{"id":"https://openalex.org/W4400140827","doi":"https://doi.org/10.1093/bioinformatics/btae216","title":"Probabilistic pathway-based multimodal factor analysis","display_name":"Probabilistic pathway-based multimodal factor analysis","publication_year":2024,"publication_date":"2024-06-28","ids":{"openalex":"https://openalex.org/W4400140827","doi":"https://doi.org/10.1093/bioinformatics/btae216","pmid":"https://pubmed.ncbi.nlm.nih.gov/38940152"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae216","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae216","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i189/58585794/btae216.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i189/58585794/btae216.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5104338904","display_name":"Alexander Immer","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210135521","display_name":"Max Planck Institute for Intelligent Systems","ror":"https://ror.org/04fq9j139","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210135521"]}],"countries":["CH","DE"],"is_corresponding":true,"raw_author_name":"Alexander Immer","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Max Planck Institute for Intelligent Systems , 72076 T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Max Planck Institute for Intelligent Systems , 72076 T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210135521"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038601102","display_name":"Stefan G. Stark","orcid":"https://orcid.org/0000-0003-2478-9512"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Stefan G Stark","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040470585","display_name":"Francis Jacob","orcid":"https://orcid.org/0000-0002-0446-1942"},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]},{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Francis Jacob","raw_affiliation_strings":["Ovarian Cancer Research, Department of Biomedicine, University Hospital Basel and University of Basel , 4031 Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ovarian Cancer Research, Department of Biomedicine, University Hospital Basel and University of Basel , 4031 Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264","https://openalex.org/I1850255"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049334079","display_name":"Ximena Bonilla","orcid":"https://orcid.org/0000-0002-4950-6825"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Ximena Bonilla","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103035131","display_name":"Tinu Thomas","orcid":"https://orcid.org/0000-0002-0952-5191"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Tinu Thomas","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070168682","display_name":"Andr\u00e9 Kahles","orcid":"https://orcid.org/0000-0002-3411-0692"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Kahles","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-3411-0692","affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038565479","display_name":"Sandra Goetze","orcid":"https://orcid.org/0000-0001-6880-8020"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Sandra Goetze","raw_affiliation_strings":["ETH PHRT Swiss Multi-Omics Center (SMOC) , 8093 Zurich, Switzerland","Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ETH PHRT Swiss Multi-Omics Center (SMOC) , 8093 Zurich, Switzerland","institution_ids":[]},{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071197206","display_name":"Emanuela S. Milani","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Emanuela S Milani","raw_affiliation_strings":["Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070272273","display_name":"Bernd Wollscheid","orcid":"https://orcid.org/0000-0002-3923-1610"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bernd Wollscheid","raw_affiliation_strings":["Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057298655","display_name":"Rudolf Aebersold","orcid":"https://orcid.org/0000-0002-9576-3267"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rudolf Aebersold","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034250899","display_name":"Melike Ak","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Melike Ak","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001950261","display_name":"Faisal Alquaddoomi","orcid":"https://orcid.org/0000-0003-4297-8747"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Faisal S Al-Quaddoomi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113270358","display_name":"Silvana I. Albert","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Silvana I Albert","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002326210","display_name":"Jonas Albinus","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jonas Albinus","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051330037","display_name":"Ilaria Alborelli","orcid":"https://orcid.org/0000-0001-7849-3958"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ilaria Alborelli","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026343128","display_name":"Sonali Andani","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sonali Andani","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042722665","display_name":"Per-Olof Attinger","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Per-Olof Attinger","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002292400","display_name":"Marina Bacac","orcid":"https://orcid.org/0000-0003-0581-9579"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marina Bacac","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015379488","display_name":"Daniel Baumhoer","orcid":"https://orcid.org/0000-0002-2137-7507"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Daniel Baumhoer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017647895","display_name":"Beatrice Beck\u2010Schimmer","orcid":"https://orcid.org/0000-0002-0648-6115"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Beatrice Beck-Schimmer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035497488","display_name":"Niko Beerenwinkel","orcid":"https://orcid.org/0000-0002-0573-6119"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Niko Beerenwinkel","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053668445","display_name":"Christian Beisel","orcid":"https://orcid.org/0000-0001-5360-2193"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christian Beisel","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024054789","display_name":"Lara Bernasconi","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lara Bernasconi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059488186","display_name":"Anne Bertolini","orcid":"https://orcid.org/0000-0003-0691-0489"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anne Bertolini","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010642463","display_name":"Bernd Bodenmiller","orcid":"https://orcid.org/0000-0002-6325-7861"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bernd Bodenmiller","raw_affiliation_strings":["Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049334079","display_name":"Ximena Bonilla","orcid":"https://orcid.org/0000-0002-4950-6825"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Ximena Bonilla","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010834583","display_name":"Lars Bosshard","orcid":"https://orcid.org/0000-0002-4550-4777"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lars Bosshard","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091444011","display_name":"Byron Calgua","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Byron Calgua","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039484803","display_name":"Ruben Casanova","orcid":"https://orcid.org/0000-0002-3957-8120"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ruben Casanova","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069576688","display_name":"St\u00e9phane Chevrier","orcid":"https://orcid.org/0000-0002-9216-7910"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"St\u00e9phane Chevrier","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015204578","display_name":"Natalia Chicherova","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natalia Chicherova","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005735057","display_name":"Ricardo Coelho","orcid":"https://orcid.org/0000-0002-9340-3612"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ricardo Coelho","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062938215","display_name":"Maya D\u2019Costa","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Maya D'Costa","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039424527","display_name":"Esther Danenberg","orcid":"https://orcid.org/0000-0002-1799-4457"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Esther Danenberg","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076892999","display_name":"Natalie R. Davidson","orcid":"https://orcid.org/0000-0002-1745-8072"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natalie R Davidson","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108511661","display_name":"Monica-Andreea Dr\u0103gan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Monica-Andreea Dr\u0103gan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089297467","display_name":"Reinhard Dummer","orcid":"https://orcid.org/0000-0002-2279-6906"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Reinhard Dummer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005136695","display_name":"Stefanie Engler","orcid":"https://orcid.org/0009-0002-3908-8356"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stefanie Engler","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029424034","display_name":"Martin Erkens","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Martin Erkens","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028404075","display_name":"Katja Eschbach","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katja Eschbach","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023768805","display_name":"Cinzia Esposito","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cinzia Esposito","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003887396","display_name":"Andr\u00e9 Fedier","orcid":"https://orcid.org/0000-0002-5613-8629"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Fedier","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045484651","display_name":"Pedro Ferreira","orcid":"https://orcid.org/0000-0003-0559-6125"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pedro F Ferreira","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093793517","display_name":"Joanna Ficek-Pascual","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Joanna Ficek-Pascual","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046878109","display_name":"Anja Frei","orcid":"https://orcid.org/0000-0002-7134-1000"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anja L Frei","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048188229","display_name":"Bruno S. Frey","orcid":"https://orcid.org/0000-0001-5380-6655"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bruno Frey","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038565479","display_name":"Sandra Goetze","orcid":"https://orcid.org/0000-0001-6880-8020"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Sandra Goetze","raw_affiliation_strings":["ETH PHRT Swiss Multi-Omics Center (SMOC) , 8093 Zurich, Switzerland","Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","ETH PHRT Swiss Multi-Omics Center (SMOC), 8093 Zurich, Switzerland","Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ETH PHRT Swiss Multi-Omics Center (SMOC) , 8093 Zurich, Switzerland","institution_ids":[]},{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"ETH PHRT Swiss Multi-Omics Center (SMOC), 8093 Zurich, Switzerland","institution_ids":[]},{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014610359","display_name":"Linda Grob","orcid":"https://orcid.org/0000-0003-3817-7613"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Linda Grob","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049255125","display_name":"Gabriele Gut","orcid":"https://orcid.org/0000-0001-8991-0040"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gabriele Gut","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034219005","display_name":"Detlef G\u00fcnther","orcid":"https://orcid.org/0000-0001-7867-4310"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Detlef G\u00fcnther","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077969371","display_name":"Pirmin Haeuptle","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pirmin Haeuptle","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057030543","display_name":"Viola Heinzelmann\u2010Schwarz","orcid":"https://orcid.org/0000-0002-4056-3225"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Viola Heinzelmann-Schwarz","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006906885","display_name":"Sylvia Herter","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sylvia Herter","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000438273","display_name":"Ren\u00e9 Holtackers","orcid":"https://orcid.org/0009-0006-7599-6684"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rene Holtackers","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045573675","display_name":"Tamara Huesser","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tamara Huesser","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104338904","display_name":"Alexander Immer","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210135521","display_name":"Max Planck Institute for Intelligent Systems","ror":"https://ror.org/04fq9j139","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210135521"]}],"countries":["CH","DE"],"is_corresponding":false,"raw_author_name":"Alexander Immer","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Max Planck Institute for Intelligent Systems , 72076 T\u00fcbingen, Germany","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Max Planck Institute for Intelligent Systems, 72076 T \u20ac ubingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Max Planck Institute for Intelligent Systems , 72076 T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210135521"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Max Planck Institute for Intelligent Systems, 72076 T \u20ac ubingen, Germany","institution_ids":["https://openalex.org/I4210135521"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066422713","display_name":"Anja Irmisch","orcid":"https://orcid.org/0000-0001-9820-1844"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anja Irmisch","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040470585","display_name":"Francis Jacob","orcid":"https://orcid.org/0000-0002-0446-1942"},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]},{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Francis Jacob","raw_affiliation_strings":["Ovarian Cancer Research, Department of Biomedicine, University Hospital Basel and University of Basel , 4031 Basel, Switzerland","Ovarian Cancer Research, Department of Biomedicine, University Hospital Basel and University of Basel, 4031 Basel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ovarian Cancer Research, Department of Biomedicine, University Hospital Basel and University of Basel , 4031 Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264","https://openalex.org/I1850255"]},{"raw_affiliation_string":"Ovarian Cancer Research, Department of Biomedicine, University Hospital Basel and University of Basel, 4031 Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264","https://openalex.org/I1850255"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Andrea Jacobs","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andrea Jacobs","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110149446","display_name":"Tim M. Jaeger","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tim M Jaeger","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102807386","display_name":"Katharina Jahn","orcid":"https://orcid.org/0000-0002-6983-4615"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katharina Jahn","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063965232","display_name":"Alva Rani James","orcid":"https://orcid.org/0000-0001-6098-2761"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alva R James","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070723609","display_name":"Philip Jermann","orcid":"https://orcid.org/0000-0002-8836-4946"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Philip M Jermann","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070168682","display_name":"Andr\u00e9 Kahles","orcid":"https://orcid.org/0000-0002-3411-0692"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Kahles","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031852359","display_name":"Abdullah Kahraman","orcid":"https://orcid.org/0000-0003-3523-4467"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Abdullah Kahraman","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001240413","display_name":"Viktor H. Koelzer","orcid":"https://orcid.org/0000-0001-9206-4885"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Viktor H Koelzer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069543304","display_name":"Werner Kuebler","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Werner Kuebler","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038666930","display_name":"Jack Kuipers","orcid":"https://orcid.org/0000-0001-5357-2705"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jack Kuipers","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022017229","display_name":"Christian P. Kunze","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christian P Kunze","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090489400","display_name":"Christian Kurzeder","orcid":"https://orcid.org/0000-0002-9362-3033"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christian Kurzeder","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022555275","display_name":"Kjong-Van Lehmann","orcid":"https://orcid.org/0000-0002-1936-298X"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210119759","display_name":"Essen University Hospital","ror":"https://ror.org/02na8dn90","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210119759"]},{"id":"https://openalex.org/I4210153755","display_name":"University Hospital Cologne","ror":"https://ror.org/05mxhda18","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210153755"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["CH","DE"],"is_corresponding":false,"raw_author_name":"Kjong-Van Lehmann","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Cancer Research Center Cologne Essen, University Hospital Cologne , 50937 Cologne, Germany","Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen , 52074 Aachen, Germany","Cancer Research Center Cologne Essen, University Hospital Cologne, 50937 Cologne, Germany","ETH Zurich, Zurich, Switzerland","Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen, 52074 Aachen, Germany \ufffd Corresponding author. Biomedical Informatics Group, Department of Computer Science,","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Cancer Research Center Cologne Essen, University Hospital Cologne , 50937 Cologne, Germany","institution_ids":["https://openalex.org/I4210153755","https://openalex.org/I4210119759"]},{"raw_affiliation_string":"Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen , 52074 Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]},{"raw_affiliation_string":"Cancer Research Center Cologne Essen, University Hospital Cologne, 50937 Cologne, Germany","institution_ids":["https://openalex.org/I4210153755","https://openalex.org/I4210119759"]},{"raw_affiliation_string":"ETH Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen, 52074 Aachen, Germany \ufffd Corresponding author. Biomedical Informatics Group, Department of Computer Science,","institution_ids":["https://openalex.org/I887968799"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014269238","display_name":"Mitchell Levesque","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mitchell Levesque","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064294393","display_name":"Ulrike Lischetti","orcid":"https://orcid.org/0000-0002-9956-3043"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ulrike Lischetti","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026739375","display_name":"Flavio C. Lombardo","orcid":"https://orcid.org/0000-0002-4853-6838"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Flavio C Lombardo","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083017237","display_name":"Sebastian Lugert","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sebastian Lugert","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108696706","display_name":"Gerd Maass","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gerd Maass","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008095018","display_name":"Markus G. Manz","orcid":"https://orcid.org/0000-0002-4676-7931"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Markus G Manz","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089681574","display_name":"Philipp Markolin","orcid":"https://orcid.org/0000-0002-8441-8767"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Philipp Markolin","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022859541","display_name":"Martin Mehnert","orcid":"https://orcid.org/0000-0001-7753-1596"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Martin Mehnert","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074131935","display_name":"Julien Mena","orcid":"https://orcid.org/0000-0001-8040-810X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Julien Mena","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046986636","display_name":"Julian M. Metzler","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Julian M Metzler","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034441927","display_name":"Nicola Miglino","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nicola Miglino","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071197206","display_name":"Emanuela S. Milani","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Emanuela S Milani","raw_affiliation_strings":["Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076510325","display_name":"Holger Moch","orcid":"https://orcid.org/0000-0002-7986-2839"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Holger Moch","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052275469","display_name":"Simone Muenst","orcid":"https://orcid.org/0000-0001-7973-1401"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Simone Muenst","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103943631","display_name":"Riccardo Murri","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Riccardo Murri","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057848295","display_name":"Charlotte K.Y. Ng","orcid":"https://orcid.org/0000-0002-6100-0026"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210119759","display_name":"Essen University Hospital","ror":"https://ror.org/02na8dn90","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210119759"]},{"id":"https://openalex.org/I4210153755","display_name":"University Hospital Cologne","ror":"https://ror.org/05mxhda18","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210153755"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["CH","DE"],"is_corresponding":false,"raw_author_name":"Charlotte K Y Ng","raw_affiliation_strings":["Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen, 52074 Aachen, Germany \ufffd Corresponding author. Biomedical Informatics Group, Department of Computer Science,","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Cancer Research Center Cologne Essen, University Hospital Cologne, 50937 Cologne, Germany","ETH Zurich, Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen, 52074 Aachen, Germany \ufffd Corresponding author. Biomedical Informatics Group, Department of Computer Science,","institution_ids":["https://openalex.org/I887968799"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Cancer Research Center Cologne Essen, University Hospital Cologne, 50937 Cologne, Germany","institution_ids":["https://openalex.org/I4210153755","https://openalex.org/I4210119759"]},{"raw_affiliation_string":"ETH Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020467030","display_name":"Stefan Nicolet","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Stefan Nicolet","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101514604","display_name":"Marta Nowak","orcid":"https://orcid.org/0000-0003-2416-1354"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marta Nowak","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052785860","display_name":"M\u00f3nica N\u00fa\u00f1ez L\u00f3pez","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Monica Nunez Lopez","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008430398","display_name":"Patrick G. A. Pedrioli","orcid":"https://orcid.org/0000-0001-6719-9139"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Patrick G A Pedrioli","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029069228","display_name":"Lucas Pelkmans","orcid":"https://orcid.org/0000-0002-6754-9730"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lucas Pelkmans","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051087530","display_name":"Salvatore Piscuoglio","orcid":"https://orcid.org/0000-0003-2686-2939"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Salvatore Piscuoglio","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036003677","display_name":"Michael Prummer","orcid":"https://orcid.org/0000-0001-9896-3929"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Prummer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5099712465","display_name":"Pr\u00e9lot Laurie","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pr\u00e9lot Laurie","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086630037","display_name":"Natalie Rimmer","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210135521","display_name":"Max Planck Institute for Intelligent Systems","ror":"https://ror.org/04fq9j139","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210135521"]}],"countries":["CH","DE"],"is_corresponding":false,"raw_author_name":"Natalie Rimmer","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Max Planck Institute for Intelligent Systems, 72076 T \u20ac ubingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Max Planck Institute for Intelligent Systems, 72076 T \u20ac ubingen, Germany","institution_ids":["https://openalex.org/I4210135521"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110308185","display_name":"Mathilde Ritter","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mathilde Ritter","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059938229","display_name":"Christian Rommel","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christian Rommel","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003459875","display_name":"Mar\u00eda L. Rosano-Gonz\u00e1lez","orcid":"https://orcid.org/0000-0002-6247-5728"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mar\u00eda L Rosano-Gonz\u00e1lez","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035416263","display_name":"Gunnar R\u00e4tsch","orcid":"https://orcid.org/0000-0001-5486-8532"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100468","display_name":"University Hospital of Zurich","ror":"https://ror.org/01462r250","country_code":"CH","type":"funder","lineage":["https://openalex.org/I4210100468"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Gunnar R\u00e4tsch","raw_affiliation_strings":["AI Center at ETH Zurich , 8092 Zurich, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Biomedical Informatics Research, University Hospital Zurich , 8006 Zurich, Switzerland","Department of Biology, ETH Zurich , 8049 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"AI Center at ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Biomedical Informatics Research, University Hospital Zurich , 8006 Zurich, Switzerland","institution_ids":["https://openalex.org/I4210100468"]},{"raw_affiliation_string":"Department of Biology, ETH Zurich , 8049 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072197022","display_name":"Natascha Santacroce","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natascha Santacroce","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081406271","display_name":"Jacobo Sarabia del Castillo","orcid":"https://orcid.org/0000-0001-9656-1416"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jacobo Sarabia del Castillo","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057418406","display_name":"Ramona Schlenker","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ramona Schlenker","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021936718","display_name":"Petra Schwalie","orcid":"https://orcid.org/0000-0002-6004-8095"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Petra C Schwalie","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029807014","display_name":"Severin Schwan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Severin Schwan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017265374","display_name":"Tobias Sch\u00e4r","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tobias Sch\u00e4r","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017874343","display_name":"Gabriela Senti","orcid":"https://orcid.org/0000-0002-0103-1162"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gabriela Senti","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049672690","display_name":"Wenguang Shao","orcid":"https://orcid.org/0000-0003-0905-0728"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wenguang Shao","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005041697","display_name":"Franziska Singer","orcid":"https://orcid.org/0000-0002-6017-1595"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Franziska Singer","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004739010","display_name":"Sujana Sivapatham","orcid":"https://orcid.org/0000-0002-2514-2668"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sujana Sivapatham","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046176713","display_name":"Berend Snijder","orcid":"https://orcid.org/0000-0003-3386-6583"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Berend Snijder","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031539885","display_name":"Bettina Sobottka","orcid":"https://orcid.org/0000-0002-0890-5248"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bettina Sobottka","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031590541","display_name":"Vipin T. Sreedharan","orcid":"https://orcid.org/0000-0002-3542-3893"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vipin T Sreedharan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038601102","display_name":"Stefan G. Stark","orcid":"https://orcid.org/0000-0003-2478-9512"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Stefan Stark","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085494082","display_name":"Daniel J. Stekhoven","orcid":"https://orcid.org/0000-0003-3163-3161"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Daniel J Stekhoven","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085221628","display_name":"Tanmay Tanna","orcid":"https://orcid.org/0000-0002-1150-0188"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tanmay Tanna","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058990306","display_name":"Alexandre Theocharides","orcid":"https://orcid.org/0000-0002-1535-8692"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alexandre P A Theocharides","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056239279","display_name":"Tinu M. Thomas","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Tinu M Thomas","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich, 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076197620","display_name":"Markus Tolnay","orcid":"https://orcid.org/0000-0002-7037-066X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Markus Tolnay","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078699074","display_name":"Vinko To\u0161evski","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vinko Tosevski","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078378799","display_name":"Nora C. Toussaint","orcid":"https://orcid.org/0000-0001-7911-7647"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nora C Toussaint","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014852015","display_name":"An\u0131l Tuncel","orcid":"https://orcid.org/0000-0003-0317-2556"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mustafa A Tuncel","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003929119","display_name":"Marina Tusup","orcid":"https://orcid.org/0000-0001-7746-1057"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marina Tusup","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002968128","display_name":"Audrey van Drogen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Audrey Van Drogen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004165533","display_name":"Marcus Vetter","orcid":"https://orcid.org/0009-0004-1003-1078"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marcus Vetter","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038850576","display_name":"Tatjana Vlajnic","orcid":"https://orcid.org/0000-0002-1067-6771"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tatjana Vlajnic","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071048719","display_name":"Sandra Weber","orcid":"https://orcid.org/0000-0003-1100-4210"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Sandra Weber","raw_affiliation_strings":["ETH PHRT Swiss Multi-Omics Center (SMOC), 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ETH PHRT Swiss Multi-Omics Center (SMOC), 8093 Zurich, Switzerland","institution_ids":[]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081638136","display_name":"William P. Weber","orcid":"https://orcid.org/0000-0003-1667-7844"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Walter P Weber","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000370363","display_name":"Rebekka Wegmann","orcid":"https://orcid.org/0000-0001-9616-3303"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rebekka Wegmann","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017177249","display_name":"Michael Weller","orcid":"https://orcid.org/0000-0002-1748-174X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Weller","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023595952","display_name":"Fabian Wendt","orcid":"https://orcid.org/0000-0002-2501-536X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fabian Wendt","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053623467","display_name":"Norbert Wey","orcid":"https://orcid.org/0000-0002-3578-2968"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Norbert Wey","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012693904","display_name":"Andreas Wicki","orcid":"https://orcid.org/0000-0002-2924-8080"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andreas Wicki","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052340797","display_name":"Mattheus H. E. Wildschut","orcid":"https://orcid.org/0000-0002-6460-3084"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mattheus H E Wildschut","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070272273","display_name":"Bernd Wollscheid","orcid":"https://orcid.org/0000-0002-3923-1610"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bernd Wollscheid","raw_affiliation_strings":["Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich , 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, 8093 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033268266","display_name":"Shuqing Yu","orcid":"https://orcid.org/0000-0001-8012-2398"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shuqing Yu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044593631","display_name":"Johanna Ziegler","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Johanna Ziegler","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108754338","display_name":"Marc Zimmermann","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marc Zimmermann","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062674871","display_name":"Martin Zoche","orcid":"https://orcid.org/0000-0002-0421-7229"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Martin Zoche","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029918610","display_name":"Gregor Zuend","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gregor Zuend","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035416263","display_name":"Gunnar R\u00e4tsch","orcid":"https://orcid.org/0000-0001-5486-8532"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210100468","display_name":"University Hospital of Zurich","ror":"https://ror.org/01462r250","country_code":"CH","type":"funder","lineage":["https://openalex.org/I4210100468"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Gunnar R\u00e4tsch","raw_affiliation_strings":["AI Center at ETH Zurich , 8092 Zurich, Switzerland","Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Biomedical Informatics Research, University Hospital Zurich , 8006 Zurich, Switzerland","Department of Biology, ETH Zurich , 8049 Zurich, Switzerland","Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-5486-8532","affiliations":[{"raw_affiliation_string":"AI Center at ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Biomedical Informatics Research, University Hospital Zurich , 8006 Zurich, Switzerland","institution_ids":["https://openalex.org/I4210100468"]},{"raw_affiliation_string":"Department of Biology, ETH Zurich , 8049 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics , 1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022555275","display_name":"Kjong-Van Lehmann","orcid":"https://orcid.org/0000-0002-1936-298X"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210119759","display_name":"Essen University Hospital","ror":"https://ror.org/02na8dn90","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210119759"]},{"id":"https://openalex.org/I4210153755","display_name":"University Hospital Cologne","ror":"https://ror.org/05mxhda18","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210153755"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["CH","DE"],"is_corresponding":false,"raw_author_name":"Kjong-Van Lehmann","raw_affiliation_strings":["Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","Cancer Research Center Cologne Essen, University Hospital Cologne , 50937 Cologne, Germany","Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen , 52074 Aachen, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1936-298X","affiliations":[{"raw_affiliation_string":"Biomedical Informatics Group, Department of Computer Science, ETH Zurich , 8092 Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]},{"raw_affiliation_string":"Cancer Research Center Cologne Essen, University Hospital Cologne , 50937 Cologne, Germany","institution_ids":["https://openalex.org/I4210153755","https://openalex.org/I4210119759"]},{"raw_affiliation_string":"Joint Research Center for Computational Biomedicine, University Hospital RWTH Aachen , 52074 Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":142,"corresponding_author_ids":["https://openalex.org/A5104338904"],"corresponding_institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4210135521"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09136737,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"40","issue":"Supplement_1","first_page":"i189","last_page":"i198"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.8628000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.8628000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.01679999940097332,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.014600000344216824,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.7557262778282166},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6294659376144409},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5565457344055176},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4655647277832031},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.43409204483032227},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.43239572644233704},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3444766402244568}],"concepts":[{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.7557262778282166},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6294659376144409},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5565457344055176},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4655647277832031},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43409204483032227},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.43239572644233704},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3444766402244568},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1093/bioinformatics/btae216","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae216","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i189/58585794/btae216.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38940152","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38940152","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:www.zora.uzh.ch:262401","is_oa":true,"landing_page_url":"https://www.zora.uzh.ch/id/eprint/262401/13/ZORA_btae216.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Immer, Alexander; Stark, Stefan G; Jacob, Francis; Bonilla, Ximena; Thomas, Tinu; Kahles, Andr\u00e9; Goetze, Sandra; Milani, Emanuela S; Wollscheid, Bernd; Aebersold, Rudolf; Ak, Melike; Al-Quaddoomi, Faisal S; Albert, Silvana I; Albinus, Jonas; Alborelli, Ilaria; Andani, Sonali; Attinger, Per-Olof; Bacac, Marina; Baumhoer, Daniel; Beck-Schimmer, Beatrice; Beerenwinkel, Niko; Beisel, Christian; Bernasconi, Lara; Bertolini, Anne; Bodenmiller, Bernd; Bonilla, Ximena; Bosshard, Lars; Calgua, Byron; Casanova, Ruben; et al; Pelkmans, Lucas  (2024). Probabilistic pathway-based multimodal factor analysis.  Bioinformatics, 40(Suppl 1):i189-i198.","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:11256960","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11256960","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11256960/pdf/btae216.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:doi:10.5167/uzh-262401","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:publications.rwth-aachen.de:1032787","is_oa":true,"landing_page_url":"https://publications.rwth-aachen.de/record/1032787","pdf_url":null,"source":{"id":"https://openalex.org/S4306401362","display_name":"RWTH Publications (RWTH Aachen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I887968799","host_organization_name":"RWTH Aachen University","host_organization_lineage":["https://openalex.org/I887968799"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"32. Annual Conference on Intelligent Systems for Molecular Biology, ISMB 2024, Montr\u00e9al, Canada, 2024-07-12 - 2024-07-16","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/681840","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/681840","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 40 (1)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"doi:10.3929/ethz-b-000681840","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000681840","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"},{"id":"doi:10.5167/uzh-262401","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-262401","pdf_url":null,"source":{"id":"https://openalex.org/S7407051291","display_name":"Universit\u00e4t Z\u00fcrich, ZORA","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae216","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae216","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i189/58585794/btae216.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F3181433417","display_name":"Land Nordrhein-Westfalen","ror":"https://ror.org/007s7nj58"},{"id":"https://openalex.org/F4320331705","display_name":"Max Planck ETH Center for Learning Systems","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400140827.pdf","grobid_xml":"https://content.openalex.org/works/W4400140827.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W1962325108","https://openalex.org/W1965026065","https://openalex.org/W2010457001","https://openalex.org/W2116542188","https://openalex.org/W2134469465","https://openalex.org/W2158825237","https://openalex.org/W2214074259","https://openalex.org/W2396911170","https://openalex.org/W2788142646","https://openalex.org/W2808845633","https://openalex.org/W2897704361","https://openalex.org/W2911546748","https://openalex.org/W2945183595","https://openalex.org/W2949419207","https://openalex.org/W2951090538","https://openalex.org/W2954825129","https://openalex.org/W3093407181","https://openalex.org/W3122308234","https://openalex.org/W3123792751","https://openalex.org/W3136918052","https://openalex.org/W3205594709","https://openalex.org/W4311437317","https://openalex.org/W6641162989","https://openalex.org/W6641678419","https://openalex.org/W6696835939"],"related_works":["https://openalex.org/W2161444195","https://openalex.org/W2589019771","https://openalex.org/W2985540061","https://openalex.org/W2185012154","https://openalex.org/W4252521128","https://openalex.org/W4287867321","https://openalex.org/W2911183501","https://openalex.org/W2104014222","https://openalex.org/W2153465672","https://openalex.org/W2494523064"],"abstract_inverted_index":{"MOTIVATION:":[0],"Multimodal":[1,35],"profiling":[2,36,124],"strategies":[3,32,37],"promise":[4],"to":[5,51,154,218],"produce":[6],"more":[7],"informative":[8],"insights":[9],"into":[10],"biomedical":[11],"cohorts":[12],"via":[13],"the":[14,17,27,41,66,92,112,129,160,187,213,223],"integration":[15],"of":[16,29,43,68,94,114,131,195,215,225],"information":[18],"each":[19],"modality":[20],"contributes.":[21],"To":[22],"perform":[23],"this":[24,216],"integration,":[25],"however,":[26,74],"development":[28],"novel":[30,105],"analytical":[31],"is":[33,148,255],"needed.":[34],"often":[38,89],"come":[39],"at":[40,261],"expense":[42],"lower":[44],"sample":[45,168,248],"numbers,":[46],"which":[47,126],"can":[48],"challenge":[49],"methods":[50],"uncover":[52],"shared":[53],"signals":[54],"across":[55,122],"a":[56,104,136,144,193],"cohort.":[57],"Thus,":[58],"factor":[59,109],"analysis":[60,67,93,110],"approaches":[61],"are":[62,82],"commonly":[63],"used":[64],"for":[65,107,128,245],"high-dimensional":[69],"data":[70],"in":[71,257],"molecular":[72],"biology,":[73,240],"they":[75],"typically":[76],"do":[77],"not":[78],"yield":[79],"representations":[80],"that":[81,147,202,236],"directly":[83],"interpretable,":[84],"whereas":[85],"many":[86],"research":[87],"questions":[88],"center":[90],"around":[91],"pathways":[95,220],"associated":[96,206,221],"with":[97,139,207,222],"specific":[98,226],"observations.":[99],"RESULTS:":[100],"We":[101,162,210],"develop":[102],"PathFA,":[103],"approach":[106,138,217],"multimodal":[108,123,141,247],"over":[111],"space":[113],"pathways.":[115],"PathFA":[116,134,198],"produces":[117],"integrative":[118,140],"and":[119,152,174,178,259],"interpretable":[120],"views":[121],"technologies,":[125],"allow":[127],"derivation":[130],"concrete":[132],"hypotheses.":[133],"combines":[135],"pathway-learning":[137],"capability":[142],"under":[143],"Bayesian":[145],"procedure":[146],"efficient,":[149],"hyper-parameter":[150],"free,":[151],"able":[153],"automatically":[155],"infer":[156],"observation":[157],"noise":[158],"from":[159,181,186],"data.":[161],"demonstrate":[163,212],"strong":[164],"performance":[165],"on":[166,175],"small":[167],"sizes":[169],"within":[170],"our":[171],"simulation":[172],"framework":[173],"matched":[176],"proteomics":[177],"transcriptomics":[179],"profiles":[180],"real":[182],"tumor":[183,231],"samples":[184],"taken":[185],"Swiss":[188],"Tumor":[189],"Profiler":[190],"consortium.":[191],"On":[192],"subcohort":[194],"melanoma":[196],"patients,":[197],"recovers":[199],"pathway":[200],"activity":[201],"has":[203],"been":[204],"independently":[205],"poor":[208],"outcome.":[209],"further":[211],"ability":[214],"identify":[219],"presence":[224],"cell-types":[227],"as":[228,230],"well":[229,243],"heterogeneity.":[232],"Our":[233],"results":[234],"show":[235],"we":[237],"capture":[238],"known":[239],"making":[241],"it":[242],"suited":[244],"analyzing":[246],"cohorts.":[249],"AVAILABILITY":[250],"AND":[251],"IMPLEMENTATION:":[252],"The":[253],"tool":[254],"implemented":[256],"python":[258],"available":[260],"https://github.com/ratschlab/path-fa.":[262]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}