{"id":"https://openalex.org/W4411193351","doi":"https://doi.org/10.1093/bioinformatics/btaf341","title":"FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in <i>Mycobacterium tuberculosis</i>","display_name":"FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in <i>Mycobacterium tuberculosis</i>","publication_year":2025,"publication_date":"2025-06-11","ids":{"openalex":"https://openalex.org/W4411193351","doi":"https://doi.org/10.1093/bioinformatics/btaf341","pmid":"https://pubmed.ncbi.nlm.nih.gov/40498551"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf341","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf341","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf341/63471639/btaf341.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf341/63471639/btaf341.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5112999779","display_name":"R. A.","orcid":"https://orcid.org/0000-0003-1706-8119"},"institutions":[{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Axel A Ramos-Garc\u00eda","raw_affiliation_strings":["Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","Tecnol\u00f3gico de Monterrey Escuela de Ingenier\u00eda y Ciencias, , Av. Eugenio Garza Sada, 64700, N.L., M\u00e9xico"],"affiliations":[{"raw_affiliation_string":"Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]},{"raw_affiliation_string":"Tecnol\u00f3gico de Monterrey Escuela de Ingenier\u00eda y Ciencias, , Av. Eugenio Garza Sada, 64700, N.L., M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5118120144","display_name":"Paulina M Mej\u00eda-Ponce","orcid":null},"institutions":[{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Paulina M Mej\u00eda-Ponce","raw_affiliation_strings":["Centro de Biotecnolog\u00eda FEMSA, Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico"],"affiliations":[{"raw_affiliation_string":"Centro de Biotecnolog\u00eda FEMSA, Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5118120145","display_name":"Nelly S\u00e9lem\u2010M\u00f3jica","orcid":"https://orcid.org/0000-0003-1697-3862"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Nelly S\u00e9lem-Mojica","raw_affiliation_strings":["Centro de Ciencias Matem\u00e1ticas, Universidad Nacional Aut\u00f3noma de M\u00e9xico, Residencial San Jos\u00e9 de la Huerta, Morelia, Michoac\u00e1n, 58089, M\u00e9xico","UNAM, Residencial San Jos\u00e9 de la Huerta Centro de Ciencias Matem\u00e1ticas, , 58089, Mich, M\u00e9xico"],"affiliations":[{"raw_affiliation_string":"Centro de Ciencias Matem\u00e1ticas, Universidad Nacional Aut\u00f3noma de M\u00e9xico, Residencial San Jos\u00e9 de la Huerta, Morelia, Michoac\u00e1n, 58089, M\u00e9xico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"UNAM, Residencial San Jos\u00e9 de la Huerta Centro de Ciencias Matem\u00e1ticas, , 58089, Mich, M\u00e9xico","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5118120146","display_name":"Santos-D\u00edaz Alejandro","orcid":"https://orcid.org/0000-0001-5235-7325"},"institutions":[{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Alejandro Santos-D\u00edaz","raw_affiliation_strings":["Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","Tecnol\u00f3gico de Monterrey Escuela de Ingenier\u00eda y Ciencias, , Av. Eugenio Garza Sada, 64700, N.L., M\u00e9xico"],"affiliations":[{"raw_affiliation_string":"Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]},{"raw_affiliation_string":"Tecnol\u00f3gico de Monterrey Escuela de Ingenier\u00eda y Ciencias, , Av. Eugenio Garza Sada, 64700, N.L., M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109166564","display_name":"Mr. Bravin D. Emmanuel Mr. Bravin D. Emmanuel","orcid":null},"institutions":[{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Emmanuel Mart\u00ednez-Ledesma","raw_affiliation_strings":["Escuela de Medicina y Ciencias de la Salud, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","Unidad de Biolog\u00eda Integrativa, The Institute for Obesity Research, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico"],"affiliations":[{"raw_affiliation_string":"Escuela de Medicina y Ciencias de la Salud, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]},{"raw_affiliation_string":"Unidad de Biolog\u00eda Integrativa, The Institute for Obesity Research, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5097320023","display_name":"Licona-Cassani Cuauhtemoc","orcid":"https://orcid.org/0000-0002-0360-3945"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]},{"id":"https://openalex.org/I884181516","display_name":"Universidad Aut\u00f3noma del Estado de Morelos","ror":"https://ror.org/03rzb4f20","country_code":"MX","type":"education","lineage":["https://openalex.org/I884181516"]},{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Cuauht\u00e9moc Licona-Cassani","raw_affiliation_strings":["Centro de Biotecnolog\u00eda FEMSA, Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","Instituto de Biotecnolog\u00eda, Universidad Nacional Aut\u00f3noma de M\u00e9xico, Cuernavaca, Morelos, 62210,","Unidad de Biolog\u00eda Integrativa, The Institute for Obesity Research, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico"],"affiliations":[{"raw_affiliation_string":"Centro de Biotecnolog\u00eda FEMSA, Escuela de Ingenier\u00eda y Ciencias, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]},{"raw_affiliation_string":"Instituto de Biotecnolog\u00eda, Universidad Nacional Aut\u00f3noma de M\u00e9xico, Cuernavaca, Morelos, 62210,","institution_ids":["https://openalex.org/I8961855","https://openalex.org/I884181516"]},{"raw_affiliation_string":"Unidad de Biolog\u00eda Integrativa, The Institute for Obesity Research, Tecnol\u00f3gico de Monterrey, Monterrey, Nuevo Le\u00f3n, 64700, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5112999779"],"corresponding_institution_ids":["https://openalex.org/I98461037"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.17177548,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"41","issue":"7","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.940500020980835,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.6927183270454407},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5885321497917175},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5621776580810547},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5547986030578613},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.5419602394104004},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4932953715324402},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4313867390155792},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2692355215549469},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17081832885742188},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12582725286483765},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10209938883781433}],"concepts":[{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.6927183270454407},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5885321497917175},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5621776580810547},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5547986030578613},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.5419602394104004},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4932953715324402},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4313867390155792},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2692355215549469},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17081832885742188},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12582725286483765},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10209938883781433},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf341","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf341","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf341/63471639/btaf341.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40498551","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40498551","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:11060845","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12255883","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf341","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf341","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf341/63471639/btaf341.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323037","display_name":"Instituto Tecnol\u00f3gico y de Estudios Superiores de Monterrey","ror":"https://ror.org/03ayjn504"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4411193351.pdf","grobid_xml":"https://content.openalex.org/works/W4411193351.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1619289482","https://openalex.org/W2080314445","https://openalex.org/W2155098652","https://openalex.org/W2520492213","https://openalex.org/W2901029329","https://openalex.org/W2970534831","https://openalex.org/W3031514813","https://openalex.org/W3093733771","https://openalex.org/W3183825328","https://openalex.org/W3210823154","https://openalex.org/W4206628973","https://openalex.org/W4223934800","https://openalex.org/W4297215774","https://openalex.org/W4303022261","https://openalex.org/W4364375398","https://openalex.org/W4385880616","https://openalex.org/W7014343384"],"related_works":["https://openalex.org/W2972094210","https://openalex.org/W4308058527","https://openalex.org/W2110949356","https://openalex.org/W4210506554","https://openalex.org/W1538374398","https://openalex.org/W2050407936","https://openalex.org/W2042252940","https://openalex.org/W2411061500","https://openalex.org/W3160640465","https://openalex.org/W2394233015"],"abstract_inverted_index":{"FuNTB":[0],"is":[1,7],"implemented":[2],"in":[3],"Python":[4],"3.8+":[5],"and":[6],"freely":[8],"available":[9],"under":[10],"the":[11],"MIT":[12],"license":[13],"at":[14],"https://doi.org/10.5281/zenodo.15399917.":[15]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-06-11T00:00:00"}
