{"id":"https://openalex.org/W4410118478","doi":"https://doi.org/10.1093/bioinformatics/btaf285","title":"MSNGO: multi-species protein function annotation based on 3D protein structure and network propagation","display_name":"MSNGO: multi-species protein function annotation based on 3D protein structure and network propagation","publication_year":2025,"publication_date":"2025-05-01","ids":{"openalex":"https://openalex.org/W4410118478","doi":"https://doi.org/10.1093/bioinformatics/btaf285","pmid":"https://pubmed.ncbi.nlm.nih.gov/40327458"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf285","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf285","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf285/63069972/btaf285.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf285/63069972/btaf285.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100335573","display_name":"Beibei Wang","orcid":"https://orcid.org/0000-0003-2193-3777"},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Beibei Wang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I4210152380","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103099958","display_name":"Bo Cui","orcid":"https://orcid.org/0000-0002-5954-9669"},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Boyue Cui","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I4210152380","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015170732","display_name":"Shiqu Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shiqu Chen","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I4210152380","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100328995","display_name":"Xuan Wang","orcid":"https://orcid.org/0000-0002-3512-0649"},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuan Wang","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","Harbin Institute of Technology (Shenzhen) Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, , Shenzhen, Guangdong 518055,"],"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I4210152380","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Yadong Wang","orcid":"https://orcid.org/0000-0001-6500-6217"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210161462","display_name":"Heilongjiang Institute of Technology","ror":"https://ror.org/05x0m9n95","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210161462"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yadong Wang","raw_affiliation_strings":["Center for Bioinformatics, Faculty of Computing, Harbin Institute of Technology , Harbin, Heilongjiang 150001,","Key Laboratory of Biological Bigdata, Ministry of Education, Harbin Institute of Technology , Harbin, Heilongjiang 150001,","Harbin Institute of Technology Key Laboratory of Biological Bigdata, Ministry of Education, , Harbin, Heilongjiang 150001,","Harbin Institute of Technology Center for Bioinformatics, faculty of computing, , Harbin, Heilongjiang 150001,"],"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, Faculty of Computing, Harbin Institute of Technology , Harbin, Heilongjiang 150001,","institution_ids":["https://openalex.org/I4210161462","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Key Laboratory of Biological Bigdata, Ministry of Education, Harbin Institute of Technology , Harbin, Heilongjiang 150001,","institution_ids":["https://openalex.org/I4210161462","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology Key Laboratory of Biological Bigdata, Ministry of Education, , Harbin, Heilongjiang 150001,","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology Center for Bioinformatics, faculty of computing, , Harbin, Heilongjiang 150001,","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"last","author":{"id":null,"display_name":"Junyi Li","orcid":"https://orcid.org/0000-0001-8045-5264"},"institutions":[{"id":"https://openalex.org/I158809036","display_name":"Shenzhen Institute of Information Technology","ror":"https://ror.org/03wrf9427","country_code":"CN","type":"education","lineage":["https://openalex.org/I158809036"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210152380","display_name":"Shenzhen Technology University","ror":"https://ror.org/04qzpec27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210152380"]},{"id":"https://openalex.org/I4210161462","display_name":"Heilongjiang Institute of Technology","ror":"https://ror.org/05x0m9n95","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210161462"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junyi Li","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","Key Laboratory of Biological Bigdata, Ministry of Education, Harbin Institute of Technology , Harbin, Heilongjiang 150001,","School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","Harbin Institute of Technology (Shenzhen) Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, , Shenzhen, Guangdong 518055,","Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","Harbin Institute of Technology Key Laboratory of Biological Bigdata, Ministry of Education, , Harbin, Heilongjiang 150001,"],"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036"]},{"raw_affiliation_string":"Key Laboratory of Biological Bigdata, Ministry of Education, Harbin Institute of Technology , Harbin, Heilongjiang 150001,","institution_ids":["https://openalex.org/I4210161462","https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen) , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I158809036","https://openalex.org/I4210152380","https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) Guangdong Provincial Key Laboratory of Novel Security Intelligence Technologies, , Shenzhen, Guangdong 518055,","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology (Shenzhen) School of Computer Science and Technology, , Shenzhen, Guang Dong 518055,","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"Harbin Institute of Technology Key Laboratory of Biological Bigdata, Ministry of Education, , Harbin, Heilongjiang 150001,","institution_ids":["https://openalex.org/I204983213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5100335573"],"corresponding_institution_ids":["https://openalex.org/I158809036","https://openalex.org/I204983213","https://openalex.org/I4210152380"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.5251,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.8173414,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"41","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7545944452285767},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.7156322598457336},{"id":"https://openalex.org/keywords/pooling","display_name":"Pooling","score":0.6604329347610474},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5443198084831238},{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.5365308523178101},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.523062527179718},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4624690115451813},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4447343349456787},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.424589067697525},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4034270644187927},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.3817686438560486},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2213820517063141},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1371210813522339}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7545944452285767},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.7156322598457336},{"id":"https://openalex.org/C70437156","wikidata":"https://www.wikidata.org/wiki/Q7228652","display_name":"Pooling","level":2,"score":0.6604329347610474},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5443198084831238},{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.5365308523178101},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.523062527179718},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4624690115451813},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4447343349456787},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.424589067697525},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4034270644187927},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.3817686438560486},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2213820517063141},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1371210813522339},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf285","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf285","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf285/63069972/btaf285.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40327458","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40327458","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12122197","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12122197","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf285","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf285","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf285/63069972/btaf285.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.6899999976158142}],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1477544716","display_name":null,"funder_award_id":"Guangdong","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1486008571","display_name":null,"funder_award_id":"32470704","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3309074268","display_name":null,"funder_award_id":"2010005","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6662135534","display_name":null,"funder_award_id":"2021YFA0910700","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7349572720","display_name":null,"funder_award_id":"2022B1212010005","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410118478.pdf","grobid_xml":"https://content.openalex.org/works/W4410118478.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W2056124433","https://openalex.org/W2081741335","https://openalex.org/W2101291993","https://openalex.org/W2103017472","https://openalex.org/W2108984616","https://openalex.org/W2900569176","https://openalex.org/W3112376646","https://openalex.org/W3126817587","https://openalex.org/W3143063265","https://openalex.org/W3146944767","https://openalex.org/W3164046276","https://openalex.org/W3177828909","https://openalex.org/W3179436811","https://openalex.org/W3211795435","https://openalex.org/W4200166788","https://openalex.org/W4306734496","https://openalex.org/W4360938460","https://openalex.org/W4383058125","https://openalex.org/W4387701164","https://openalex.org/W4404092049","https://openalex.org/W4405837413","https://openalex.org/W4406002713"],"related_works":["https://openalex.org/W2094822546","https://openalex.org/W4388708026","https://openalex.org/W1969080446","https://openalex.org/W3108941781","https://openalex.org/W1578069856","https://openalex.org/W2134206588","https://openalex.org/W2084200259","https://openalex.org/W2065993463","https://openalex.org/W4400576356","https://openalex.org/W2401071219"],"abstract_inverted_index":{"https://github.com/blingbell/MSNGO.":[0]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
