{"id":"https://openalex.org/W4410348611","doi":"https://doi.org/10.1093/bioinformatics/btaf301","title":"Predicting ustekinumab treatment response in Crohn\u2019s disease using pre-treatment biopsy images","display_name":"Predicting ustekinumab treatment response in Crohn\u2019s disease using pre-treatment biopsy images","publication_year":2025,"publication_date":"2025-05-14","ids":{"openalex":"https://openalex.org/W4410348611","doi":"https://doi.org/10.1093/bioinformatics/btaf301","pmid":"https://pubmed.ncbi.nlm.nih.gov/40366737"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf301","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf301","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf301/63180604/btaf301.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf301/63180604/btaf301.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051527826","display_name":"Chengfei Cai","orcid":"https://orcid.org/0000-0002-9582-0348"},"institutions":[{"id":"https://openalex.org/I200845125","display_name":"Nanjing University of Information Science and Technology","ror":"https://ror.org/02y0rxk19","country_code":"CN","type":"education","lineage":["https://openalex.org/I200845125"]},{"id":"https://openalex.org/I36399199","display_name":"Nanjing University of Science and Technology","ror":"https://ror.org/00xp9wg62","country_code":"CN","type":"education","lineage":["https://openalex.org/I36399199"]},{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chengfei Cai","raw_affiliation_strings":["College of Information Engineering, Taizhou University , Taizhou 225300,","Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","School of Automation, Nanjing University of Information Science and Technology , Nanjing 210044,","Taizhou University College of Information Engineering, , Taizhou 225300,","Nanjing University of Information Science and Technology School of Automation, , Nanjing 210044,","Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,"],"raw_orcid":"https://orcid.org/0000-0002-9582-0348","affiliations":[{"raw_affiliation_string":"College of Information Engineering, Taizhou University , Taizhou 225300,","institution_ids":["https://openalex.org/I82760581"]},{"raw_affiliation_string":"Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","institution_ids":["https://openalex.org/I36399199"]},{"raw_affiliation_string":"School of Automation, Nanjing University of Information Science and Technology , Nanjing 210044,","institution_ids":["https://openalex.org/I200845125","https://openalex.org/I36399199"]},{"raw_affiliation_string":"Taizhou University College of Information Engineering, , Taizhou 225300,","institution_ids":["https://openalex.org/I82760581"]},{"raw_affiliation_string":"Nanjing University of Information Science and Technology School of Automation, , Nanjing 210044,","institution_ids":["https://openalex.org/I200845125"]},{"raw_affiliation_string":"Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,","institution_ids":["https://openalex.org/I200845125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072326707","display_name":"Ruidong Chen","orcid":"https://orcid.org/0000-0003-0163-979X"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]},{"id":"https://openalex.org/I4210124971","display_name":"Second Affiliated Hospital of Soochow University","ror":"https://ror.org/02xjrkt08","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210124971"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruidong Chen","raw_affiliation_strings":["Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]},{"raw_affiliation_string":"the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101719888","display_name":"Jieyu Chen","orcid":"https://orcid.org/0000-0002-8151-5916"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]},{"id":"https://openalex.org/I4210111013","display_name":"Nanjing Drum Tower Hospital","ror":"https://ror.org/026axqv54","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210111013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jieyu Chen","raw_affiliation_strings":["Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]},{"raw_affiliation_string":"Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]},{"raw_affiliation_string":"Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100361632","display_name":"Jun Li","orcid":"https://orcid.org/0000-0001-6194-3668"},"institutions":[{"id":"https://openalex.org/I200845125","display_name":"Nanjing University of Information Science and Technology","ror":"https://ror.org/02y0rxk19","country_code":"CN","type":"education","lineage":["https://openalex.org/I200845125"]},{"id":"https://openalex.org/I36399199","display_name":"Nanjing University of Science and Technology","ror":"https://ror.org/00xp9wg62","country_code":"CN","type":"education","lineage":["https://openalex.org/I36399199"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Li","raw_affiliation_strings":["Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","institution_ids":["https://openalex.org/I36399199"]},{"raw_affiliation_string":"Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,","institution_ids":["https://openalex.org/I200845125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103061618","display_name":"Caiyun Lv","orcid":"https://orcid.org/0000-0002-2773-8879"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]},{"id":"https://openalex.org/I4210124971","display_name":"Second Affiliated Hospital of Soochow University","ror":"https://ror.org/02xjrkt08","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210124971"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Caiyun Lv","raw_affiliation_strings":["Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]},{"raw_affiliation_string":"the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067317933","display_name":"Yiping Jiao","orcid":"https://orcid.org/0000-0002-0787-3424"},"institutions":[{"id":"https://openalex.org/I200845125","display_name":"Nanjing University of Information Science and Technology","ror":"https://ror.org/02y0rxk19","country_code":"CN","type":"education","lineage":["https://openalex.org/I200845125"]},{"id":"https://openalex.org/I36399199","display_name":"Nanjing University of Science and Technology","ror":"https://ror.org/00xp9wg62","country_code":"CN","type":"education","lineage":["https://openalex.org/I36399199"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yiping Jiao","raw_affiliation_strings":["Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,"],"raw_orcid":"https://orcid.org/0000-0002-0787-3424","affiliations":[{"raw_affiliation_string":"Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","institution_ids":["https://openalex.org/I36399199"]},{"raw_affiliation_string":"Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,","institution_ids":["https://openalex.org/I200845125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101912538","display_name":"Lei Wu","orcid":"https://orcid.org/0000-0003-0235-7778"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lanqing Wu","raw_affiliation_strings":["Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","Medical College of Soochow University, Soochow University Department of Pathology and Pathophysiology, , Suzhou 215123,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]},{"raw_affiliation_string":"Medical College of Soochow University, Soochow University Department of Pathology and Pathophysiology, , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100359213","display_name":"Juan Chen","orcid":"https://orcid.org/0000-0002-5407-8239"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]},{"id":"https://openalex.org/I4210111013","display_name":"Nanjing Drum Tower Hospital","ror":"https://ror.org/026axqv54","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210111013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Juan Chen","raw_affiliation_strings":["Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","Medical College of Soochow University, Soochow University Department of Pathology and Pathophysiology, , Suzhou 215123,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]},{"raw_affiliation_string":"Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]},{"raw_affiliation_string":"Medical College of Soochow University, Soochow University Department of Pathology and Pathophysiology, , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040075588","display_name":"Qi Sun","orcid":"https://orcid.org/0000-0003-4171-4272"},"institutions":[{"id":"https://openalex.org/I4210111013","display_name":"Nanjing Drum Tower Hospital","ror":"https://ror.org/026axqv54","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210111013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Sun","raw_affiliation_strings":["Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]},{"raw_affiliation_string":"Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110600305","display_name":"Qianyun Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210111013","display_name":"Nanjing Drum Tower Hospital","ror":"https://ror.org/026axqv54","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210111013"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qianyun Shi","raw_affiliation_strings":["Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]},{"raw_affiliation_string":"Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103043758","display_name":"Jun Xu","orcid":"https://orcid.org/0000-0003-4721-9045"},"institutions":[{"id":"https://openalex.org/I200845125","display_name":"Nanjing University of Information Science and Technology","ror":"https://ror.org/02y0rxk19","country_code":"CN","type":"education","lineage":["https://openalex.org/I200845125"]},{"id":"https://openalex.org/I36399199","display_name":"Nanjing University of Science and Technology","ror":"https://ror.org/00xp9wg62","country_code":"CN","type":"education","lineage":["https://openalex.org/I36399199"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Xu","raw_affiliation_strings":["Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, Nanjing University of Information Science and Technology , Nanjing 210044,","institution_ids":["https://openalex.org/I36399199"]},{"raw_affiliation_string":"Nanjing University of Information Science and Technology Jiangsu Key Laboratory of Intelligent Medical Image Computing, School of Artificial Intelligence, , Nanjing 210044,","institution_ids":["https://openalex.org/I200845125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104365498","display_name":"Tang Wen","orcid":null},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]},{"id":"https://openalex.org/I4210124971","display_name":"Second Affiliated Hospital of Soochow University","ror":"https://ror.org/02xjrkt08","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210124971"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wen Tang","raw_affiliation_strings":["Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]},{"raw_affiliation_string":"the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100463071","display_name":"Yao Liu","orcid":"https://orcid.org/0000-0002-2775-1643"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]},{"id":"https://openalex.org/I4210111013","display_name":"Nanjing Drum Tower Hospital","ror":"https://ror.org/026axqv54","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210111013"]},{"id":"https://openalex.org/I4210124971","display_name":"Second Affiliated Hospital of Soochow University","ror":"https://ror.org/02xjrkt08","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210124971"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yao Liu","raw_affiliation_strings":["Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","Medical College of Soochow University, Soochow University Department of Pathology and Pathophysiology, , Suzhou 215123,","the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,","Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gastroenterology, the Second Affiliated Hospital of Soochow University , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]},{"raw_affiliation_string":"Department of Pathology and Pathophysiology, Medical College of Soochow University, Soochow University , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]},{"raw_affiliation_string":"Department of Pathology, Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]},{"raw_affiliation_string":"Medical College of Soochow University, Soochow University Department of Pathology and Pathophysiology, , Suzhou 215123,","institution_ids":["https://openalex.org/I3923682"]},{"raw_affiliation_string":"the Second Affiliated Hospital of Soochow University Department of Gastroenterology, , Suzhou 215004,","institution_ids":["https://openalex.org/I3923682","https://openalex.org/I4210124971"]},{"raw_affiliation_string":"Nanjing Drum Tower Hospital, the Affiliated Hospital of Nanjing University Medical School Department of Pathology, , Nanjing 210008,","institution_ids":["https://openalex.org/I4210111013"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.04597469,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"41","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.5552999973297119,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.5552999973297119,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10134","display_name":"Inflammatory Bowel Disease","score":0.20080000162124634,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.07370000332593918,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.759361982345581},{"id":"https://openalex.org/keywords/ustekinumab","display_name":"Ustekinumab","score":0.7157261967658997},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6584342122077942},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6222060322761536},{"id":"https://openalex.org/keywords/vedolizumab","display_name":"Vedolizumab","score":0.5352473855018616},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5040873289108276},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4750628173351288},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.43609875440597534},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4253161549568176},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.4142359495162964},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.41170066595077515},{"id":"https://openalex.org/keywords/crohns-disease","display_name":"Crohn's disease","score":0.39761584997177124},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.32098591327667236},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21728819608688354},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1946008801460266},{"id":"https://openalex.org/keywords/infliximab","display_name":"Infliximab","score":0.11080560088157654},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07898586988449097}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.759361982345581},{"id":"https://openalex.org/C2778975655","wikidata":"https://www.wikidata.org/wiki/Q420305","display_name":"Ustekinumab","level":4,"score":0.7157261967658997},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6584342122077942},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6222060322761536},{"id":"https://openalex.org/C2776207728","wikidata":"https://www.wikidata.org/wiki/Q7918002","display_name":"Vedolizumab","level":4,"score":0.5352473855018616},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5040873289108276},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4750628173351288},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.43609875440597534},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4253161549568176},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.4142359495162964},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.41170066595077515},{"id":"https://openalex.org/C2779280984","wikidata":"https://www.wikidata.org/wiki/Q1472","display_name":"Crohn's disease","level":3,"score":0.39761584997177124},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.32098591327667236},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21728819608688354},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1946008801460266},{"id":"https://openalex.org/C2777138892","wikidata":"https://www.wikidata.org/wiki/Q415264","display_name":"Infliximab","level":3,"score":0.11080560088157654},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07898586988449097}],"mesh":[{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000069549","descriptor_name":"Ustekinumab","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D003424","descriptor_name":"Crohn Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016896","descriptor_name":"Treatment Outcome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf301","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf301","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf301/63180604/btaf301.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40366737","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40366737","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:10946716","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12133262","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf301","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf301","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf301/63180604/btaf301.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7400000095367432,"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10"}],"awards":[{"id":"https://openalex.org/G1303743867","display_name":null,"funder_award_id":"92159301","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1791764293","display_name":null,"funder_award_id":"82302352","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2855840885","display_name":null,"funder_award_id":"62171230","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3350382349","display_name":null,"funder_award_id":"62401272","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4172164467","display_name":null,"funder_award_id":"2023YFC3402800","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G6092376103","display_name":null,"funder_award_id":"62301265","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G64983649","display_name":null,"funder_award_id":"82441029","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7101650428","display_name":null,"funder_award_id":"82302291","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G798240171","display_name":null,"funder_award_id":"62302228","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8201922156","display_name":null,"funder_award_id":"62101365","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8572582817","display_name":null,"funder_award_id":"62301263","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320324852","display_name":"Nanjing University","ror":"https://ror.org/01rxvg760"},{"id":"https://openalex.org/F4320330237","display_name":"Nanjing Drum Tower Hospital","ror":"https://ror.org/026axqv54"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410348611.pdf","grobid_xml":"https://content.openalex.org/works/W4410348611.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1991810959","https://openalex.org/W2041606152","https://openalex.org/W2074080039","https://openalex.org/W2085127303","https://openalex.org/W2112635226","https://openalex.org/W2129112648","https://openalex.org/W2155889930","https://openalex.org/W2321453230","https://openalex.org/W2343160907","https://openalex.org/W2509553455","https://openalex.org/W2614318748","https://openalex.org/W2804431571","https://openalex.org/W2895763047","https://openalex.org/W2902845602","https://openalex.org/W2904024306","https://openalex.org/W2911605224","https://openalex.org/W2914568698","https://openalex.org/W2919115771","https://openalex.org/W2948930564","https://openalex.org/W2994822355","https://openalex.org/W3135547872","https://openalex.org/W3138848412","https://openalex.org/W3160261825","https://openalex.org/W3197792703","https://openalex.org/W4200111739","https://openalex.org/W4205253993","https://openalex.org/W4205601010","https://openalex.org/W4224214940","https://openalex.org/W4233817719","https://openalex.org/W4281671518","https://openalex.org/W4283645969","https://openalex.org/W4283754248","https://openalex.org/W4291310117","https://openalex.org/W4313830579","https://openalex.org/W4316038054","https://openalex.org/W4379966896","https://openalex.org/W4385827562","https://openalex.org/W4387531546","https://openalex.org/W4389228851","https://openalex.org/W4389924824","https://openalex.org/W4390619786","https://openalex.org/W6756748170"],"related_works":["https://openalex.org/W3167740445","https://openalex.org/W4304189891","https://openalex.org/W4391162387","https://openalex.org/W2791707140","https://openalex.org/W4200412501","https://openalex.org/W4220743512","https://openalex.org/W4391242758","https://openalex.org/W4380085022","https://openalex.org/W3086495577","https://openalex.org/W3004564152"],"abstract_inverted_index":{"MOTIVATION:":[0],"Crohn's":[1],"disease":[2],"(CD)":[3],"exhibits":[4],"substantial":[5],"variability":[6],"in":[7,235,242],"response":[8,100,182,234],"to":[9,29,82,96,124,144,176],"biological":[10,232],"therapies":[11],"such":[12],"as":[13],"ustekinumab":[14],"(UST),":[15],"a":[16,69,89,114,138,153,178],"monoclonal":[17],"antibody":[18],"targeting":[19],"interleukin-12/23.":[20],"However,":[21],"predicting":[22],"individual":[23],"treatment":[24,99,133,240],"responses":[25],"remains":[26],"difficult":[27],"due":[28],"the":[30,37],"lack":[31,53],"of":[32,40,104,203,209,213,231],"reliable":[33],"histopathological":[34],"biomarkers":[35],"and":[36,60,76,119,168,211,228],"morphological":[38,127],"complexity":[39],"tissue.":[41],"While":[42],"recent":[43],"deep":[44],"learning":[45,94,155],"methods":[46],"have":[47],"leveraged":[48],"whole-slide":[49,159],"images":[50],"(WSIs),":[51],"most":[52],"effective":[54],"mechanisms":[55],"for":[56,180],"selecting":[57],"relevant":[58],"regions":[59],"integrating":[61],"patch-level":[62,149,217],"evidence":[63],"into":[64],"robust":[65],"patient-level":[66],"predictions.":[67],"Therefore,":[68],"framework":[70,95],"that":[71,192,222],"captures":[72],"local":[73],"histological":[74],"cues":[75],"global":[77],"tissue":[78],"context":[79],"is":[80],"needed":[81],"improve":[83],"prediction":[84,230],"performance.":[85],"RESULTS:":[86],"We":[87],"propose":[88],"novel":[90],"clustering-enhanced":[91],"weakly":[92],"supervised":[93],"predict":[97],"UST":[98],"from":[101,109,157],"pre-treatment":[102],"WSIs":[103,110],"CD":[105],"patients.":[106],"First,":[107],"patches":[108,130],"were":[111,135,161,173],"encoded":[112],"using":[113,163],"pre-trained":[115],"vision":[116],"foundation":[117],"model,":[118],"k-means":[120],"clustering":[121],"was":[122],"applied":[123],"identify":[125],"representative":[126],"patterns.":[128],"Discriminative":[129],"associated":[131],"with":[132,141,200],"outcomes":[134],"selected":[136],"via":[137],"DenseNet-based":[139],"classifier,":[140],"Grad-CAM":[142],"used":[143,175],"enhance":[145],"interpretability.":[146],"To":[147],"aggregate":[148],"predictions,":[150],"we":[151],"adopted":[152],"multi-instance":[154],"approach,":[156],"which":[158],"features":[160,172],"extracted":[162],"both":[164],"patch":[165],"likelihood":[166],"histograms":[167],"bag-of-words":[169],"representations.":[170],"These":[171,219],"subsequently":[174],"train":[177],"classifier":[179],"final":[181],"prediction.":[183],"Experimental":[184],"results":[185],"on":[186],"an":[187,201],"independent":[188],"test":[189],"set":[190],"demonstrated":[191],"our":[193,223],"WSI-level":[194],"model":[195],"achieved":[196],"superior":[197],"predictive":[198],"performance":[199],"AUC":[202],"0.938":[204],"(95%":[205],"CI:":[206],"0.879-0.996),":[207],"sensitivity":[208],"0.951,":[210],"specificity":[212],"0.825,":[214],"outperforming":[215],"baseline":[216],"models.":[218],"findings":[220],"suggest":[221],"method":[224],"enables":[225],"accurate,":[226],"interpretable,":[227],"scalable":[229],"therapy":[233],"CD,":[236],"potentially":[237],"supporting":[238],"personalized":[239],"strategies":[241],"clinical":[243],"settings.":[244],"AVAILABILITY":[245],"AND":[246],"IMPLEMENTATION:":[247],"https://github.com/caicai2526/USTAIM.":[248]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
