{"id":"https://openalex.org/W4412454105","doi":"https://doi.org/10.1093/bioinformatics/btaf259","title":"ADME-drug-likeness: enriching molecular foundation models via pharmacokinetics-guided multi-task learning for drug-likeness prediction","display_name":"ADME-drug-likeness: enriching molecular foundation models via pharmacokinetics-guided multi-task learning for drug-likeness prediction","publication_year":2025,"publication_date":"2025-07-01","ids":{"openalex":"https://openalex.org/W4412454105","doi":"https://doi.org/10.1093/bioinformatics/btaf259","pmid":"https://pubmed.ncbi.nlm.nih.gov/40662819"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf259","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf259","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/41/Supplement_1/i352/63745580/btaf259.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/41/Supplement_1/i352/63745580/btaf259.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057875428","display_name":"Dongmin Bang","orcid":"https://orcid.org/0000-0001-9217-8380"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210151723","display_name":"Institute of Refrigeration","ror":"https://ror.org/046jmy298","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210151723"]}],"countries":["GB","KR"],"is_corresponding":true,"raw_author_name":"Dongmin Bang","raw_affiliation_strings":["AIGENDRUG Co., Ltd , Seoul, 08758,","Interdisciplinary Program in Bioinformatics, Seoul National University , Seoul, 08826,"],"affiliations":[{"raw_affiliation_string":"AIGENDRUG Co., Ltd , Seoul, 08758,","institution_ids":["https://openalex.org/I4210151723"]},{"raw_affiliation_string":"Interdisciplinary Program in Bioinformatics, Seoul National University , Seoul, 08826,","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Juyeon Kim","orcid":"https://orcid.org/0009-0000-1074-2102"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I2802457231","display_name":"New Generation University College","ror":"https://ror.org/015aem925","country_code":"ET","type":"education","lineage":["https://openalex.org/I2802457231"]}],"countries":["ET","KR"],"is_corresponding":false,"raw_author_name":"Juyeon Kim","raw_affiliation_strings":["Department of Statistics, Seoul National University , Seoul, 08826,"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, Seoul National University , Seoul, 08826,","institution_ids":["https://openalex.org/I139264467","https://openalex.org/I2802457231"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Haerin Song","orcid":"https://orcid.org/0009-0008-3199-0138"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210164862","display_name":"Artificial Intelligence in Medicine (Canada)","ror":"https://ror.org/05p590m36","country_code":"CA","type":"company","lineage":["https://openalex.org/I4210164862"]}],"countries":["CA","KR"],"is_corresponding":false,"raw_author_name":"Haerin Song","raw_affiliation_strings":["Interdisciplinary Program in Artificial Intelligence, Seoul National University , Seoul, 08826,"],"affiliations":[{"raw_affiliation_string":"Interdisciplinary Program in Artificial Intelligence, Seoul National University , Seoul, 08826,","institution_ids":["https://openalex.org/I139264467","https://openalex.org/I4210164862"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100460439","display_name":"\ufeffSun Kim","orcid":"https://orcid.org/0000-0001-5385-9546"},"institutions":[{"id":"https://openalex.org/I118373667","display_name":"Seoul National University of Science and Technology","ror":"https://ror.org/00chfja07","country_code":"KR","type":"education","lineage":["https://openalex.org/I118373667"]},{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210151723","display_name":"Institute of Refrigeration","ror":"https://ror.org/046jmy298","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210151723"]},{"id":"https://openalex.org/I4210164862","display_name":"Artificial Intelligence in Medicine (Canada)","ror":"https://ror.org/05p590m36","country_code":"CA","type":"company","lineage":["https://openalex.org/I4210164862"]}],"countries":["CA","GB","KR"],"is_corresponding":false,"raw_author_name":"Sun Kim","raw_affiliation_strings":["AIGENDRUG Co., Ltd , Seoul, 08758,","Department of Computer Science and Engineering, Seoul National University , Seoul, 08826,","Interdisciplinary Program in Artificial Intelligence, Seoul National University , Seoul, 08826,","Interdisciplinary Program in Bioinformatics, Seoul National University , Seoul, 08826,"],"affiliations":[{"raw_affiliation_string":"AIGENDRUG Co., Ltd , Seoul, 08758,","institution_ids":["https://openalex.org/I4210151723"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Seoul National University , Seoul, 08826,","institution_ids":["https://openalex.org/I139264467","https://openalex.org/I118373667"]},{"raw_affiliation_string":"Interdisciplinary Program in Artificial Intelligence, Seoul National University , Seoul, 08826,","institution_ids":["https://openalex.org/I139264467","https://openalex.org/I4210164862"]},{"raw_affiliation_string":"Interdisciplinary Program in Bioinformatics, Seoul National University , Seoul, 08826,","institution_ids":["https://openalex.org/I139264467"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5057875428"],"corresponding_institution_ids":["https://openalex.org/I139264467","https://openalex.org/I4210151723"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":8.5199,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.97806323,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":"41","issue":"Supplement_1","first_page":"i352","last_page":"i361"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10375","display_name":"Pharmacogenetics and Drug Metabolism","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adme","display_name":"ADME","score":0.9598708152770996},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6141070127487183},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.48997655510902405},{"id":"https://openalex.org/keywords/drug-development","display_name":"Drug development","score":0.4557913541793823},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.4147738218307495},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3883649706840515},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38236844539642334},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3487582206726074},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.2289988398551941},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21559062600135803},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13562345504760742},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10848832130432129}],"concepts":[{"id":"https://openalex.org/C69366308","wikidata":"https://www.wikidata.org/wiki/Q2272286","display_name":"ADME","level":3,"score":0.9598708152770996},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6141070127487183},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.48997655510902405},{"id":"https://openalex.org/C64903051","wikidata":"https://www.wikidata.org/wiki/Q2198549","display_name":"Drug development","level":3,"score":0.4557913541793823},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.4147738218307495},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3883649706840515},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38236844539642334},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3487582206726074},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.2289988398551941},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21559062600135803},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13562345504760742},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10848832130432129}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010599","descriptor_name":"Pharmacokinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010599","descriptor_name":"Pharmacokinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010599","descriptor_name":"Pharmacokinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010599","descriptor_name":"Pharmacokinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf259","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf259","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/41/Supplement_1/i352/63745580/btaf259.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40662819","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40662819","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12261486","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12261486","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf259","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf259","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/41/Supplement_1/i352/63745580/btaf259.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F2467035380","display_name":"AIGENDRUG","ror":null},{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320321292","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542"},{"id":"https://openalex.org/F4320328359","display_name":"Ministry of Science and ICT, South Korea","ror":"https://ror.org/01wpjm123"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4412454105.pdf","grobid_xml":"https://content.openalex.org/works/W4412454105.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W571636304","https://openalex.org/W1893477900","https://openalex.org/W1980474822","https://openalex.org/W2010427019","https://openalex.org/W2026736116","https://openalex.org/W2034549041","https://openalex.org/W2096541451","https://openalex.org/W2177317049","https://openalex.org/W2263138261","https://openalex.org/W3094640617","https://openalex.org/W3106539628","https://openalex.org/W3207161423","https://openalex.org/W4200583473","https://openalex.org/W4214868967","https://openalex.org/W4248107770","https://openalex.org/W4255633166","https://openalex.org/W4304731455","https://openalex.org/W4306353220","https://openalex.org/W4306842004","https://openalex.org/W4387879280","https://openalex.org/W4388615774","https://openalex.org/W4390619064","https://openalex.org/W4393936599","https://openalex.org/W4404252717","https://openalex.org/W6771876938"],"related_works":["https://openalex.org/W2169495846","https://openalex.org/W1972857466","https://openalex.org/W2156868660","https://openalex.org/W942515233","https://openalex.org/W1987184004","https://openalex.org/W4220992614","https://openalex.org/W3208474210","https://openalex.org/W2064585714","https://openalex.org/W2143785169","https://openalex.org/W8127528"],"abstract_inverted_index":{"The":[0],"source":[1],"code":[2],"for":[3],"ADME-DL":[4],"is":[5],"available":[6],"at":[7],"https://github.com/eugenebang/ADME-DL.":[8]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
