{"id":"https://openalex.org/W4408845756","doi":"https://doi.org/10.1093/bioinformatics/btaf130","title":"MR.RGM: an R package for fitting Bayesian multivariate bidirectional Mendelian randomization networks","display_name":"MR.RGM: an R package for fitting Bayesian multivariate bidirectional Mendelian randomization networks","publication_year":2025,"publication_date":"2025-03-24","ids":{"openalex":"https://openalex.org/W4408845756","doi":"https://doi.org/10.1093/bioinformatics/btaf130","pmid":"https://pubmed.ncbi.nlm.nih.gov/40128153"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaf130","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf130","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf130/62593531/btaf130.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf130/62593531/btaf130.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102626623","display_name":"Bitan Sarkar","orcid":null},"institutions":[{"id":"https://openalex.org/I2801502816","display_name":"Texas College","ror":"https://ror.org/04fsb1973","country_code":"US","type":"education","lineage":["https://openalex.org/I2801502816"]},{"id":"https://openalex.org/I4210142440","display_name":"College Station Medical Center","ror":"https://ror.org/04663jx74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210142440"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Bitan Sarkar","raw_affiliation_strings":["De , College Station, TX 77843,","partment of Statistics, Texas A&M University , College Station, TX 77843,","Texas A&M University Department of Statistics, , College Station, TX United States 3143, 77843"],"affiliations":[{"raw_affiliation_string":"De , College Station, TX 77843,","institution_ids":["https://openalex.org/I4210142440","https://openalex.org/I2801502816"]},{"raw_affiliation_string":"partment of Statistics, Texas A&M University , College Station, TX 77843,","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Texas A&M University Department of Statistics, , College Station, TX United States 3143, 77843","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055505738","display_name":"Yang Ni","orcid":"https://orcid.org/0000-0003-0636-2363"},"institutions":[{"id":"https://openalex.org/I2801502816","display_name":"Texas College","ror":"https://ror.org/04fsb1973","country_code":"US","type":"education","lineage":["https://openalex.org/I2801502816"]},{"id":"https://openalex.org/I4210142440","display_name":"College Station Medical Center","ror":"https://ror.org/04663jx74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210142440"]},{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yang Ni","raw_affiliation_strings":["De , College Station, TX 77843,","The University of Texas Department of Statistics and Data Sciences, , Austin, TX 78705,","partment of Statistics, Texas A&M University , College Station, TX 77843,","Texas A&M University Department of Statistics, , College Station, TX United States 3143, 77843"],"affiliations":[{"raw_affiliation_string":"De , College Station, TX 77843,","institution_ids":["https://openalex.org/I4210142440","https://openalex.org/I2801502816"]},{"raw_affiliation_string":"The University of Texas Department of Statistics and Data Sciences, , Austin, TX 78705,","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"partment of Statistics, Texas A&M University , College Station, TX 77843,","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Texas A&M University Department of Statistics, , College Station, TX United States 3143, 77843","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5102626623"],"corresponding_institution_ids":["https://openalex.org/I2801502816","https://openalex.org/I4210142440","https://openalex.org/I91045830"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.767,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.6935808,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"41","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9502999782562256,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.949999988079071,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mendelian-randomization","display_name":"Mendelian randomization","score":0.9432981014251709},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.6834801435470581},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6642277240753174},{"id":"https://openalex.org/keywords/reciprocal","display_name":"Reciprocal","score":0.6045411825180054},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.5074586272239685},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.4973795711994171},{"id":"https://openalex.org/keywords/multivariate-statistics","display_name":"Multivariate statistics","score":0.49448418617248535},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44338810443878174},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.4253648817539215},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4218823313713074},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3312699496746063},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.28369635343551636},{"id":"https://openalex.org/keywords/genetic-variants","display_name":"Genetic variants","score":0.22425097227096558},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19604435563087463},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14268380403518677},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1316656768321991}],"concepts":[{"id":"https://openalex.org/C2779901538","wikidata":"https://www.wikidata.org/wiki/Q6816584","display_name":"Mendelian randomization","level":5,"score":0.9432981014251709},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.6834801435470581},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6642277240753174},{"id":"https://openalex.org/C2777742833","wikidata":"https://www.wikidata.org/wiki/Q1964083","display_name":"Reciprocal","level":2,"score":0.6045411825180054},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.5074586272239685},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.4973795711994171},{"id":"https://openalex.org/C161584116","wikidata":"https://www.wikidata.org/wiki/Q1952580","display_name":"Multivariate statistics","level":2,"score":0.49448418617248535},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44338810443878174},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.4253648817539215},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4218823313713074},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3312699496746063},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.28369635343551636},{"id":"https://openalex.org/C2993967602","wikidata":"https://www.wikidata.org/wiki/Q5532932","display_name":"Genetic variants","level":4,"score":0.22425097227096558},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19604435563087463},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14268380403518677},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1316656768321991},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057182","descriptor_name":"Mendelian Randomization Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057182","descriptor_name":"Mendelian Randomization Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057182","descriptor_name":"Mendelian Randomization Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057182","descriptor_name":"Mendelian Randomization Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaf130","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf130","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf130/62593531/btaf130.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40128153","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40128153","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11992333","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11992333","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaf130","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaf130","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaf130/62593531/btaf130.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.5400000214576721,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G3074428404","display_name":null,"funder_award_id":"DMS-2112943","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G424445274","display_name":null,"funder_award_id":"1R01GM148974-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4408845756.pdf"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1905058580","https://openalex.org/W2113699335","https://openalex.org/W2805983714","https://openalex.org/W2963142812","https://openalex.org/W3118232556","https://openalex.org/W3133859624","https://openalex.org/W3191796027","https://openalex.org/W4399546679","https://openalex.org/W4399575626","https://openalex.org/W4399585520","https://openalex.org/W4399589763","https://openalex.org/W4399638814","https://openalex.org/W4399649206","https://openalex.org/W4399929459"],"related_works":["https://openalex.org/W2901309888","https://openalex.org/W2169283889","https://openalex.org/W4210703904","https://openalex.org/W2052821216","https://openalex.org/W4404875725","https://openalex.org/W2036527494","https://openalex.org/W2610080820","https://openalex.org/W4294125588","https://openalex.org/W2416849719","https://openalex.org/W2789001806"],"abstract_inverted_index":{"MR.RGM":[0],"is":[1],"available":[2],"at":[3],"CRAN":[4],"(https://CRAN.R-project.org/package=MR.RGM,":[5],"DOI:":[6],"10.32614/CRAN.package.MR.RGM)":[7],"and":[8],"https://github.com/bitansa/MR.RGM.":[9]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
