{"id":"https://openalex.org/W4411078008","doi":"https://doi.org/10.1093/bioinformatics/btaf313","title":"IGCN: integrative graph convolution networks for patient level insights and biomarker discovery in multi-omics integration","display_name":"IGCN: integrative graph convolution networks for patient level insights and biomarker discovery in multi-omics integration","publication_year":2025,"publication_date":"2025-06-01","ids":{"openalex":"https://openalex.org/W4411078008","doi":"https://doi.org/10.1093/bioinformatics/btaf313","pmid":"https://pubmed.ncbi.nlm.nih.gov/40468582"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf313","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf313","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btaf313","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5093845484","display_name":"Cagri Ozdemir","orcid":null},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I4210154513","display_name":"Sunny BioDiscovery (United States)","ror":"https://ror.org/04x5cyt12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210154513"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cagri Ozdemir","raw_affiliation_strings":["BioDiscovery Institute, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas, Denton, TX 76203, United States"],"affiliations":[{"raw_affiliation_string":"BioDiscovery Institute, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas, Denton, TX 76203, United States","institution_ids":["https://openalex.org/I123534392"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039762113","display_name":"Yashu Vashishath","orcid":null},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I4210154513","display_name":"Sunny BioDiscovery (United States)","ror":"https://ror.org/04x5cyt12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210154513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yashu Vashishath","raw_affiliation_strings":["BioDiscovery Institute, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas, Denton, TX 76203, United States"],"affiliations":[{"raw_affiliation_string":"BioDiscovery Institute, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas, Denton, TX 76203, United States","institution_ids":["https://openalex.org/I123534392"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072283349","display_name":"Serdar Bozdag","orcid":"https://orcid.org/0000-0002-4813-4310"},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I4210154513","display_name":"Sunny BioDiscovery (United States)","ror":"https://ror.org/04x5cyt12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210154513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Serdar Bozdag","raw_affiliation_strings":["BioDiscovery Institute, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","Department of Mathematics, University of North Texas , Denton, TX 76203,","Department of Mathematics, University of North Texas, Denton, TX 76203, United States"],"affiliations":[{"raw_affiliation_string":"BioDiscovery Institute, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Mathematics, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Mathematics, University of North Texas, Denton, TX 76203, United States","institution_ids":["https://openalex.org/I123534392"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Alzheimer\u2019s Disease Neuroimaging Initiative","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alzheimer\u2019s Disease Neuroimaging Initiative","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093845484","display_name":"Cagri Ozdemir","orcid":null},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I4210154513","display_name":"Sunny BioDiscovery (United States)","ror":"https://ror.org/04x5cyt12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210154513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cagri Ozdemir","raw_affiliation_strings":["BioDiscovery Institute, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,"],"affiliations":[{"raw_affiliation_string":"BioDiscovery Institute, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039762113","display_name":"Yashu Vashishath","orcid":null},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I4210154513","display_name":"Sunny BioDiscovery (United States)","ror":"https://ror.org/04x5cyt12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210154513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yashu Vashishath","raw_affiliation_strings":["BioDiscovery Institute, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,"],"affiliations":[{"raw_affiliation_string":"BioDiscovery Institute, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072283349","display_name":"Serdar Bozdag","orcid":"https://orcid.org/0000-0002-4813-4310"},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I4210154513","display_name":"Sunny BioDiscovery (United States)","ror":"https://ror.org/04x5cyt12","country_code":"US","type":"company","lineage":["https://openalex.org/I4210154513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Serdar Bozdag","raw_affiliation_strings":["BioDiscovery Institute, University of North Texas , Denton, TX 76203,","Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","Department of Mathematics, University of North Texas , Denton, TX 76203,"],"affiliations":[{"raw_affiliation_string":"BioDiscovery Institute, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"]},{"raw_affiliation_string":"Center for Computational Life Sciences USA, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]},{"raw_affiliation_string":"Department of Mathematics, University of North Texas , Denton, TX 76203,","institution_ids":["https://openalex.org/I123534392"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5093845484"],"corresponding_institution_ids":["https://openalex.org/I123534392","https://openalex.org/I4210154513"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":4.0365,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.9382656,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"41","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9782000184059143,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6596565246582031},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5958786606788635},{"id":"https://openalex.org/keywords/convolution","display_name":"Convolution (computer science)","score":0.5821071267127991},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.5606886744499207},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46139097213745117},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.45633643865585327},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.44913214445114136},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3432368040084839},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33390823006629944},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29629266262054443},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.25570252537727356},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24819737672805786},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20053783059120178},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.12057819962501526},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08807849884033203},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0790376365184784},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.06728771328926086}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6596565246582031},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5958786606788635},{"id":"https://openalex.org/C45347329","wikidata":"https://www.wikidata.org/wiki/Q5166604","display_name":"Convolution (computer science)","level":3,"score":0.5821071267127991},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.5606886744499207},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46139097213745117},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.45633643865585327},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.44913214445114136},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3432368040084839},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33390823006629944},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29629266262054443},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.25570252537727356},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24819737672805786},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20053783059120178},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.12057819962501526},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08807849884033203},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0790376365184784},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.06728771328926086}],"mesh":[{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf313","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf313","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40468582","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40468582","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12204196","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12204196","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf313","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf313","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8135516887","display_name":null,"funder_award_id":"R35GM133657","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W103340358","https://openalex.org/W113731422","https://openalex.org/W1534250619","https://openalex.org/W1921762067","https://openalex.org/W2037132500","https://openalex.org/W2085245632","https://openalex.org/W2096573862","https://openalex.org/W2110014787","https://openalex.org/W2119046783","https://openalex.org/W2122328291","https://openalex.org/W2132619562","https://openalex.org/W2161289668","https://openalex.org/W2230320310","https://openalex.org/W2266524792","https://openalex.org/W2410641764","https://openalex.org/W2555897561","https://openalex.org/W2568859793","https://openalex.org/W2594475271","https://openalex.org/W2605944716","https://openalex.org/W2888175508","https://openalex.org/W2892207908","https://openalex.org/W2911286998","https://openalex.org/W2921485464","https://openalex.org/W2942678593","https://openalex.org/W2951209146","https://openalex.org/W2955251857","https://openalex.org/W2955502047","https://openalex.org/W2994638938","https://openalex.org/W3101157809","https://openalex.org/W3124714540","https://openalex.org/W3160991066","https://openalex.org/W3170986249","https://openalex.org/W4200070862","https://openalex.org/W4200330357","https://openalex.org/W4200378091","https://openalex.org/W4200402673","https://openalex.org/W4220763302","https://openalex.org/W4220888995","https://openalex.org/W4280605145","https://openalex.org/W4283312665","https://openalex.org/W4297733535","https://openalex.org/W4308696487","https://openalex.org/W4318275377","https://openalex.org/W4324009301","https://openalex.org/W4328129481","https://openalex.org/W4367051143","https://openalex.org/W4380303551","https://openalex.org/W4380589784","https://openalex.org/W4382787257","https://openalex.org/W4392238005","https://openalex.org/W4393185961","https://openalex.org/W4394575579","https://openalex.org/W4403558086","https://openalex.org/W4406386584","https://openalex.org/W6730323794","https://openalex.org/W6771374021","https://openalex.org/W6785950137","https://openalex.org/W6865114403"],"related_works":["https://openalex.org/W112583468","https://openalex.org/W96119380","https://openalex.org/W3023706879","https://openalex.org/W4298030740","https://openalex.org/W4404588215","https://openalex.org/W2108949684","https://openalex.org/W4246773350","https://openalex.org/W4223912550","https://openalex.org/W1965976436","https://openalex.org/W2281038790"],"abstract_inverted_index":{"The":[0],"source":[1],"code":[2],"is":[3],"available":[4],"at":[5],"https://github.com/bozdaglab/IGCN.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":2}],"updated_date":"2026-03-29T08:15:47.926485","created_date":"2025-10-10T00:00:00"}
