{"id":"https://openalex.org/W4410028359","doi":"https://doi.org/10.1093/bioinformatics/btaf141","title":"Enhancing privacy in biosecurity with watermarked protein design","display_name":"Enhancing privacy in biosecurity with watermarked protein design","publication_year":2025,"publication_date":"2025-05-02","ids":{"openalex":"https://openalex.org/W4410028359","doi":"https://doi.org/10.1093/bioinformatics/btaf141","pmid":"https://pubmed.ncbi.nlm.nih.gov/40315154"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf141","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf141","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf141/63045435/btaf141.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf141/63045435/btaf141.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074768496","display_name":"Yanshuo Chen","orcid":"https://orcid.org/0000-0001-6675-2449"},"institutions":[{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]},{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["IN","US"],"is_corresponding":true,"raw_author_name":"Yanshuo Chen","raw_affiliation_strings":["Center of Bioinformatics and Computational Biology , College Park, MD 20740,","Department of Computer Science, University of Maryland , College Park, MD 20742,","University of Maryland Department of Computer Science, , College Park, MD 20742,","Center of Bioinformatics and Computational Biology , MD 20740,"],"affiliations":[{"raw_affiliation_string":"Center of Bioinformatics and Computational Biology , College Park, MD 20740,","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Department of Computer Science, University of Maryland , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"University of Maryland Department of Computer Science, , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"Center of Bioinformatics and Computational Biology , MD 20740,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101950687","display_name":"Zhengmian Hu","orcid":"https://orcid.org/0000-0003-0316-146X"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhengmian Hu","raw_affiliation_strings":["Department of Computer Science, University of Maryland , College Park, MD 20742,","University of Maryland Department of Computer Science, , College Park, MD 20742,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Maryland , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"University of Maryland Department of Computer Science, , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046735576","display_name":"Yihan Wu","orcid":"https://orcid.org/0000-0003-2718-8704"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yihan Wu","raw_affiliation_strings":["Department of Computer Science, University of Maryland , College Park, MD 20742,","University of Maryland Department of Computer Science, , College Park, MD 20742,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Maryland , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"University of Maryland Department of Computer Science, , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044919251","display_name":"Ruibo Chen","orcid":"https://orcid.org/0000-0002-2242-7465"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ruibo Chen","raw_affiliation_strings":["Department of Computer Science, University of Maryland , College Park, MD 20742,","University of Maryland Department of Computer Science, , College Park, MD 20742,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Maryland , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"University of Maryland Department of Computer Science, , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109712901","display_name":"Yongrui Jin","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210134579","display_name":"Dana-Farber/Harvard Cancer Center","ror":"https://ror.org/03pvyf116","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210117453","https://openalex.org/I4210134579"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yongrui Jin","raw_affiliation_strings":["Graduate School of Design, Harvard University , Boston, MA 02138,","Harvard University Graduate School of Design, , MA 02138,"],"affiliations":[{"raw_affiliation_string":"Graduate School of Design, Harvard University , Boston, MA 02138,","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210134579"]},{"raw_affiliation_string":"Harvard University Graduate School of Design, , MA 02138,","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110931780","display_name":"Mengling Zhan","orcid":null},"institutions":[{"id":"https://openalex.org/I4210125989","display_name":"Sewickley Valley Hospital","ror":"https://ror.org/03c8ed890","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210125989"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcus Zhan","raw_affiliation_strings":["Sewickley Academy , Sewickley, PA 15143,"],"affiliations":[{"raw_affiliation_string":"Sewickley Academy , Sewickley, PA 15143,","institution_ids":["https://openalex.org/I4210125989"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060206469","display_name":"Chuanxiao Xie","orcid":"https://orcid.org/0000-0003-3425-0211"},"institutions":[{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chengjin Xie","raw_affiliation_strings":["College of Economics and Management, China Agricultural University , Beijing 100083,","China Agricultural University College of Economics and Management, , Beijing, 100083,"],"affiliations":[{"raw_affiliation_string":"College of Economics and Management, China Agricultural University , Beijing 100083,","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"China Agricultural University College of Economics and Management, , Beijing, 100083,","institution_ids":["https://openalex.org/I52158045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100344560","display_name":"Wei Chen","orcid":"https://orcid.org/0000-0003-2275-4527"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]},{"id":"https://openalex.org/I4210130600","display_name":"Children's Hospital of Pittsburgh","ror":"https://ror.org/03763ep67","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210098814","https://openalex.org/I4210130600","https://openalex.org/I4210134769"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei Chen","raw_affiliation_strings":["Department of Biostatistics, University of Pittsburgh , Pittsburgh, PA 15261,","Department of Pediatrics, UPMC Children\u2019s Hospital of Pittsburgh , Pittsburgh, PA 15224,","UPMC Children\u2019s Hospital of Pittsburgh Department of Pediatrics, , PA 15224,","University of Pittsburgh Department of Biostatistics, , PA 15261,"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Pittsburgh , Pittsburgh, PA 15261,","institution_ids":["https://openalex.org/I170201317"]},{"raw_affiliation_string":"Department of Pediatrics, UPMC Children\u2019s Hospital of Pittsburgh , Pittsburgh, PA 15224,","institution_ids":["https://openalex.org/I4210130600"]},{"raw_affiliation_string":"UPMC Children\u2019s Hospital of Pittsburgh Department of Pediatrics, , PA 15224,","institution_ids":["https://openalex.org/I4210130600"]},{"raw_affiliation_string":"University of Pittsburgh Department of Biostatistics, , PA 15261,","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103907724","display_name":"Heng Huang","orcid":"https://orcid.org/0009-0006-2868-9323"},"institutions":[{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]},{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["IN","US"],"is_corresponding":false,"raw_author_name":"Heng Huang","raw_affiliation_strings":["Center of Bioinformatics and Computational Biology , College Park, MD 20740,","Department of Computer Science, University of Maryland , College Park, MD 20742,","Institute of Health Computing, University of Maryland , North Bethesda, MD 20852,","University of Maryland Department of Computer Science, , College Park, MD 20742,","Center of Bioinformatics and Computational Biology , MD 20740,"],"affiliations":[{"raw_affiliation_string":"Center of Bioinformatics and Computational Biology , College Park, MD 20740,","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Department of Computer Science, University of Maryland , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"Institute of Health Computing, University of Maryland , North Bethesda, MD 20852,","institution_ids":[]},{"raw_affiliation_string":"University of Maryland Department of Computer Science, , College Park, MD 20742,","institution_ids":["https://openalex.org/I66946132"]},{"raw_affiliation_string":"Center of Bioinformatics and Computational Biology , MD 20740,","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5074768496"],"corresponding_institution_ids":["https://openalex.org/I4210148697","https://openalex.org/I66946132"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.4497,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.79787618,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"41","issue":"7","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11241","display_name":"Advanced Malware Detection Techniques","score":0.9718999862670898,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11241","display_name":"Advanced Malware Detection Techniques","score":0.9718999862670898,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12122","display_name":"Physical Unclonable Functions (PUFs) and Hardware Security","score":0.9520000219345093,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11689","display_name":"Adversarial Robustness in Machine Learning","score":0.9318000078201294,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/watermark","display_name":"Watermark","score":0.7897816896438599},{"id":"https://openalex.org/keywords/biosecurity","display_name":"Biosecurity","score":0.7814517021179199},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7675768733024597},{"id":"https://openalex.org/keywords/digital-watermarking","display_name":"Digital watermarking","score":0.6567953824996948},{"id":"https://openalex.org/keywords/traceability","display_name":"Traceability","score":0.574949324131012},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.4855334758758545},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.39072054624557495},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37930363416671753},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3598330616950989},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3437338173389435},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.21852928400039673},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.14601242542266846}],"concepts":[{"id":"https://openalex.org/C164112704","wikidata":"https://www.wikidata.org/wiki/Q7974348","display_name":"Watermark","level":3,"score":0.7897816896438599},{"id":"https://openalex.org/C2781368420","wikidata":"https://www.wikidata.org/wiki/Q803874","display_name":"Biosecurity","level":2,"score":0.7814517021179199},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7675768733024597},{"id":"https://openalex.org/C150817343","wikidata":"https://www.wikidata.org/wiki/Q875932","display_name":"Digital watermarking","level":3,"score":0.6567953824996948},{"id":"https://openalex.org/C153876917","wikidata":"https://www.wikidata.org/wiki/Q899704","display_name":"Traceability","level":2,"score":0.574949324131012},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.4855334758758545},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.39072054624557495},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37930363416671753},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3598330616950989},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3437338173389435},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.21852928400039673},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.14601242542266846},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018907","descriptor_name":"Privacy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf141","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf141","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf141/63045435/btaf141.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40315154","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40315154","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12279293","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12279293","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf141","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf141","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf141/63045435/btaf141.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1616478382","display_name":null,"funder_award_id":"CCF 2348306","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2721289185","display_name":null,"funder_award_id":"2348169","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2869857317","display_name":null,"funder_award_id":"DBI 2405416","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3782954227","display_name":"Collaborative Research: CCRI: New: A Scalable Hardware and Software Environment Enabling Secure Multi-party Learning","funder_award_id":"2347617","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5995598075","display_name":null,"funder_award_id":"CNS 2347617","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6301008065","display_name":"A New Machine Learning Framework for Single-Cell Multi-Omics Bioinformatics","funder_award_id":"2405416","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7849508813","display_name":"Collaborative Research: PPoSS: LARGE: Co-designing  Hardware, Software, and Algorithms to Enable Extreme-Scale Machine Learning Systems","funder_award_id":"2348306","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8057332120","display_name":null,"funder_award_id":"IIS 2347592","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8667467031","display_name":"Collaborative Research: III: Medium: New Machine Learning Empowered Nanoinformatics System for Advancing Nanomaterial Design","funder_award_id":"2347592","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410028359.pdf","grobid_xml":"https://content.openalex.org/works/W4410028359.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W3177828909","https://openalex.org/W4288066876","https://openalex.org/W4296032638","https://openalex.org/W4318071656","https://openalex.org/W4327550249","https://openalex.org/W4391215141","https://openalex.org/W4391849830","https://openalex.org/W4392584581","https://openalex.org/W6706363465","https://openalex.org/W6765474767"],"related_works":["https://openalex.org/W2137394636","https://openalex.org/W2358993821","https://openalex.org/W1516446231","https://openalex.org/W2098152888","https://openalex.org/W1559740347","https://openalex.org/W2040356834","https://openalex.org/W2080353903","https://openalex.org/W2385289568","https://openalex.org/W2381486749","https://openalex.org/W1514507288"],"abstract_inverted_index":{"The":[0],"implementation":[1],"of":[2],"the":[3],"protein":[4],"watermark":[5],"framework":[6],"is":[7],"freely":[8],"available":[9],"to":[10],"noncommercial":[11],"users":[12],"at":[13],"https://github.com/poseidonchan/ProteinWatermark.":[14]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-04-02T15:55:50.835912","created_date":"2025-10-10T00:00:00"}
