{"id":"https://openalex.org/W4403455884","doi":"https://doi.org/10.1093/bioinformatics/btae610","title":"TRAITER: transformer-guided diagnosis and prognosis of heart failure using cell nuclear morphology and DNA damage marker","display_name":"TRAITER: transformer-guided diagnosis and prognosis of heart failure using cell nuclear morphology and DNA damage marker","publication_year":2024,"publication_date":"2024-10-16","ids":{"openalex":"https://openalex.org/W4403455884","doi":"https://doi.org/10.1093/bioinformatics/btae610","pmid":"https://pubmed.ncbi.nlm.nih.gov/39412446"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae610","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae610","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae610/59809596/btae610.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae610/59809596/btae610.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057465384","display_name":"Hiromu Hayashi","orcid":null},"institutions":[{"id":"https://openalex.org/I207014233","display_name":"Kyushu Institute of Technology","ror":"https://ror.org/02278tr80","country_code":"JP","type":"education","lineage":["https://openalex.org/I207014233"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiromu Hayashi","raw_affiliation_strings":["Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","institution_ids":["https://openalex.org/I207014233"]},{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan","institution_ids":["https://openalex.org/I207014233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089725402","display_name":"Toshiyuki Ko","orcid":"https://orcid.org/0000-0002-9043-064X"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Toshiyuki Ko","raw_affiliation_strings":["Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Therapeutic Strategy for Heart Failure, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Therapeutic Strategy for Heart Failure, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057964846","display_name":"Zhehao Dai","orcid":"https://orcid.org/0000-0002-0363-7563"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Zhehao Dai","raw_affiliation_strings":["Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan"],"raw_orcid":"https://orcid.org/0000-0002-0363-7563","affiliations":[{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081437982","display_name":"Kanna Fujita","orcid":"https://orcid.org/0000-0003-0638-3121"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kanna Fujita","raw_affiliation_strings":["Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Computational Diagnostic Radiology and Preventive Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","Department of Computational Diagnostic Radiology and Preventive Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Computational Diagnostic Radiology and Preventive Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Computational Diagnostic Radiology and Preventive Medicine, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027716929","display_name":"Seitaro Nomura","orcid":"https://orcid.org/0000-0002-2957-2016"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Seitaro Nomura","raw_affiliation_strings":["Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114289496","display_name":"Hiroki Kiyoshima","orcid":null},"institutions":[{"id":"https://openalex.org/I207014233","display_name":"Kyushu Institute of Technology","ror":"https://ror.org/02278tr80","country_code":"JP","type":"education","lineage":["https://openalex.org/I207014233"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroki Kiyoshima","raw_affiliation_strings":["Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","institution_ids":["https://openalex.org/I207014233"]},{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan","institution_ids":["https://openalex.org/I207014233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084127629","display_name":"S. Ishihara","orcid":"https://orcid.org/0000-0002-7364-0194"},"institutions":[{"id":"https://openalex.org/I207014233","display_name":"Kyushu Institute of Technology","ror":"https://ror.org/02278tr80","country_code":"JP","type":"education","lineage":["https://openalex.org/I207014233"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shinya Ishihara","raw_affiliation_strings":["Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","institution_ids":["https://openalex.org/I207014233"]},{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan","institution_ids":["https://openalex.org/I207014233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063865670","display_name":"Momoko Hamano","orcid":"https://orcid.org/0000-0002-8752-7053"},"institutions":[{"id":"https://openalex.org/I207014233","display_name":"Kyushu Institute of Technology","ror":"https://ror.org/02278tr80","country_code":"JP","type":"education","lineage":["https://openalex.org/I207014233"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Momoko Hamano","raw_affiliation_strings":["Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan"],"raw_orcid":"https://orcid.org/0000-0002-8752-7053","affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","institution_ids":["https://openalex.org/I207014233"]},{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan","institution_ids":["https://openalex.org/I207014233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057781163","display_name":"Issei Komuro","orcid":"https://orcid.org/0000-0002-0714-7182"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I79072001","display_name":"International University of Health and Welfare","ror":"https://ror.org/053d3tv41","country_code":"JP","type":"education","lineage":["https://openalex.org/I79072001"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Issei Komuro","raw_affiliation_strings":["Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","International University of Health and Welafare , Minato, Tokyo 107-8402,","International University of Health and Welafare, Minato, Tokyo 107-8402, Japan","Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cardiovascular Medicine, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo , Bunkyo, Tokyo 113-8655,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"International University of Health and Welafare , Minato, Tokyo 107-8402,","institution_ids":["https://openalex.org/I79072001"]},{"raw_affiliation_string":"International University of Health and Welafare, Minato, Tokyo 107-8402, Japan","institution_ids":["https://openalex.org/I79072001"]},{"raw_affiliation_string":"Department of Frontier Cardiovascular Science, Graduate School of Medicine, The University of Tokyo, Bunkyo, Tokyo, 113-8655, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035394108","display_name":"Yoshihiro Yamanishi","orcid":"https://orcid.org/0000-0003-2279-8773"},"institutions":[{"id":"https://openalex.org/I207014233","display_name":"Kyushu Institute of Technology","ror":"https://ror.org/02278tr80","country_code":"JP","type":"education","lineage":["https://openalex.org/I207014233"]},{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Yoshihiro Yamanishi","raw_affiliation_strings":["Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","Department of Complex Systems Science, Graduate School of Informatics, Nagoya University , Chikusa, Nagoya, Aichi 464-8601,","Department of Complex Systems Science, Graduate School of Informatics, Nagoya University, Chikusa, Nagoya, Aichi 464-8602, Japan","Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology , Iizuka 820-8502, Fukuoka,","institution_ids":["https://openalex.org/I207014233"]},{"raw_affiliation_string":"Department of Complex Systems Science, Graduate School of Informatics, Nagoya University , Chikusa, Nagoya, Aichi 464-8601,","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"Department of Complex Systems Science, Graduate School of Informatics, Nagoya University, Chikusa, Nagoya, Aichi 464-8602, Japan","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Faculty of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan","institution_ids":["https://openalex.org/I207014233"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5027716929","https://openalex.org/A5035394108","https://openalex.org/A5057781163","https://openalex.org/A5063865670"],"corresponding_institution_ids":["https://openalex.org/I207014233","https://openalex.org/I60134161","https://openalex.org/I74801974","https://openalex.org/I79072001"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1133137,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"40","issue":"11","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.1965000033378601,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.1965000033378601,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.0689999982714653,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.06520000100135803,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5116510987281799},{"id":"https://openalex.org/keywords/heart-failure","display_name":"Heart failure","score":0.45291683077812195},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4286290109157562},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3835242986679077},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3483463525772095},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.34145835041999817},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.24256449937820435}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5116510987281799},{"id":"https://openalex.org/C2778198053","wikidata":"https://www.wikidata.org/wiki/Q181754","display_name":"Heart failure","level":2,"score":0.45291683077812195},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4286290109157562},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3835242986679077},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3483463525772095},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.34145835041999817},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.24256449937820435}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004249","descriptor_name":"DNA Damage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004249","descriptor_name":"DNA Damage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004249","descriptor_name":"DNA Damage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004249","descriptor_name":"DNA Damage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004249","descriptor_name":"DNA Damage","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006333","descriptor_name":"Heart Failure","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D006333","descriptor_name":"Heart Failure","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D006333","descriptor_name":"Heart Failure","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D006333","descriptor_name":"Heart Failure","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D006333","descriptor_name":"Heart Failure","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btae610","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae610","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae610/59809596/btae610.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39412446","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39412446","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11552630","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11552630","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11552630/pdf/btae610.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae610","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae610","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae610/59809596/btae610.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7900000214576721,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403455884.pdf","grobid_xml":"https://content.openalex.org/works/W4403455884.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1506336777","https://openalex.org/W1962987448","https://openalex.org/W1986779667","https://openalex.org/W2016257722","https://openalex.org/W2059843163","https://openalex.org/W2077280107","https://openalex.org/W2117539524","https://openalex.org/W2123950519","https://openalex.org/W2133059825","https://openalex.org/W2138825607","https://openalex.org/W2154741421","https://openalex.org/W2169710365","https://openalex.org/W2181350280","https://openalex.org/W2314628933","https://openalex.org/W2464496825","https://openalex.org/W2546883271","https://openalex.org/W2592929672","https://openalex.org/W2610602137","https://openalex.org/W2751884637","https://openalex.org/W2913705661","https://openalex.org/W2977002799","https://openalex.org/W2990366895","https://openalex.org/W3181583128","https://openalex.org/W3201153148","https://openalex.org/W3216861964","https://openalex.org/W4211150832","https://openalex.org/W4291793058","https://openalex.org/W4306382132","https://openalex.org/W4360617079","https://openalex.org/W4365504576","https://openalex.org/W4367598041","https://openalex.org/W4388414058"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W4389568370","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W2033914206","https://openalex.org/W2042327336"],"abstract_inverted_index":{"MOTIVATION:":[0],"Heart":[1],"failure":[2],"(HF),":[3],"a":[4,21,46],"major":[5],"cause":[6],"of":[7,28,30,123],"morbidity":[8],"and":[9,14,39,45,60,75,110,127,145],"mortality,":[10],"necessitates":[11],"precise":[12],"diagnostic":[13],"prognostic":[15],"methods.":[16],"RESULTS:":[17],"This":[18],"study":[19],"presents":[20],"novel":[22],"deep":[23],"learning":[24],"approach,":[25],"Transformer-based":[26],"Analysis":[27],"Images":[29],"Tissue":[31],"for":[32,36,63,107,112],"Effective":[33],"Remedy":[34],"(TRAITER),":[35],"HF":[37,51,80,136],"diagnosis":[38],"prognosis.":[40],"Using":[41],"image":[42],"segmentation":[43],"techniques":[44],"Vision":[47],"Transformer,":[48],"TRAITER":[49,89,103,115],"predicts":[50],"likelihood":[52],"from":[53,69,86,100],"cardiac":[54],"tissue":[55],"cell":[56,73],"nuclear":[57],"morphology":[58],"images":[59,71,85,99,109],"the":[61,150],"potential":[62],"left":[64],"ventricular":[65],"reverse":[66],"remodeling":[67],"(LVRR)":[68],"dual-stained":[70],"with":[72,96],"nuclei":[74],"DNA":[76],"damage":[77],"markers.":[78],"In":[79],"prediction":[81,95],"using":[82],"31":[83],"158":[84],"9":[87],"patients,":[88,102],"achieved":[90],"83.1%":[91],"accuracy.":[92],"For":[93],"LVRR":[94],"231":[97],"840":[98],"46":[101],"attained":[104],"84.2%":[105],"accuracy":[106],"individual":[108,113],"92.9%":[111],"patients.":[114],"outperformed":[116],"other":[117],"neural":[118],"network":[119],"models":[120],"in":[121],"terms":[122],"receiver":[124],"operating":[125],"characteristics,":[126],"precision-recall":[128],"curves.":[129],"Our":[130],"method":[131],"promises":[132],"to":[133],"advance":[134],"personalized":[135],"medicine":[137],"decision-making.":[138],"AVAILABILITY":[139],"AND":[140],"IMPLEMENTATION:":[141],"The":[142],"source":[143],"code":[144],"data":[146],"are":[147],"available":[148],"at":[149],"following":[151],"link:":[152],"https://github.com/HamanoLaboratory/predict-of-HF-and-LVRR.":[153]},"counts_by_year":[],"updated_date":"2026-06-17T08:01:34.144755","created_date":"2025-10-10T00:00:00"}
