{"id":"https://openalex.org/W4401797816","doi":"https://doi.org/10.1093/bioinformatics/btae522","title":"MetDecode: methylation-based deconvolution of cell-free DNA for noninvasive multi-cancer typing","display_name":"MetDecode: methylation-based deconvolution of cell-free DNA for noninvasive multi-cancer typing","publication_year":2024,"publication_date":"2024-08-22","ids":{"openalex":"https://openalex.org/W4401797816","doi":"https://doi.org/10.1093/bioinformatics/btae522","pmid":"https://pubmed.ncbi.nlm.nih.gov/39177091"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae522","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae522","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae522/58902374/btae522.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae522/58902374/btae522.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025306981","display_name":"Antoine Passemiers","orcid":"https://orcid.org/0000-0002-9492-7311"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Antoine Passemiers","raw_affiliation_strings":["Dynamical Systems, Signal Processing and Data Analytics (STADIUS), Department of Electrical Engineering, KU Leuven , Leuven, 3001, Belgium","Signal Processing and Data Analytics (STADIUS), KU Leuven Dynamical Systems, , Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-9492-7311","affiliations":[{"raw_affiliation_string":"Dynamical Systems, Signal Processing and Data Analytics (STADIUS), Department of Electrical Engineering, KU Leuven , Leuven, 3001, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Signal Processing and Data Analytics (STADIUS), KU Leuven Dynamical Systems, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028076440","display_name":"Stefania Tuveri","orcid":"https://orcid.org/0000-0003-4051-4295"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Stefania Tuveri","raw_affiliation_strings":["Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0003-4051-4295","affiliations":[{"raw_affiliation_string":"Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040392416","display_name":"Dhanya Sudhakaran","orcid":null},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Dhanya Sudhakaran","raw_affiliation_strings":["Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058694519","display_name":"Tatjana Jatsenko","orcid":"https://orcid.org/0000-0002-7423-0963"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Tatjana Jatsenko","raw_affiliation_strings":["Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070452913","display_name":"Tina Laga","orcid":"https://orcid.org/0000-0002-7001-9394"},"institutions":[{"id":"https://openalex.org/I4210091886","display_name":"The European Academy of Gynaecological Surgery","ror":"https://ror.org/00cfkaw62","country_code":"BE","type":"nonprofit","lineage":["https://openalex.org/I4210091886"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Tina Laga","raw_affiliation_strings":["Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium","KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]},{"raw_affiliation_string":"Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024524838","display_name":"Kevin Punie","orcid":"https://orcid.org/0000-0002-1162-7963"},"institutions":[{"id":"https://openalex.org/I4210093878","display_name":"GZA Ziekenhuizen Campus Sint-Augustinus","ror":"https://ror.org/00kss4e25","country_code":"BE","type":"healthcare","lineage":["https://openalex.org/I4210093878"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Kevin Punie","raw_affiliation_strings":["Department of Oncology, GZA Ziekenhuis , Antwerp, 2610, Belgium","Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven , Leuven, 3000, Belgium","Multidisciplinary Breast Centre, University Hospitals Leuven , Leuven, 3000, Belgium","KU Leuven Laboratory of Experimental Oncology, Department of General Medical Oncology, , , Leuven, Belgium","Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven, Leuven, Belgium","GZA Ziekenhuis Department of Oncology, , Antwerp, Belgium","University Hospitals Leuven Multidisciplinary Breast Centre, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Oncology, GZA Ziekenhuis , Antwerp, 2610, Belgium","institution_ids":["https://openalex.org/I4210093878"]},{"raw_affiliation_string":"Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Multidisciplinary Breast Centre, University Hospitals Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Laboratory of Experimental Oncology, Department of General Medical Oncology, , , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"GZA Ziekenhuis Department of Oncology, , Antwerp, Belgium","institution_ids":["https://openalex.org/I4210093878"]},{"raw_affiliation_string":"University Hospitals Leuven Multidisciplinary Breast Centre, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088923965","display_name":"Sigrid Hatse","orcid":"https://orcid.org/0000-0002-6764-2628"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Sigrid Hatse","raw_affiliation_strings":["Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven , Leuven, 3000, Belgium","Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven, Leuven, Belgium","KU Leuven Laboratory of Experimental Oncology, Department of General Medical Oncology, , , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Laboratory of Experimental Oncology, Department of General Medical Oncology, University Hospitals Leuven, KU Leuven, Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Laboratory of Experimental Oncology, Department of General Medical Oncology, , , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027182289","display_name":"Sabine Tejpar","orcid":"https://orcid.org/0000-0003-3281-8643"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sabine Tejpar","raw_affiliation_strings":["Digestive Oncology Unit, University Hospital Gasthuisberg , Leuven, 3000, Belgium","University Hospital Gasthuisberg Digestive Oncology Unit, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digestive Oncology Unit, University Hospital Gasthuisberg , Leuven, 3000, Belgium","institution_ids":[]},{"raw_affiliation_string":"University Hospital Gasthuisberg Digestive Oncology Unit, , Leuven, Belgium","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069441719","display_name":"An Coosemans","orcid":"https://orcid.org/0000-0002-7321-4339"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"An Coosemans","raw_affiliation_strings":["Laboratory of Tumour Immunology and Immunotherapy, Department of Oncology, Leuven Cancer Institute, KU Leuven , Leuven, 3000, Belgium","Leuven Cancer Institute, KU Leuven Laboratory of Tumour Immunology and Immunotherapy, Department of Oncology, , Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-7321-4339","affiliations":[{"raw_affiliation_string":"Laboratory of Tumour Immunology and Immunotherapy, Department of Oncology, Leuven Cancer Institute, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Leuven Cancer Institute, KU Leuven Laboratory of Tumour Immunology and Immunotherapy, Department of Oncology, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084817538","display_name":"Els Van Nieuwenhuysen","orcid":"https://orcid.org/0000-0001-5432-1828"},"institutions":[{"id":"https://openalex.org/I4210091886","display_name":"The European Academy of Gynaecological Surgery","ror":"https://ror.org/00cfkaw62","country_code":"BE","type":"nonprofit","lineage":["https://openalex.org/I4210091886"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Els Van Nieuwenhuysen","raw_affiliation_strings":["Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium","KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]},{"raw_affiliation_string":"Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002144411","display_name":"D. Timmerman","orcid":"https://orcid.org/0000-0002-3707-6645"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Dirk Timmerman","raw_affiliation_strings":["Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065916841","display_name":"Giuseppe Floris","orcid":"https://orcid.org/0000-0003-2391-5425"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Giuseppe Floris","raw_affiliation_strings":["Translational Cell & Tissue Research, Department of Pathology, KU Leuven , Leuven, 3000, Belgium","KU Leuven Translational Cell & Tissue Research, Department of Pathology, , Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0003-2391-5425","affiliations":[{"raw_affiliation_string":"Translational Cell & Tissue Research, Department of Pathology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Translational Cell & Tissue Research, Department of Pathology, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007536548","display_name":"Anne\u2010Sophie Van Rompuy","orcid":"https://orcid.org/0000-0002-0138-4486"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Anne-Sophie Van Rompuy","raw_affiliation_strings":["Translational Cell & Tissue Research, Department of Pathology, KU Leuven , Leuven, 3000, Belgium","KU Leuven Translational Cell & Tissue Research, Department of Pathology, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Cell & Tissue Research, Department of Pathology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Translational Cell & Tissue Research, Department of Pathology, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004036479","display_name":"Xavier Sagaert","orcid":"https://orcid.org/0000-0003-3532-9984"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Xavier Sagaert","raw_affiliation_strings":["Translational Cell & Tissue Research, Department of Pathology, KU Leuven , Leuven, 3000, Belgium","KU Leuven Translational Cell & Tissue Research, Department of Pathology, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Translational Cell & Tissue Research, Department of Pathology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Translational Cell & Tissue Research, Department of Pathology, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010913750","display_name":"A. C. Testa","orcid":"https://orcid.org/0000-0003-2217-8726"},"institutions":[{"id":"https://openalex.org/I2802557943","display_name":"Agostino Gemelli University Polyclinic","ror":"https://ror.org/00rg70c39","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I2802557943"]},{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Antonia Testa","raw_affiliation_strings":["Department of Woman, Child and Public Health, Fondazione Policlinico Universitario Agostino Gemelli, IRCCS , Rome, 00168, Italy","Department of Woman, Child and Public Health, Fondazione Policlinico Universitario Agostino Gemelli, IRCCS, Rome, Italy","IRCCS Department of Woman, Child and Public Health, , , Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Woman, Child and Public Health, Fondazione Policlinico Universitario Agostino Gemelli, IRCCS , Rome, 00168, Italy","institution_ids":["https://openalex.org/I2802557943"]},{"raw_affiliation_string":"Department of Woman, Child and Public Health, Fondazione Policlinico Universitario Agostino Gemelli, IRCCS, Rome, Italy","institution_ids":["https://openalex.org/I2802557943"]},{"raw_affiliation_string":"IRCCS Department of Woman, Child and Public Health, , , Rome, Italy","institution_ids":["https://openalex.org/I4210153126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070685397","display_name":"Daniela Ficherova","orcid":null},"institutions":[{"id":"https://openalex.org/I21250087","display_name":"Charles University","ror":"https://ror.org/024d6js02","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21250087"]},{"id":"https://openalex.org/I4210162037","display_name":"General University Hospital in Prague","ror":"https://ror.org/04yg23125","country_code":"CZ","type":"funder","lineage":["https://openalex.org/I4210162037"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Daniela Ficherova","raw_affiliation_strings":["Obstetrics and Gynaecology, First Faculty of Medicine, Charles University and General University Hospital in Prague , Prague, Czech Republic","Charles University and General University Hospital Obstetrics and Gynaecology, First Faculty of Medicine, , in Prague, Prague, Czech Republic"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Obstetrics and Gynaecology, First Faculty of Medicine, Charles University and General University Hospital in Prague , Prague, Czech Republic","institution_ids":["https://openalex.org/I21250087","https://openalex.org/I4210162037"]},{"raw_affiliation_string":"Charles University and General University Hospital Obstetrics and Gynaecology, First Faculty of Medicine, , in Prague, Prague, Czech Republic","institution_ids":["https://openalex.org/I21250087"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020836177","display_name":"Daniele Raimondi","orcid":"https://orcid.org/0000-0003-1157-1899"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Daniele Raimondi","raw_affiliation_strings":["Dynamical Systems, Signal Processing and Data Analytics (STADIUS), Department of Electrical Engineering, KU Leuven , Leuven, 3001, Belgium","Signal Processing and Data Analytics (STADIUS), KU Leuven Dynamical Systems, , Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0003-1157-1899","affiliations":[{"raw_affiliation_string":"Dynamical Systems, Signal Processing and Data Analytics (STADIUS), Department of Electrical Engineering, KU Leuven , Leuven, 3001, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Signal Processing and Data Analytics (STADIUS), KU Leuven Dynamical Systems, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023783658","display_name":"Fr\u00e9d\u00e9ric Amant","orcid":"https://orcid.org/0000-0002-5452-4905"},"institutions":[{"id":"https://openalex.org/I2898336195","display_name":"The Netherlands Cancer Institute","ror":"https://ror.org/03xqtf034","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I2898336195"]},{"id":"https://openalex.org/I4210091886","display_name":"The European Academy of Gynaecological Surgery","ror":"https://ror.org/00cfkaw62","country_code":"BE","type":"nonprofit","lineage":["https://openalex.org/I4210091886"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE","NL"],"is_corresponding":false,"raw_author_name":"Frederic Amant","raw_affiliation_strings":["Department of Gynaecologic Oncology, Netherlands Cancer Institute , Amsterdam, 1066 CX, The Netherlands","Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","Netherlands Cancer Institute Gynaecologic Oncology, , Amsterdam, the Netherlands","KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium","University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gynaecologic Oncology, Netherlands Cancer Institute , Amsterdam, 1066 CX, The Netherlands","institution_ids":["https://openalex.org/I2898336195"]},{"raw_affiliation_string":"Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]},{"raw_affiliation_string":"Gynaecology and Obstetrics, University Hospitals KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Netherlands Cancer Institute Gynaecologic Oncology, , Amsterdam, the Netherlands","institution_ids":["https://openalex.org/I2898336195"]},{"raw_affiliation_string":"KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]},{"raw_affiliation_string":"University Hospitals KU Leuven Gynaecology and Obstetrics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076177437","display_name":"Liesbeth Lenaerts","orcid":"https://orcid.org/0000-0003-3565-2319"},"institutions":[{"id":"https://openalex.org/I4210091886","display_name":"The European Academy of Gynaecological Surgery","ror":"https://ror.org/00cfkaw62","country_code":"BE","type":"nonprofit","lineage":["https://openalex.org/I4210091886"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Liesbeth Lenaerts","raw_affiliation_strings":["Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gynaecological Oncology, Department of Oncology, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Gynaecological Oncology, Department of Oncology, , Leuven, Belgium","institution_ids":["https://openalex.org/I4210091886","https://openalex.org/I99464096"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041984163","display_name":"Yves Moreau","orcid":"https://orcid.org/0000-0002-4647-6560"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Yves Moreau","raw_affiliation_strings":["Dynamical Systems, Signal Processing and Data Analytics (STADIUS), Department of Electrical Engineering, KU Leuven , Leuven, 3001, Belgium","Signal Processing and Data Analytics (STADIUS), KU Leuven Dynamical Systems, , Leuven, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-4647-6560","affiliations":[{"raw_affiliation_string":"Dynamical Systems, Signal Processing and Data Analytics (STADIUS), Department of Electrical Engineering, KU Leuven , Leuven, 3001, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Signal Processing and Data Analytics (STADIUS), KU Leuven Dynamical Systems, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074427420","display_name":"Joris Vermeesch","orcid":"https://orcid.org/0000-0002-3071-1191"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Joris R Vermeesch","raw_affiliation_strings":["Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, KU Leuven , Leuven, 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"KU Leuven Laboratory for Cytogenetics and Genome Research, Department of Human Genetics, , Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5074427420"],"corresponding_institution_ids":["https://openalex.org/I99464096"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.6698,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.84901029,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"40","issue":"9","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9732999801635742,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9732999801635742,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.010400000028312206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.0017999999690800905,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/deconvolution","display_name":"Deconvolution","score":0.7763521671295166},{"id":"https://openalex.org/keywords/typing","display_name":"Typing","score":0.6597880125045776},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.5930736064910889},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5111623406410217},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.49775245785713196},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.48132598400115967},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46192094683647156},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.34148234128952026},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2554325461387634},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.19912588596343994},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15467926859855652}],"concepts":[{"id":"https://openalex.org/C174576160","wikidata":"https://www.wikidata.org/wiki/Q1183700","display_name":"Deconvolution","level":2,"score":0.7763521671295166},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.6597880125045776},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.5930736064910889},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5111623406410217},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.49775245785713196},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.48132598400115967},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46192094683647156},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34148234128952026},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2554325461387634},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.19912588596343994},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15467926859855652},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btae522","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae522","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae522/58902374/btae522.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39177091","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39177091","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:lirias2repo.kuleuven.be:20.500.12942/748159","is_oa":true,"landing_page_url":"https://lirias.kuleuven.be/handle/20.500.12942/748159","pdf_url":"https://lirias.kuleuven.be/retrieve/0c2ed015-d801-49e8-a7af-eac5271c6382","source":{"id":"https://openalex.org/S7407055369","display_name":"Lirias","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, vol. 40 (9), Art.No. ARTN btae522","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11379469","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11379469","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11379469/pdf/btae522.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae522","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae522","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae522/58902374/btae522.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.699999988079071}],"awards":[{"id":"https://openalex.org/G324259913","display_name":null,"funder_award_id":"C14/18/092","funder_id":"https://openalex.org/F4320322308","funder_display_name":"KU Leuven"},{"id":"https://openalex.org/G370153278","display_name":"European Advanced infraStructure for Innovative Genomics","funder_award_id":"824110","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4527036310","display_name":null,"funder_award_id":"C14/22/125","funder_id":"https://openalex.org/F4320322308","funder_display_name":"KU Leuven"},{"id":"https://openalex.org/G5247425628","display_name":null,"funder_award_id":"2016/10728/2603","funder_id":"https://openalex.org/F4320327317","funder_display_name":"Kom op tegen Kanker"}],"funders":[{"id":"https://openalex.org/F4320313460","display_name":"Agentschap Innoveren en Ondernemen","ror":"https://ror.org/032xdry56"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320322308","display_name":"KU Leuven","ror":"https://ror.org/05f950310"},{"id":"https://openalex.org/F4320327317","display_name":"Kom op tegen Kanker","ror":null},{"id":"https://openalex.org/F4320327336","display_name":"Vlaamse regering","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4401797816.pdf","grobid_xml":"https://content.openalex.org/works/W4401797816.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W1598174266","https://openalex.org/W1680591717","https://openalex.org/W1729812787","https://openalex.org/W1963853602","https://openalex.org/W2096837288","https://openalex.org/W2103081012","https://openalex.org/W2129355295","https://openalex.org/W2239118478","https://openalex.org/W2298824325","https://openalex.org/W2549343567","https://openalex.org/W2600929284","https://openalex.org/W2602657459","https://openalex.org/W2608738563","https://openalex.org/W2733100528","https://openalex.org/W2756471067","https://openalex.org/W2765435739","https://openalex.org/W2792366526","https://openalex.org/W2796656633","https://openalex.org/W2801278237","https://openalex.org/W2808051495","https://openalex.org/W2886223143","https://openalex.org/W2899217787","https://openalex.org/W2952214509","https://openalex.org/W2970949033","https://openalex.org/W2979074198","https://openalex.org/W2999524222","https://openalex.org/W3004647847","https://openalex.org/W3035802026","https://openalex.org/W3037732475","https://openalex.org/W3046260387","https://openalex.org/W3132532360","https://openalex.org/W3134869800","https://openalex.org/W3140847467","https://openalex.org/W3161851995","https://openalex.org/W3169544586","https://openalex.org/W3174748501","https://openalex.org/W3186477904","https://openalex.org/W3197442769","https://openalex.org/W3212011634","https://openalex.org/W3215647234","https://openalex.org/W4221030128","https://openalex.org/W4226194996","https://openalex.org/W4226220146","https://openalex.org/W4229007096","https://openalex.org/W4313544615","https://openalex.org/W4379113376","https://openalex.org/W4388141911","https://openalex.org/W4392683901","https://openalex.org/W4394002004","https://openalex.org/W4396965835","https://openalex.org/W6767059536","https://openalex.org/W6792365441","https://openalex.org/W6810961140","https://openalex.org/W6863679049"],"related_works":["https://openalex.org/W3090782779","https://openalex.org/W2902329290","https://openalex.org/W2139872319","https://openalex.org/W2052355316","https://openalex.org/W2046964473","https://openalex.org/W2107880877","https://openalex.org/W2151182744","https://openalex.org/W2024490794","https://openalex.org/W2054863651","https://openalex.org/W1998349112"],"abstract_inverted_index":{"MOTIVATION:":[0],"Circulating-cell":[1],"free":[2],"DNA":[3,48],"(cfDNA)":[4],"is":[5,200],"widely":[6],"explored":[7],"as":[8],"a":[9,47,61,123],"noninvasive":[10],"biomarker":[11],"for":[12,54,73,107],"cancer":[13,36,55,159],"screening":[14],"and":[15,38,42,67,77,80,143],"diagnosis.":[16],"The":[17],"ability":[18],"to":[19,114,128],"decode":[20],"the":[21,85,89,97,108,163,177,184],"cells":[22],"of":[23,110,118,125,130,168,186],"origin":[24,57],"in":[25,35,88,134,147,166,176],"cfDNA":[26,99,156,178],"would":[27],"provide":[28],"biological":[29],"insights":[30],"into":[31],"pathophysiological":[32],"mechanisms,":[33],"aiding":[34],"characterization":[37],"directing":[39],"clinical":[40],"management":[41],"follow-up.":[43],"RESULTS:":[44],"We":[45,59],"developed":[46],"methylation":[49,70,92,100],"signature-based":[50],"deconvolution":[51],"algorithm,":[52],"MetDecode,":[53],"tissue":[56,132],"identification.":[58],"built":[60],"reference":[62,194],"atlas":[63,90],"exploiting":[64],"de":[65],"novo":[66],"published":[68],"whole-genome":[69],"sequencing":[71],"data":[72],"colorectal,":[74],"breast,":[75],"ovarian,":[76],"cervical":[78],"cancer,":[79],"blood-cell-derived":[81],"entities.":[82],"MetDecode":[83,136,161,172,199],"models":[84],"contributors":[86],"absent":[87],"with":[91,191],"patterns":[93],"learnt":[94],"on-the-fly":[95],"from":[96,158],"input":[98],"profiles.":[101],"In":[102,154,170],"addition,":[103],"our":[104],"model":[105],"accounts":[106],"coverage":[109],"each":[111],"marker":[112],"region":[113],"alleviate":[115],"potential":[116],"sources":[117],"noise.":[119],"In-silico":[120],"experiments":[121],"showed":[122],"limit":[124],"detection":[126],"down":[127],"2.88%":[129],"tumor":[131],"contribution":[133,185],"cfDNA.":[135],"produced":[137],"Pearson":[138],"correlation":[139],"coefficients":[140],"above":[141],"0.95":[142],"outperformed":[144],"other":[145],"methods":[146],"simulations":[148],"(P":[149],"<":[150],"0.001;":[151],"T-test;":[152],"one-sided).":[153],"plasma":[155],"profiles":[157],"patients,":[160],"assigned":[162],"correct":[164],"tissue-of-origin":[165],"84.2%":[167],"cases.":[169],"conclusion,":[171],"can":[173],"unravel":[174],"alterations":[175],"pool":[179],"components":[180],"by":[181],"accurately":[182],"estimating":[183],"multiple":[187],"tissues,":[188],"while":[189],"supplied":[190],"an":[192],"imperfect":[193],"atlas.":[195],"AVAILABILITY":[196],"AND":[197],"IMPLEMENTATION:":[198],"available":[201],"at":[202],"https://github.com/JorisVermeeschLab/MetDecode.":[203]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":1}],"updated_date":"2026-07-20T07:56:41.581041","created_date":"2025-10-10T00:00:00"}
