{"id":"https://openalex.org/W4400140846","doi":"https://doi.org/10.1093/bioinformatics/btae208","title":"Teaching bioinformatics through the analysis of SARS-CoV-2: project-based training for computer science students","display_name":"Teaching bioinformatics through the analysis of SARS-CoV-2: project-based training for computer science students","publication_year":2024,"publication_date":"2024-06-28","ids":{"openalex":"https://openalex.org/W4400140846","doi":"https://doi.org/10.1093/bioinformatics/btae208","pmid":"https://pubmed.ncbi.nlm.nih.gov/38940150"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae208","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i20/58354881/btae208.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i20/58354881/btae208.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054118774","display_name":"Pavlin G. Poli\u010dar","orcid":"https://orcid.org/0000-0002-6462-9372"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":true,"raw_author_name":"Pavlin G Poli\u010dar","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,"],"raw_orcid":"https://orcid.org/0000-0002-6462-9372","affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092085776","display_name":"Martin \u0160pendl","orcid":"https://orcid.org/0009-0008-0796-8985"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Martin \u0160pendl","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,"],"raw_orcid":"https://orcid.org/0009-0008-0796-8985","affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070653907","display_name":"Toma\u017e Curk","orcid":"https://orcid.org/0000-0003-4888-7256"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Toma\u017e Curk","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,"],"raw_orcid":"https://orcid.org/0000-0003-4888-7256","affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073792028","display_name":"Bla\u017e Zupan","orcid":"https://orcid.org/0000-0002-5864-7056"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]},{"id":"https://openalex.org/I4210107629","display_name":"Baylor School","ror":"https://ror.org/01qd58v91","country_code":"US","type":"education","lineage":["https://openalex.org/I4210107629"]}],"countries":["SI","US"],"is_corresponding":false,"raw_author_name":"Bla\u017e Zupan","raw_affiliation_strings":["Department of Education, Innovation and Technology, Baylor College of Medicine , 1 Baylor Plz , Houston, TX 77030,","Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,","Department of Education, Innovation and Technology, Baylor College of Medicine, 1 Baylor Plz, Houston, TX 77030, United States"],"raw_orcid":"https://orcid.org/0000-0002-5864-7056","affiliations":[{"raw_affiliation_string":"Department of Education, Innovation and Technology, Baylor College of Medicine , 1 Baylor Plz , Houston, TX 77030,","institution_ids":["https://openalex.org/I181547552","https://openalex.org/I4210107629"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana , Ve\u010dna pot 113 , 1000 Ljubljana,","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Department of Education, Innovation and Technology, Baylor College of Medicine, 1 Baylor Plz, Houston, TX 77030, United States","institution_ids":["https://openalex.org/I181547552"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5054118774"],"corresponding_institution_ids":["https://openalex.org/I153976015"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.8119,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.69782333,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"40","issue":"Supplement_1","first_page":"i20","last_page":"i29"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12327","display_name":"Various Chemistry Research Topics","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10533","display_name":"Teaching and Learning Programming","score":0.0008999999845400453,"subfield":{"id":"https://openalex.org/subfields/1706","display_name":"Computer Science Applications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6701385378837585},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6326816082000732},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5574825406074524},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5364822149276733},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.4623177647590637},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3260750472545624},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.3211364150047302},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17958027124404907},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12416359782218933},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.12004494667053223}],"concepts":[{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6701385378837585},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6326816082000732},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5574825406074524},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5364822149276733},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.4623177647590637},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3260750472545624},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.3211364150047302},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17958027124404907},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12416359782218933},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.12004494667053223},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.0},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.0},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013334","descriptor_name":"Students","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btae208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae208","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i20/58354881/btae208.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38940150","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38940150","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11211835","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11211835","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11211835/pdf/btae208.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:digitalcommons.library.tmc.edu:baylor_docs-1626","is_oa":false,"landing_page_url":"https://digitalcommons.library.tmc.edu/baylor_docs/624","pdf_url":null,"source":{"id":"https://openalex.org/S4377196655","display_name":"Digital Commons-TMC (Texas Medical Center)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1337852284","host_organization_name":"Texas Medical Center","host_organization_lineage":["https://openalex.org/I1337852284"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty and Staff Publications","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae208","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae208","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/40/Supplement_1/i20/58354881/btae208.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G3826092533","display_name":null,"funder_award_id":"P2-0209 and L2-3170","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"}],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400140846.pdf"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1557284415","https://openalex.org/W2003493086","https://openalex.org/W2065461553","https://openalex.org/W2071892601","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2097706568","https://openalex.org/W2187089797","https://openalex.org/W2735025215","https://openalex.org/W2749319771","https://openalex.org/W2781968731","https://openalex.org/W2783454336","https://openalex.org/W2800392236","https://openalex.org/W2940431758","https://openalex.org/W3013152614","https://openalex.org/W3034168389","https://openalex.org/W3035265089","https://openalex.org/W4210705244","https://openalex.org/W4250857377","https://openalex.org/W4302316018","https://openalex.org/W6674647444"],"related_works":["https://openalex.org/W3036314732","https://openalex.org/W3009669391","https://openalex.org/W4382894326","https://openalex.org/W3176864053","https://openalex.org/W4206669628","https://openalex.org/W4292098121","https://openalex.org/W3154141118","https://openalex.org/W4388896133","https://openalex.org/W3031607536","https://openalex.org/W4205317059"],"abstract_inverted_index":{"MOTIVATION:":[0],"We":[1],"learn":[2,110,126],"more":[3],"effectively":[4],"through":[5,10],"experience":[6],"and":[7,27,32,78,113,118,125,141,147,150],"reflection":[8],"than":[9],"passive":[11],"reception":[12],"of":[13,73,84,98,135],"information.":[14],"Bioinformatics":[15],"offers":[16],"an":[17],"excellent":[18],"opportunity":[19],"for":[20,56,66],"project-based":[21],"learning.":[22],"Molecular":[23],"data":[24],"are":[25,70,79,159],"abundant":[26],"accessible":[28],"in":[29,35,64],"open":[30],"repositories,":[31],"important":[33],"concepts":[34],"biology":[36,100],"can":[37],"be":[38],"rediscovered":[39],"by":[40],"reanalyzing":[41],"the":[42,46,71,82,85,128,136],"data.":[43],"RESULTS:":[44],"In":[45],"manuscript,":[47],"we":[48,54],"report":[49],"on":[50,162],"five":[51],"hands-on":[52],"assignments":[53,69,137],"designed":[55],"master's":[57],"computer":[58],"science":[59],"students":[60,109],"to":[61,122,131],"train":[62],"them":[63],"bioinformatics":[65,76],"genomics.":[67],"These":[68],"cornerstones":[72],"our":[74],"introductory":[75],"course":[77,157],"centered":[80],"around":[81],"study":[83],"severe":[86],"acute":[87],"respiratory":[88],"syndrome":[89],"coronavirus":[90],"2":[91],"(SARS-CoV-2).":[92],"They":[93],"assume":[94],"no":[95],"prior":[96],"knowledge":[97],"molecular":[99],"but":[101],"do":[102],"require":[103],"programming":[104],"skills.":[105],"Through":[106],"these":[107],"assignments,":[108],"about":[111,127],"genomes":[112],"genes,":[114],"discover":[115],"their":[116,139,143,148],"composition":[117],"function,":[119],"relate":[120],"SARS-CoV-2":[121],"other":[123],"viruses,":[124],"body's":[129],"response":[130],"infection.":[132],"Student":[133],"evaluation":[134],"confirms":[138],"usefulness":[140],"value,":[142],"appropriate":[144],"mastery-level":[145],"difficulty,":[146],"interesting":[149],"motivating":[151],"storyline.":[152],"AVAILABILITY":[153],"AND":[154],"IMPLEMENTATION:":[155],"The":[156],"materials":[158],"freely":[160],"available":[161],"GitHub":[163],"at":[164],"https://github.com/IB-ULFRI.":[165]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
