{"id":"https://openalex.org/W4402984101","doi":"https://doi.org/10.1093/bioinformatics/btae583","title":"Towards the accurate modelling of antibody\u2212antigen complexes from sequence using machine learning and information-driven docking","display_name":"Towards the accurate modelling of antibody\u2212antigen complexes from sequence using machine learning and information-driven docking","publication_year":2024,"publication_date":"2024-09-27","ids":{"openalex":"https://openalex.org/W4402984101","doi":"https://doi.org/10.1093/bioinformatics/btae583","pmid":"https://pubmed.ncbi.nlm.nih.gov/39348157"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae583","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae583","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btae583","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046328622","display_name":"Marco Giulini","orcid":"https://orcid.org/0000-0002-2691-712X"},"institutions":[{"id":"https://openalex.org/I173063890","display_name":"University of Applied Sciences Utrecht","ror":"https://ror.org/028z9kw20","country_code":"NL","type":"education","lineage":["https://openalex.org/I173063890"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Marco Giulini","raw_affiliation_strings":["Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht CH 3584,","Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht, CH 3584, The"],"affiliations":[{"raw_affiliation_string":"Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht CH 3584,","institution_ids":["https://openalex.org/I173063890","https://openalex.org/I193662353"]},{"raw_affiliation_string":"Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht, CH 3584, The","institution_ids":["https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091100763","display_name":"Constantin Schneider","orcid":"https://orcid.org/0000-0002-2579-0307"},"institutions":[{"id":"https://openalex.org/I4210098270","display_name":"BioScientia (Poland)","ror":"https://ror.org/00vtf4k85","country_code":"PL","type":"company","lineage":["https://openalex.org/I4210098270"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Constantin Schneider","raw_affiliation_strings":["Exscientia Plc , Oxford OX4 4GE,","Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,"],"affiliations":[{"raw_affiliation_string":"Exscientia Plc , Oxford OX4 4GE,","institution_ids":["https://openalex.org/I4210098270"]},{"raw_affiliation_string":"Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011179877","display_name":"Daniel Cutting","orcid":"https://orcid.org/0000-0002-7395-7802"},"institutions":[{"id":"https://openalex.org/I4210098270","display_name":"BioScientia (Poland)","ror":"https://ror.org/00vtf4k85","country_code":"PL","type":"company","lineage":["https://openalex.org/I4210098270"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Daniel Cutting","raw_affiliation_strings":["Exscientia Plc , Oxford OX4 4GE,","Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,"],"affiliations":[{"raw_affiliation_string":"Exscientia Plc , Oxford OX4 4GE,","institution_ids":["https://openalex.org/I4210098270"]},{"raw_affiliation_string":"Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112880708","display_name":"Nikita Desai","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098270","display_name":"BioScientia (Poland)","ror":"https://ror.org/00vtf4k85","country_code":"PL","type":"company","lineage":["https://openalex.org/I4210098270"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Nikita Desai","raw_affiliation_strings":["Exscientia Plc , Oxford OX4 4GE,","Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,"],"affiliations":[{"raw_affiliation_string":"Exscientia Plc , Oxford OX4 4GE,","institution_ids":["https://openalex.org/I4210098270"]},{"raw_affiliation_string":"Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015572211","display_name":"Charlotte M. Deane","orcid":"https://orcid.org/0000-0003-1388-2252"},"institutions":[{"id":"https://openalex.org/I4210098270","display_name":"BioScientia (Poland)","ror":"https://ror.org/00vtf4k85","country_code":"PL","type":"company","lineage":["https://openalex.org/I4210098270"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Charlotte M Deane","raw_affiliation_strings":["Exscientia Plc , Oxford OX4 4GE,","Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,"],"affiliations":[{"raw_affiliation_string":"Exscientia Plc , Oxford OX4 4GE,","institution_ids":["https://openalex.org/I4210098270"]},{"raw_affiliation_string":"Exscientia plc , The Schroedinger Building, Oxford, OX4 4GE,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064072429","display_name":"Alexandre M. J. J. Bonvin","orcid":"https://orcid.org/0000-0001-7369-1322"},"institutions":[{"id":"https://openalex.org/I173063890","display_name":"University of Applied Sciences Utrecht","ror":"https://ror.org/028z9kw20","country_code":"NL","type":"education","lineage":["https://openalex.org/I173063890"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Alexandre M J J Bonvin","raw_affiliation_strings":["Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht CH 3584,","Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht, CH 3584, The"],"affiliations":[{"raw_affiliation_string":"Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht CH 3584,","institution_ids":["https://openalex.org/I173063890","https://openalex.org/I193662353"]},{"raw_affiliation_string":"Bijvoet Centre for Biomolecular Research, Faculty of Science\u2014Chemistry, Utrecht University , Utrecht, CH 3584, The","institution_ids":["https://openalex.org/I193662353"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5046328622"],"corresponding_institution_ids":["https://openalex.org/I173063890","https://openalex.org/I193662353"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":9.8832,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.98678503,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"40","issue":"10","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11124","display_name":"Protein purification and stability","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7781554460525513},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7744856476783752},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.6802661418914795},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.6163914203643799},{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.4513687789440155},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.45016297698020935},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.4101405739784241},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.39482492208480835},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.39000362157821655},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3878026306629181},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.35990840196609497},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34259623289108276},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2115299105644226},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1437399983406067},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11631730198860168}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7781554460525513},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7744856476783752},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.6802661418914795},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.6163914203643799},{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.4513687789440155},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.45016297698020935},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.4101405739784241},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39482492208480835},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.39000362157821655},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3878026306629181},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35990840196609497},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34259623289108276},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2115299105644226},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1437399983406067},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11631730198860168},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000941","descriptor_name":"Antigens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btae583","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae583","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39348157","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39348157","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11483107","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11483107","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11483107/pdf/btae583.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae583","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae583","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.46000000834465027,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G3471917844","display_name":null,"funder_award_id":"823830","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5588463944","display_name":null,"funder_award_id":"101017567","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6630833806","display_name":null,"funder_award_id":"101093290","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1030883578","https://openalex.org/W1985481261","https://openalex.org/W2041189078","https://openalex.org/W2048643046","https://openalex.org/W2088510308","https://openalex.org/W2105438341","https://openalex.org/W2110968143","https://openalex.org/W2133712572","https://openalex.org/W2137167381","https://openalex.org/W2153983456","https://openalex.org/W2292767755","https://openalex.org/W2508425869","https://openalex.org/W2583289470","https://openalex.org/W2949223833","https://openalex.org/W2983012520","https://openalex.org/W3128824229","https://openalex.org/W3165831593","https://openalex.org/W3177828909","https://openalex.org/W3183475563","https://openalex.org/W3186179742","https://openalex.org/W3195593976","https://openalex.org/W3197596721","https://openalex.org/W3207204660","https://openalex.org/W4210520848","https://openalex.org/W4210997669","https://openalex.org/W4225321559","https://openalex.org/W4229892776","https://openalex.org/W4317679756","https://openalex.org/W4327550249","https://openalex.org/W4365505983","https://openalex.org/W4378714914","https://openalex.org/W4385798891","https://openalex.org/W4388034457","https://openalex.org/W4389568864","https://openalex.org/W4390661248","https://openalex.org/W6675354045","https://openalex.org/W6802033083","https://openalex.org/W6839758910","https://openalex.org/W6842739755"],"related_works":["https://openalex.org/W2021824670","https://openalex.org/W2009867644","https://openalex.org/W2363997565","https://openalex.org/W2113128227","https://openalex.org/W632256878","https://openalex.org/W2491403535","https://openalex.org/W2479811461","https://openalex.org/W2104915799","https://openalex.org/W4311938462","https://openalex.org/W2355429491"],"abstract_inverted_index":{"The":[0,10,22],"source":[1],"code":[2,11],"of":[3,31],"HADDOCK3":[4],"is":[5,18],"freely":[6],"available":[7,19],"at":[8,20,42],"github.com/haddocking/haddock3.":[9],"to":[12],"generate":[13],"and":[14],"analyse":[15],"the":[16,43],"data":[17,45],"github.com/haddocking/ai-antibodies.":[21],"full":[23],"runs,":[24],"including":[25],"docking":[26],"models":[27],"from":[28],"all":[29],"modules":[30],"a":[32],"workflow":[33],"have":[34],"been":[35],"deposited":[36],"in":[37],"our":[38],"lab":[39],"collection":[40],"(data.sbgrid.org/labs/32/1139)":[41],"SBGRID":[44],"repository.":[46]},"counts_by_year":[{"year":2025,"cited_by_count":16},{"year":2024,"cited_by_count":9}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
