex.org/W2115339329","https://openalex.org/W2119097398","https://openalex.org/W2121069903","https://openalex.org/W2129562311","https://openalex.org/W2130479394","https://openalex.org/W2343238565","https://openalex.org/W2554109484","https://openalex.org/W2560264526","https://openalex.org/W2753306418","https://openalex.org/W2762567707","https://openalex.org/W2767509030","https://openalex.org/W2783006100","https://openalex.org/W2980678340","https://openalex.org/W3022607996","https://openalex.org/W3087201089","https://openalex.org/W3128572085","https://openalex.org/W3159719254","https://openalex.org/W4200456566","https://openalex.org/W4220906997","https://openalex.org/W4226105311","https://openalex.org/W4281760545","https://openalex.org/W4309765499","https://openalex.org/W4366270699","https://openalex.org/W4388034457","https://openalex.org/W4388901536","https://openalex.org/W4396519784","https://openalex.org/W4396721167","https://openalex.org/W4403209372","https://openalex.org/W4404789375","https://openalex.org/W4405272833","https://openalex.org/W4409153003","https://openalex.org/W4410251219"],"related_works":[],"abstract_inverted_index":{"COCOMAPS":[0],"2.0":[1],"is":[2],"accessible":[3],"as":[4,12],"a":[5,13],"public":[6],"web":[7],"tool":[8],"at":[9,16],"https://aocdweb.com/BioTools/cocomaps2":[10],"and":[11],"standalone":[14],"code":[15],"https://doi.org/10.5281/zenodo.17390665.":[17]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-12-04T00:00:00"}
