{"id":"https://openalex.org/W4393185961","doi":"https://doi.org/10.1093/bioinformatics/btae159","title":"HyperTMO: a trusted multi-omics integration framework based on hypergraph convolutional network for patient classification","display_name":"HyperTMO: a trusted multi-omics integration framework based on hypergraph convolutional network for patient classification","publication_year":2024,"publication_date":"2024-03-26","ids":{"openalex":"https://openalex.org/W4393185961","doi":"https://doi.org/10.1093/bioinformatics/btae159","pmid":"https://pubmed.ncbi.nlm.nih.gov/38530977"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae159","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae159","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae159/57094594/btae159.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae159/57094594/btae159.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045229486","display_name":"Haohua Wang","orcid":"https://orcid.org/0000-0001-9835-0401"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210092944","display_name":"Dalian University","ror":"https://ror.org/00g2ypp58","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210092944"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Haohua Wang","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology , Dalian, Liaoning 116024, China","School of computer science and technology, Dalian University of Technology, No.2 Linggong Road, 116024, Dalian, Liaoning, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology , Dalian, Liaoning 116024, China","institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"]},{"raw_affiliation_string":"School of computer science and technology, Dalian University of Technology, No.2 Linggong Road, 116024, Dalian, Liaoning, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102816155","display_name":"Kai Lin","orcid":"https://orcid.org/0000-0003-3345-8889"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210092944","display_name":"Dalian University","ror":"https://ror.org/00g2ypp58","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210092944"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Lin","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology , Dalian, Liaoning 116024, China","School of computer science and technology, Dalian University of Technology, No.2 Linggong Road, 116024, Dalian, Liaoning, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology , Dalian, Liaoning 116024, China","institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"]},{"raw_affiliation_string":"School of computer science and technology, Dalian University of Technology, No.2 Linggong Road, 116024, Dalian, Liaoning, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100381999","display_name":"Qiang Zhang","orcid":"https://orcid.org/0000-0003-3776-9799"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210092944","display_name":"Dalian University","ror":"https://ror.org/00g2ypp58","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210092944"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiang Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology , Dalian, Liaoning 116024, China","School of computer science and technology, Dalian University of Technology, No.2 Linggong Road, 116024, Dalian, Liaoning, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology , Dalian, Liaoning 116024, China","institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"]},{"raw_affiliation_string":"School of computer science and technology, Dalian University of Technology, No.2 Linggong Road, 116024, Dalian, Liaoning, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039233052","display_name":"Jinlong Shi","orcid":"https://orcid.org/0000-0003-2674-8685"},"institutions":[{"id":"https://openalex.org/I2802939634","display_name":"Chinese PLA General Hospital","ror":"https://ror.org/04gw3ra78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802939634"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinlong Shi","raw_affiliation_strings":["Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","institution_ids":["https://openalex.org/I2802939634"]},{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China","institution_ids":["https://openalex.org/I2802939634"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100679894","display_name":"Xinyu Song","orcid":"https://orcid.org/0000-0002-1905-3503"},"institutions":[{"id":"https://openalex.org/I2802939634","display_name":"Chinese PLA General Hospital","ror":"https://ror.org/04gw3ra78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802939634"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyu Song","raw_affiliation_strings":["Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","institution_ids":["https://openalex.org/I2802939634"]},{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China","institution_ids":["https://openalex.org/I2802939634"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065682729","display_name":"Jue Wu","orcid":"https://orcid.org/0009-0000-6253-0099"},"institutions":[{"id":"https://openalex.org/I2802939634","display_name":"Chinese PLA General Hospital","ror":"https://ror.org/04gw3ra78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802939634"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jue Wu","raw_affiliation_strings":["Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","institution_ids":["https://openalex.org/I2802939634"]},{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China","institution_ids":["https://openalex.org/I2802939634"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033018631","display_name":"Chenghui Zhao","orcid":"https://orcid.org/0000-0003-2059-630X"},"institutions":[{"id":"https://openalex.org/I2802939634","display_name":"Chinese PLA General Hospital","ror":"https://ror.org/04gw3ra78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802939634"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenghui Zhao","raw_affiliation_strings":["Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","institution_ids":["https://openalex.org/I2802939634"]},{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China","institution_ids":["https://openalex.org/I2802939634"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027802880","display_name":"Kunlun He","orcid":"https://orcid.org/0000-0002-3335-5700"},"institutions":[{"id":"https://openalex.org/I2802939634","display_name":"Chinese PLA General Hospital","ror":"https://ror.org/04gw3ra78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802939634"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kunlun He","raw_affiliation_strings":["Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital , Beijing 100039, China","institution_ids":["https://openalex.org/I2802939634"]},{"raw_affiliation_string":"Research Center for Medical Big Data, Medical Innovation Research Division of Chinese PLA General Hospital, 28 Fuxing Road, 100039, Beijing, China","institution_ids":["https://openalex.org/I2802939634"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5045229486"],"corresponding_institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.7428,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.93811931,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"40","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.7976086735725403},{"id":"https://openalex.org/keywords/hypergraph","display_name":"Hypergraph","score":0.7191588878631592},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7003334760665894},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6072572469711304},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.45930206775665283},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32300275564193726},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2821040749549866},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10986819863319397},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08226573467254639}],"concepts":[{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.7976086735725403},{"id":"https://openalex.org/C2781221856","wikidata":"https://www.wikidata.org/wiki/Q840247","display_name":"Hypergraph","level":2,"score":0.7191588878631592},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7003334760665894},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6072572469711304},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.45930206775665283},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32300275564193726},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2821040749549866},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10986819863319397},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08226573467254639},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001940","descriptor_name":"Breast","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btae159","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae159","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae159/57094594/btae159.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38530977","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38530977","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11212491","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11212491","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11212491/pdf/btae159.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae159","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae159","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae159/57094594/btae159.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3363435710","display_name":null,"funder_award_id":"DUT21TD107","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G8292714235","display_name":null,"funder_award_id":"XLYC2008017","funder_id":"https://openalex.org/F4320329895","funder_display_name":"Liaoning Revitalization Talents Program"}],"funders":[{"id":"https://openalex.org/F4320329895","display_name":"Liaoning Revitalization Talents Program","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4393185961.pdf"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W1964940342","https://openalex.org/W2021833436","https://openalex.org/W2026498605","https://openalex.org/W2052684427","https://openalex.org/W2069429561","https://openalex.org/W2132619562","https://openalex.org/W2144267444","https://openalex.org/W2163922914","https://openalex.org/W2591382767","https://openalex.org/W2610332124","https://openalex.org/W2761668583","https://openalex.org/W2791015340","https://openalex.org/W2885591122","https://openalex.org/W2892880750","https://openalex.org/W2921485464","https://openalex.org/W2938826237","https://openalex.org/W2950985821","https://openalex.org/W2951209146","https://openalex.org/W3017142950","https://openalex.org/W3042221936","https://openalex.org/W3048417086","https://openalex.org/W3104355095","https://openalex.org/W3112212292","https://openalex.org/W3116278528","https://openalex.org/W3139601120","https://openalex.org/W3152893301","https://openalex.org/W3170986249","https://openalex.org/W3173875945","https://openalex.org/W3198628780","https://openalex.org/W3199772305","https://openalex.org/W3217387659","https://openalex.org/W4206271558","https://openalex.org/W4210546025","https://openalex.org/W4224926219","https://openalex.org/W4226112489","https://openalex.org/W4280605145","https://openalex.org/W4301347335","https://openalex.org/W4306385613","https://openalex.org/W4313145914","https://openalex.org/W4317366348","https://openalex.org/W4399647672","https://openalex.org/W6786266798","https://openalex.org/W6869608176"],"related_works":["https://openalex.org/W2924366642","https://openalex.org/W4392558563","https://openalex.org/W3173875945","https://openalex.org/W3159101980","https://openalex.org/W2966125521","https://openalex.org/W2126703991","https://openalex.org/W3003192283","https://openalex.org/W2996736193","https://openalex.org/W2909364225","https://openalex.org/W2610897791"],"abstract_inverted_index":{"HyperTMO":[0],"and":[1],"datasets":[2],"are":[3],"publicly":[4],"available":[5],"at":[6],"https://github.com/ippousyuga/HyperTMO.":[7]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":2}],"updated_date":"2026-03-29T08:15:47.926485","created_date":"2025-10-10T00:00:00"}
