{"id":"https://openalex.org/W4401157975","doi":"https://doi.org/10.1093/bioinformatics/btae480","title":"ClusterMatch aligns single-cell RNA-sequencing data at the multi-scale cluster level via stable matching","display_name":"ClusterMatch aligns single-cell RNA-sequencing data at the multi-scale cluster level via stable matching","publication_year":2024,"publication_date":"2024-07-28","ids":{"openalex":"https://openalex.org/W4401157975","doi":"https://doi.org/10.1093/bioinformatics/btae480","pmid":"https://pubmed.ncbi.nlm.nih.gov/39073888"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae480","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae480","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bioinformatics/btae480","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114172472","display_name":"Teer Ba","orcid":null},"institutions":[{"id":"https://openalex.org/I2722730","display_name":"Inner Mongolia University","ror":"https://ror.org/0106qb496","country_code":"CN","type":"education","lineage":["https://openalex.org/I2722730"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Teer Ba","raw_affiliation_strings":["School of Mathematical Sciences, Inner Mongolia University , Hohhot 010021,","School of Physical Science and Technology, Inner Mongolia University , Hohhot 010021,","School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","School of Mathematical Sciences, Inner Mongolia University, Hohhot, 010021, China"],"affiliations":[{"raw_affiliation_string":"School of Mathematical Sciences, Inner Mongolia University , Hohhot 010021,","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"School of Physical Science and Technology, Inner Mongolia University , Hohhot 010021,","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"School of Mathematical Sciences, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100743269","display_name":"Miao Hao","orcid":"https://orcid.org/0000-0002-8386-2145"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210095018","display_name":"National Center for Mathematics and Interdisciplinary Sciences","ror":"https://ror.org/00s97k668","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210095018"]},{"id":"https://openalex.org/I4210120485","display_name":"Academy of Mathematics and Systems Science","ror":"https://ror.org/02jkmyk67","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120485"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Miao","raw_affiliation_strings":["CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences , Beijing 100190,","School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences , Beijing 100049,","School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, 100049, China","CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China"],"affiliations":[{"raw_affiliation_string":"CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences , Beijing 100190,","institution_ids":["https://openalex.org/I4210120485"]},{"raw_affiliation_string":"School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences , Beijing 100049,","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, 100049, China","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China","institution_ids":["https://openalex.org/I4210120485","https://openalex.org/I4210095018","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114734351","display_name":"Lirong Zhang","orcid":"https://orcid.org/0000-0001-5366-4837"},"institutions":[{"id":"https://openalex.org/I2722730","display_name":"Inner Mongolia University","ror":"https://ror.org/0106qb496","country_code":"CN","type":"education","lineage":["https://openalex.org/I2722730"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lirong Zhang","raw_affiliation_strings":["School of Physical Science and Technology, Inner Mongolia University , Hohhot 010021,","School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China"],"affiliations":[{"raw_affiliation_string":"School of Physical Science and Technology, Inner Mongolia University , Hohhot 010021,","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"School of Physical Science and Technology, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077799932","display_name":"Caixia Gao","orcid":"https://orcid.org/0000-0003-3169-8248"},"institutions":[{"id":"https://openalex.org/I2722730","display_name":"Inner Mongolia University","ror":"https://ror.org/0106qb496","country_code":"CN","type":"education","lineage":["https://openalex.org/I2722730"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Caixia Gao","raw_affiliation_strings":["School of Mathematical Sciences, Inner Mongolia University , Hohhot 010021,","School of Mathematical Sciences, Inner Mongolia University, Hohhot, 010021, China"],"affiliations":[{"raw_affiliation_string":"School of Mathematical Sciences, Inner Mongolia University , Hohhot 010021,","institution_ids":["https://openalex.org/I2722730"]},{"raw_affiliation_string":"School of Mathematical Sciences, Inner Mongolia University, Hohhot, 010021, China","institution_ids":["https://openalex.org/I2722730"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5115599758","display_name":"Yong Wang","orcid":"https://orcid.org/0000-0003-0695-5273"},"institutions":[{"id":"https://openalex.org/I18489884","display_name":"Kunming Institute of Zoology","ror":"https://ror.org/03m0vk445","country_code":"CN","type":"facility","lineage":["https://openalex.org/I18489884","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210095018","display_name":"National Center for Mathematics and Interdisciplinary Sciences","ror":"https://ror.org/00s97k668","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210095018"]},{"id":"https://openalex.org/I4210120485","display_name":"Academy of Mathematics and Systems Science","ror":"https://ror.org/02jkmyk67","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210120485"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yong Wang","raw_affiliation_strings":["CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences , Beijing 100190,","Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences , Kunming 650223,","Key Laboratory of Systems Biology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Chinese Academy of Sciences , Hangzhou 330106,","School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences , Beijing 100049,","Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, 650223, China","CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China","Key Laboratory of Systems Biology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Hangzhou, 330106, China","School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, 100049, China"],"affiliations":[{"raw_affiliation_string":"CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences , Beijing 100190,","institution_ids":["https://openalex.org/I4210120485"]},{"raw_affiliation_string":"Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences , Kunming 650223,","institution_ids":["https://openalex.org/I18489884"]},{"raw_affiliation_string":"Key Laboratory of Systems Biology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Chinese Academy of Sciences , Hangzhou 330106,","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences , Beijing 100049,","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, 650223, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"CEMS, NCMIS, HCMS, MDIS, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China","institution_ids":["https://openalex.org/I4210120485","https://openalex.org/I4210095018","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Key Laboratory of Systems Biology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Hangzhou, 330106, China","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"School of Mathematics, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, 100049, China","institution_ids":["https://openalex.org/I4210165038"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5114172472"],"corresponding_institution_ids":["https://openalex.org/I2722730"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1105963,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"40","issue":"8","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9751999974250793,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10773","display_name":"Extracellular vesicles in disease","score":0.9514999985694885,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7406706809997559},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.6801377534866333},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6085025072097778},{"id":"https://openalex.org/keywords/cluster","display_name":"Cluster (spacecraft)","score":0.554699182510376},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5459311604499817},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4530269503593445},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.4457821249961853},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4262761175632477},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3335961103439331},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1883752942085266},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1478477418422699},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11547094583511353},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.09332230687141418},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.06737560033798218},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.0646962821483612}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7406706809997559},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.6801377534866333},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6085025072097778},{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.554699182510376},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5459311604499817},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4530269503593445},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.4457821249961853},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4262761175632477},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3335961103439331},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1883752942085266},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1478477418422699},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11547094583511353},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.09332230687141418},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.06737560033798218},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0646962821483612},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btae480","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae480","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39073888","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39073888","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11520419","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11520419","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae480","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae480","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G136121912","display_name":null,"funder_award_id":"12025107","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G395067120","display_name":null,"funder_award_id":"2022YFA1004800","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G6967058303","display_name":null,"funder_award_id":"11688101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":65,"referenced_works":["https://openalex.org/W1631320694","https://openalex.org/W1960734071","https://openalex.org/W1965863160","https://openalex.org/W2019552331","https://openalex.org/W2056827131","https://openalex.org/W2068115726","https://openalex.org/W2070339716","https://openalex.org/W2072319015","https://openalex.org/W2074549465","https://openalex.org/W2121690903","https://openalex.org/W2131681506","https://openalex.org/W2135937351","https://openalex.org/W2140465881","https://openalex.org/W2198371822","https://openalex.org/W2288284086","https://openalex.org/W2523620612","https://openalex.org/W2598326928","https://openalex.org/W2605810679","https://openalex.org/W2753908609","https://openalex.org/W2763574125","https://openalex.org/W2794521141","https://openalex.org/W2798368076","https://openalex.org/W2897249806","https://openalex.org/W2901677030","https://openalex.org/W2916020270","https://openalex.org/W2948469692","https://openalex.org/W2949177718","https://openalex.org/W2949237386","https://openalex.org/W2949631571","https://openalex.org/W2951506174","https://openalex.org/W2952100718","https://openalex.org/W2962073995","https://openalex.org/W2965985232","https://openalex.org/W2967177832","https://openalex.org/W2968069281","https://openalex.org/W2984472267","https://openalex.org/W3002417351","https://openalex.org/W3004765765","https://openalex.org/W3015184839","https://openalex.org/W3021272327","https://openalex.org/W3022882652","https://openalex.org/W3032943211","https://openalex.org/W3036429887","https://openalex.org/W3049774397","https://openalex.org/W3099768174","https://openalex.org/W3103797259","https://openalex.org/W3106188259","https://openalex.org/W3121168830","https://openalex.org/W3159175200","https://openalex.org/W3176693948","https://openalex.org/W3194569097","https://openalex.org/W3198546360","https://openalex.org/W4211096124","https://openalex.org/W4224212751","https://openalex.org/W4225598893","https://openalex.org/W4229017048","https://openalex.org/W4252782584","https://openalex.org/W4285106389","https://openalex.org/W4307432965","https://openalex.org/W4308132330","https://openalex.org/W4310860181","https://openalex.org/W4311814266","https://openalex.org/W4322753855","https://openalex.org/W4386034505","https://openalex.org/W4387639594"],"related_works":["https://openalex.org/W4298130764","https://openalex.org/W2804364458","https://openalex.org/W2132641928","https://openalex.org/W4310225030","https://openalex.org/W2090259340","https://openalex.org/W2393816671","https://openalex.org/W2158836806","https://openalex.org/W2083665254","https://openalex.org/W1926736923","https://openalex.org/W2942177010"],"abstract_inverted_index":{"The":[0],"code":[1],"of":[2],"ClusterMatch":[3],"software":[4],"is":[5],"freely":[6],"available":[7],"at":[8],"https://github.com/AMSSwanglab/ClusterMatch.":[9]},"counts_by_year":[],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
