{"id":"https://openalex.org/W4400605359","doi":"https://doi.org/10.1093/bioinformatics/btae450","title":"Drawing mitochondrial genomes with circularMT","display_name":"Drawing mitochondrial genomes with circularMT","publication_year":2024,"publication_date":"2024-07-01","ids":{"openalex":"https://openalex.org/W4400605359","doi":"https://doi.org/10.1093/bioinformatics/btae450","pmid":"https://pubmed.ncbi.nlm.nih.gov/39002115"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae450","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/7/btae450/58653421/btae450.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/40/7/btae450/58653421/btae450.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005583072","display_name":"Simon J. Goodman","orcid":"https://orcid.org/0000-0003-4118-8575"},"institutions":[{"id":"https://openalex.org/I130828816","display_name":"University of Leeds","ror":"https://ror.org/024mrxd33","country_code":"GB","type":"education","lineage":["https://openalex.org/I130828816"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Simon J Goodman","raw_affiliation_strings":["School of Biology, Faculty of Biological Science, University of Leeds , Leeds LS2 9JT, United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Biology, Faculty of Biological Science, University of Leeds , Leeds LS2 9JT, United Kingdom","institution_ids":["https://openalex.org/I130828816"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086164504","display_name":"Ian Carr","orcid":"https://orcid.org/0000-0001-9544-1068"},"institutions":[{"id":"https://openalex.org/I130828816","display_name":"University of Leeds","ror":"https://ror.org/024mrxd33","country_code":"GB","type":"education","lineage":["https://openalex.org/I130828816"]},{"id":"https://openalex.org/I2801331674","display_name":"St James's University Hospital","ror":"https://ror.org/013s89d74","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2799390153","https://openalex.org/I2801331674"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ian M Carr","raw_affiliation_strings":["Leeds Institute of Medical Research at St James's, School of Medicine, University of Leeds , Leeds LS9 7TF, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Leeds Institute of Medical Research at St James's, School of Medicine, University of Leeds , Leeds LS9 7TF, United Kingdom","institution_ids":["https://openalex.org/I2801331674","https://openalex.org/I130828816"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5005583072"],"corresponding_institution_ids":["https://openalex.org/I130828816"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.3109,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.88500271,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"40","issue":"7","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12388","display_name":"Identification and Quantification in Food","score":0.9519000053405762,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6981096267700195},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.580001950263977},{"id":"https://openalex.org/keywords/mitochondrial-dna","display_name":"Mitochondrial DNA","score":0.5759590864181519},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5073947310447693},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.46510323882102966},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.46020597219467163},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.45614951848983765},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4459364414215088},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.43364813923835754},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3022623658180237},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25908005237579346},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08057448267936707}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6981096267700195},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.580001950263977},{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.5759590864181519},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5073947310447693},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.46510323882102966},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.46020597219467163},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.45614951848983765},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4459364414215088},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.43364813923835754},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3022623658180237},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25908005237579346},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08057448267936707}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btae450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae450","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/7/btae450/58653421/btae450.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39002115","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39002115","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:eprints.whiterose.ac.uk:214870","is_oa":true,"landing_page_url":null,"pdf_url":"https://eprints.whiterose.ac.uk/214870/9/Goodman_and_Carr-CircMT-Bioinformatics_final.pdf","source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:11272167","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11272167","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11272167/pdf/btae450.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae450","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae450","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/7/btae450/58653421/btae450.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400605359.pdf","grobid_xml":"https://content.openalex.org/works/W4400605359.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1989083100","https://openalex.org/W2012006993","https://openalex.org/W2024590669","https://openalex.org/W2070842365","https://openalex.org/W2093343912","https://openalex.org/W2096525273","https://openalex.org/W2099388167","https://openalex.org/W2131286305","https://openalex.org/W2152710582","https://openalex.org/W2158804744","https://openalex.org/W2899238758","https://openalex.org/W3010952587","https://openalex.org/W3084201551","https://openalex.org/W3214785274","https://openalex.org/W4205440119","https://openalex.org/W4206587427","https://openalex.org/W4223599530","https://openalex.org/W4226051960","https://openalex.org/W4289274885"],"related_works":["https://openalex.org/W2326369733","https://openalex.org/W2567787466","https://openalex.org/W4308441232","https://openalex.org/W2022430805","https://openalex.org/W2068493848","https://openalex.org/W2433011597","https://openalex.org/W2058866756","https://openalex.org/W4312203868","https://openalex.org/W1990401969","https://openalex.org/W2387480278"],"abstract_inverted_index":{"This":[0],"paper":[1],"has":[2],"no":[3],"supplementary":[4],"data.":[5]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
