{"id":"https://openalex.org/W4396720067","doi":"https://doi.org/10.1093/bioinformatics/btae134","title":"From cell lines to cancer patients: personalized drug synergy prediction","display_name":"From cell lines to cancer patients: personalized drug synergy prediction","publication_year":2024,"publication_date":"2024-05-01","ids":{"openalex":"https://openalex.org/W4396720067","doi":"https://doi.org/10.1093/bioinformatics/btae134","pmid":"https://pubmed.ncbi.nlm.nih.gov/38718189"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae134","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae134","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae134/57452228/btae134.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae134/57452228/btae134.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068218826","display_name":"Halil \u0130brahim Kuru","orcid":"https://orcid.org/0000-0003-4356-8846"},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Halil Ibrahim Kuru","raw_affiliation_strings":["Department of Computer Engineering, Bilkent University , Ankara 06800, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Bilkent University , Ankara 06800, Turkey","institution_ids":["https://openalex.org/I168864056"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090836372","display_name":"A. Erc\u00fcment \u00c7i\u00e7ek","orcid":"https://orcid.org/0000-0001-8613-6619"},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]},{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["TR","US"],"is_corresponding":false,"raw_author_name":"A Ercument Cicek","raw_affiliation_strings":["Computational Biology Department, Carnegie Mellon University , Pittsburgh 15213, United States","Department of Computer Engineering, Bilkent University , Ankara 06800, Turkey"],"affiliations":[{"raw_affiliation_string":"Computational Biology Department, Carnegie Mellon University , Pittsburgh 15213, United States","institution_ids":["https://openalex.org/I74973139"]},{"raw_affiliation_string":"Department of Computer Engineering, Bilkent University , Ankara 06800, Turkey","institution_ids":["https://openalex.org/I168864056"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051657734","display_name":"\u00d6znur Ta\u015ftan","orcid":"https://orcid.org/0000-0001-7058-5372"},"institutions":[{"id":"https://openalex.org/I134235054","display_name":"Sabanc\u0131 \u00dcniversitesi","ror":"https://ror.org/049asqa32","country_code":"TR","type":"education","lineage":["https://openalex.org/I134235054"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Oznur Tastan","raw_affiliation_strings":["Faculty of Engineering and Natural Sciences, Sabanci University , Istanbul 34956, Turkey"],"affiliations":[{"raw_affiliation_string":"Faculty of Engineering and Natural Sciences, Sabanci University , Istanbul 34956, Turkey","institution_ids":["https://openalex.org/I134235054"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5068218826"],"corresponding_institution_ids":["https://openalex.org/I168864056"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.1925,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.92481203,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"40","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6540540456771851},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.6052758097648621},{"id":"https://openalex.org/keywords/cancer-drugs","display_name":"Cancer drugs","score":0.5425219535827637},{"id":"https://openalex.org/keywords/cancer-cell-lines","display_name":"Cancer cell lines","score":0.5200062394142151},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46588462591171265},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4448454976081848},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4444018304347992},{"id":"https://openalex.org/keywords/drug-response","display_name":"Drug response","score":0.41650205850601196},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.34724459052085876},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.30372756719589233},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.2731561064720154},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.2695159316062927},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2545216381549835},{"id":"https://openalex.org/keywords/cancer-cell","display_name":"Cancer cell","score":0.21999859809875488}],"concepts":[{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6540540456771851},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.6052758097648621},{"id":"https://openalex.org/C3020340455","wikidata":"https://www.wikidata.org/wiki/Q974135","display_name":"Cancer drugs","level":3,"score":0.5425219535827637},{"id":"https://openalex.org/C2994372470","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell lines","level":4,"score":0.5200062394142151},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46588462591171265},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4448454976081848},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4444018304347992},{"id":"https://openalex.org/C2994119904","wikidata":"https://www.wikidata.org/wiki/Q1251001","display_name":"Drug response","level":3,"score":0.41650205850601196},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.34724459052085876},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.30372756719589233},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.2731561064720154},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.2695159316062927},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2545216381549835},{"id":"https://openalex.org/C96232424","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell","level":3,"score":0.21999859809875488}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btae134","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae134","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae134/57452228/btae134.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38718189","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38718189","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11215552","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11215552","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11215552/pdf/btae134.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:figshare.com:article/29951279","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal contribution"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae134","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae134","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae134/57452228/btae134.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5299999713897705,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1179340234","display_name":null,"funder_award_id":"BAGEP","funder_id":"https://openalex.org/F4320325520","funder_display_name":"Bilim Akademisi"}],"funders":[{"id":"https://openalex.org/F4320325520","display_name":"Bilim Akademisi","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4396720067.pdf"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W1435191252","https://openalex.org/W1546436101","https://openalex.org/W1983265239","https://openalex.org/W1996486545","https://openalex.org/W2031441006","https://openalex.org/W2036291018","https://openalex.org/W2053154970","https://openalex.org/W2060737851","https://openalex.org/W2061061337","https://openalex.org/W2062857213","https://openalex.org/W2100563036","https://openalex.org/W2120865735","https://openalex.org/W2125380142","https://openalex.org/W2126726407","https://openalex.org/W2131490500","https://openalex.org/W2136008225","https://openalex.org/W2140239055","https://openalex.org/W2145877930","https://openalex.org/W2165863045","https://openalex.org/W2209382794","https://openalex.org/W2267040404","https://openalex.org/W2461427403","https://openalex.org/W2545245164","https://openalex.org/W2608863179","https://openalex.org/W2751052002","https://openalex.org/W2774112395","https://openalex.org/W2775061087","https://openalex.org/W2790982990","https://openalex.org/W2807463161","https://openalex.org/W2898321887","https://openalex.org/W2919859489","https://openalex.org/W2922229918","https://openalex.org/W2950860419","https://openalex.org/W2951449549","https://openalex.org/W2977895282","https://openalex.org/W2981475131","https://openalex.org/W3042826782","https://openalex.org/W3086347240","https://openalex.org/W3112320269","https://openalex.org/W3127930610","https://openalex.org/W3164087725","https://openalex.org/W3203908308","https://openalex.org/W4206678643","https://openalex.org/W4382631594","https://openalex.org/W6752134831"],"related_works":["https://openalex.org/W1508732282","https://openalex.org/W2159063798","https://openalex.org/W2068142083","https://openalex.org/W3154648057","https://openalex.org/W2758791195","https://openalex.org/W2999563835","https://openalex.org/W2609331662","https://openalex.org/W2353292232","https://openalex.org/W3193181239","https://openalex.org/W3117207241"],"abstract_inverted_index":{"PDSP":[0],"is":[1],"available":[2],"at":[3],"https://github.com/hikuru/PDSP.":[4]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
