{"id":"https://openalex.org/W4403299283","doi":"https://doi.org/10.1093/bioinformatics/btae601","title":"MNBC: a multithreaded Minimizer-based Na\u00efve Bayes Classifier for improved metagenomic sequence classification","display_name":"MNBC: a multithreaded Minimizer-based Na\u00efve Bayes Classifier for improved metagenomic sequence classification","publication_year":2024,"publication_date":"2024-10-01","ids":{"openalex":"https://openalex.org/W4403299283","doi":"https://doi.org/10.1093/bioinformatics/btae601","pmid":"https://pubmed.ncbi.nlm.nih.gov/39388213"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae601","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae601","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae601/59713759/btae601.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae601/59713759/btae601.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111166027","display_name":"Ruipeng Lu","orcid":"https://orcid.org/0009-0002-3878-2880"},"institutions":[{"id":"https://openalex.org/I1307613440","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08","country_code":"CA","type":"government","lineage":["https://openalex.org/I1307613440"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Ruipeng Lu","raw_affiliation_strings":["National Centre for Animal Disease, Canadian Food Inspection Agency , Lethbridge County, AB, T1J 5R7,"],"affiliations":[{"raw_affiliation_string":"National Centre for Animal Disease, Canadian Food Inspection Agency , Lethbridge County, AB, T1J 5R7,","institution_ids":["https://openalex.org/I1307613440"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000836398","display_name":"Tim Dumonceaux","orcid":"https://orcid.org/0000-0001-5165-0343"},"institutions":[{"id":"https://openalex.org/I1331897569","display_name":"Agriculture and Agri-Food Canada","ror":"https://ror.org/051dzs374","country_code":"CA","type":"government","lineage":["https://openalex.org/I1331897569","https://openalex.org/I2802286613"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Tim Dumonceaux","raw_affiliation_strings":["Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada , Saskatoon, SK, S7N 0X2,","Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, S7N 0X2, Canada"],"affiliations":[{"raw_affiliation_string":"Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada , Saskatoon, SK, S7N 0X2,","institution_ids":["https://openalex.org/I1331897569"]},{"raw_affiliation_string":"Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, S7N 0X2, Canada","institution_ids":["https://openalex.org/I1331897569"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069332774","display_name":"M. Anzar","orcid":"https://orcid.org/0000-0001-8379-8852"},"institutions":[{"id":"https://openalex.org/I1331897569","display_name":"Agriculture and Agri-Food Canada","ror":"https://ror.org/051dzs374","country_code":"CA","type":"government","lineage":["https://openalex.org/I1331897569","https://openalex.org/I2802286613"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Muhammad Anzar","raw_affiliation_strings":["Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada , Saskatoon, SK, S7N 0X2,","Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, S7N 0X2, Canada"],"affiliations":[{"raw_affiliation_string":"Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada , Saskatoon, SK, S7N 0X2,","institution_ids":["https://openalex.org/I1331897569"]},{"raw_affiliation_string":"Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, S7N 0X2, Canada","institution_ids":["https://openalex.org/I1331897569"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038643122","display_name":"Athanasios Zovoilis","orcid":null},"institutions":[{"id":"https://openalex.org/I46247651","display_name":"University of Manitoba","ror":"https://ror.org/02gfys938","country_code":"CA","type":"education","lineage":["https://openalex.org/I46247651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Athanasios Zovoilis","raw_affiliation_strings":["Department of Biochemistry and Medical Genetics, University of Manitoba , Winnipeg, MB, R3E 0J9,","Department of Biochemistry and Medical Genetics, University of Manitoba, Winnipeg, R3E 0J9, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Medical Genetics, University of Manitoba , Winnipeg, MB, R3E 0J9,","institution_ids":["https://openalex.org/I46247651"]},{"raw_affiliation_string":"Department of Biochemistry and Medical Genetics, University of Manitoba, Winnipeg, R3E 0J9, Canada","institution_ids":["https://openalex.org/I46247651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005830590","display_name":"Kym Antonation","orcid":"https://orcid.org/0009-0006-9264-7312"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Kym Antonation","raw_affiliation_strings":["National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada"],"affiliations":[{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060194750","display_name":"Dillon Barker","orcid":"https://orcid.org/0000-0002-2953-8707"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Dillon Barker","raw_affiliation_strings":["National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada"],"affiliations":[{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023196965","display_name":"Cindi R. Corbett","orcid":"https://orcid.org/0000-0003-4158-1799"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Cindi Corbett","raw_affiliation_strings":["National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada"],"affiliations":[{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112515230","display_name":"C\u00e9line Nadon","orcid":null},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Celine Nadon","raw_affiliation_strings":["National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada"],"affiliations":[{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada , Winnipeg, MB, R3E 3M4,","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"National Microbiology Laboratory at Winnipeg, Public Health Agency of Canada, Winnipeg, R3E 3M4, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037798225","display_name":"James A. Robertson","orcid":"https://orcid.org/0000-0002-8534-5694"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"James Robertson","raw_affiliation_strings":["National Microbiology Laboratory at Guelph, Public Health Agency of Canada , Guelph, ON, N1G 3W4,","National Microbiology Laboratory at Guelph, Public Health Agency of Canada, Guelph, N1G 3W4, Canada"],"affiliations":[{"raw_affiliation_string":"National Microbiology Laboratory at Guelph, Public Health Agency of Canada , Guelph, ON, N1G 3W4,","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"National Microbiology Laboratory at Guelph, Public Health Agency of Canada, Guelph, N1G 3W4, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043580653","display_name":"Shannon H.C. Eagle","orcid":"https://orcid.org/0000-0002-6643-8799"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shannon H C Eagle","raw_affiliation_strings":["National Microbiology Laboratory at Guelph, Public Health Agency of Canada , Guelph, ON, N1G 3W4,","National Microbiology Laboratory at Guelph, Public Health Agency of Canada, Guelph, N1G 3W4, Canada"],"affiliations":[{"raw_affiliation_string":"National Microbiology Laboratory at Guelph, Public Health Agency of Canada , Guelph, ON, N1G 3W4,","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"National Microbiology Laboratory at Guelph, Public Health Agency of Canada, Guelph, N1G 3W4, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027191429","display_name":"Oliver Lung","orcid":"https://orcid.org/0000-0002-0494-1620"},"institutions":[{"id":"https://openalex.org/I1307613440","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08","country_code":"CA","type":"government","lineage":["https://openalex.org/I1307613440"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Oliver Lung","raw_affiliation_strings":["National Centre for Foreign Animal Disease, Canadian Food Inspection Agency , Winnipeg, MB, R3E 3M4,","National Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, R3E 3M4, Canada"],"affiliations":[{"raw_affiliation_string":"National Centre for Foreign Animal Disease, Canadian Food Inspection Agency , Winnipeg, MB, R3E 3M4,","institution_ids":["https://openalex.org/I1307613440"]},{"raw_affiliation_string":"National Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, R3E 3M4, Canada","institution_ids":["https://openalex.org/I1307613440"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023648658","display_name":"Josip Rudar","orcid":"https://orcid.org/0000-0003-0484-8028"},"institutions":[{"id":"https://openalex.org/I1307613440","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08","country_code":"CA","type":"government","lineage":["https://openalex.org/I1307613440"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Josip Rudar","raw_affiliation_strings":["National Centre for Foreign Animal Disease, Canadian Food Inspection Agency , Winnipeg, MB, R3E 3M4,","National Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, R3E 3M4, Canada"],"affiliations":[{"raw_affiliation_string":"National Centre for Foreign Animal Disease, Canadian Food Inspection Agency , Winnipeg, MB, R3E 3M4,","institution_ids":["https://openalex.org/I1307613440"]},{"raw_affiliation_string":"National Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, R3E 3M4, Canada","institution_ids":["https://openalex.org/I1307613440"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011427518","display_name":"Om Surujballi","orcid":null},"institutions":[{"id":"https://openalex.org/I1307613440","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08","country_code":"CA","type":"government","lineage":["https://openalex.org/I1307613440"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Om Surujballi","raw_affiliation_strings":["Ottawa Animal Health Laboratory, Canadian Food Inspection Agency , Ottawa, ON, K2J 4S1,","Ottawa Animal Health Laboratory, Canadian Food Inspection Agency, Ottawa, K2J 4S1, Canada"],"affiliations":[{"raw_affiliation_string":"Ottawa Animal Health Laboratory, Canadian Food Inspection Agency , Ottawa, ON, K2J 4S1,","institution_ids":["https://openalex.org/I1307613440"]},{"raw_affiliation_string":"Ottawa Animal Health Laboratory, Canadian Food Inspection Agency, Ottawa, K2J 4S1, Canada","institution_ids":["https://openalex.org/I1307613440"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057582762","display_name":"Chad Laing","orcid":"https://orcid.org/0000-0003-1162-257X"},"institutions":[{"id":"https://openalex.org/I1307613440","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08","country_code":"CA","type":"government","lineage":["https://openalex.org/I1307613440"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Chad Laing","raw_affiliation_strings":["National Centre for Animal Disease, Canadian Food Inspection Agency , Lethbridge County, AB, T1J 5R7,"],"affiliations":[{"raw_affiliation_string":"National Centre for Animal Disease, Canadian Food Inspection Agency , Lethbridge County, AB, T1J 5R7,","institution_ids":["https://openalex.org/I1307613440"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5111166027"],"corresponding_institution_ids":["https://openalex.org/I1307613440"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.4769,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.65605231,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"40","issue":"10","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9807999730110168,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9807999730110168,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9742000102996826,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9718000292778015,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.7922886610031128},{"id":"https://openalex.org/keywords/naive-bayes-classifier","display_name":"Naive Bayes classifier","score":0.7173916101455688},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.6868972182273865},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6624175906181335},{"id":"https://openalex.org/keywords/bayes-theorem","display_name":"Bayes' theorem","score":0.6047465801239014},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5287919640541077},{"id":"https://openalex.org/keywords/bayes-classifier","display_name":"Bayes classifier","score":0.48669034242630005},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4307779371738434},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.41315847635269165},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.38832101225852966},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32671016454696655},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.23051676154136658},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16744014620780945},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.11759236454963684},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08477064967155457}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.7922886610031128},{"id":"https://openalex.org/C52001869","wikidata":"https://www.wikidata.org/wiki/Q812530","display_name":"Naive Bayes classifier","level":3,"score":0.7173916101455688},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.6868972182273865},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6624175906181335},{"id":"https://openalex.org/C207201462","wikidata":"https://www.wikidata.org/wiki/Q182505","display_name":"Bayes' theorem","level":3,"score":0.6047465801239014},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5287919640541077},{"id":"https://openalex.org/C185207860","wikidata":"https://www.wikidata.org/wiki/Q17004744","display_name":"Bayes classifier","level":4,"score":0.48669034242630005},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4307779371738434},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.41315847635269165},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.38832101225852966},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32671016454696655},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.23051676154136658},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16744014620780945},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.11759236454963684},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08477064967155457},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btae601","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae601","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae601/59713759/btae601.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39388213","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39388213","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11522871","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11522871","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11522871/pdf/btae601.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae601","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae601","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae601/59713759/btae601.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310768","display_name":"University of Lethbridge","ror":"https://ror.org/044j76961"},{"id":"https://openalex.org/F4320311580","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08"},{"id":"https://openalex.org/F4320312568","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37"},{"id":"https://openalex.org/F4320320853","display_name":"Public Health Agency","ror":"https://ror.org/03ek62e72"},{"id":"https://openalex.org/F4320334595","display_name":"Agriculture and Agri-Food Canada","ror":"https://ror.org/051dzs374"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403299283.pdf","grobid_xml":"https://content.openalex.org/works/W4403299283.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W2000589358","https://openalex.org/W2003347102","https://openalex.org/W2049633694","https://openalex.org/W2100947741","https://openalex.org/W2101305949","https://openalex.org/W2103148772","https://openalex.org/W2103441770","https://openalex.org/W2120267228","https://openalex.org/W2144560237","https://openalex.org/W2153990926","https://openalex.org/W2154468535","https://openalex.org/W2159954944","https://openalex.org/W2170551349","https://openalex.org/W2337747100","https://openalex.org/W2753933954","https://openalex.org/W2950150251","https://openalex.org/W2950964375","https://openalex.org/W2951160681","https://openalex.org/W2951594653","https://openalex.org/W2952152744","https://openalex.org/W2958388979","https://openalex.org/W2968450569","https://openalex.org/W2982554596","https://openalex.org/W2990618091","https://openalex.org/W3004511899","https://openalex.org/W3008594856","https://openalex.org/W3038374326","https://openalex.org/W3043424179","https://openalex.org/W3087226231","https://openalex.org/W3190196859","https://openalex.org/W4225258284","https://openalex.org/W4239510810","https://openalex.org/W4321611856","https://openalex.org/W4385975493","https://openalex.org/W6683124362","https://openalex.org/W6910335636"],"related_works":["https://openalex.org/W2374047926","https://openalex.org/W2057359786","https://openalex.org/W2394466068","https://openalex.org/W2381401419","https://openalex.org/W2383501440","https://openalex.org/W2417174640","https://openalex.org/W4312866165","https://openalex.org/W2957157835","https://openalex.org/W145653800","https://openalex.org/W2034570513"],"abstract_inverted_index":{"MNBC":[0],"is":[1],"freely":[2],"available":[3],"at:":[4],"https://github.com/ComputationalPathogens/MNBC.":[5]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
