{"id":"https://openalex.org/W4391212305","doi":"https://doi.org/10.1093/bioinformatics/btae025","title":"Multi-scale topology and position feature learning and relationship-aware graph reasoning for prediction of drug-related microbes","display_name":"Multi-scale topology and position feature learning and relationship-aware graph reasoning for prediction of drug-related microbes","publication_year":2024,"publication_date":"2024-01-25","ids":{"openalex":"https://openalex.org/W4391212305","doi":"https://doi.org/10.1093/bioinformatics/btae025","pmid":"https://pubmed.ncbi.nlm.nih.gov/38269610"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae025","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae025/56412608/btae025.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae025/56412608/btae025.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028616130","display_name":"Ping Xuan","orcid":"https://orcid.org/0000-0001-5328-691X"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]},{"id":"https://openalex.org/I32574673","display_name":"Shantou University","ror":"https://ror.org/01a099706","country_code":"CN","type":"education","lineage":["https://openalex.org/I32574673"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ping Xuan","raw_affiliation_strings":["Department of Computer Science, Shantou University , Shantou 515063, China","School of Computer Science and Technology, Heilongjiang University , Harbin 150080, China","Department of Computer Science, Shantou University, Shantou, 515063, China","School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Shantou University , Shantou 515063, China","institution_ids":["https://openalex.org/I32574673"]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University , Harbin 150080, China","institution_ids":["https://openalex.org/I1300757298"]},{"raw_affiliation_string":"Department of Computer Science, Shantou University, Shantou, 515063, China","institution_ids":["https://openalex.org/I32574673"]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China","institution_ids":["https://openalex.org/I1300757298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072908486","display_name":"Jing Gu","orcid":"https://orcid.org/0009-0003-1172-9454"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Gu","raw_affiliation_strings":["School of Computer Science and Technology, Heilongjiang University , Harbin 150080, China","School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University , Harbin 150080, China","institution_ids":["https://openalex.org/I1300757298"]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China","institution_ids":["https://openalex.org/I1300757298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004971220","display_name":"Hui Cui","orcid":"https://orcid.org/0000-0001-8224-4698"},"institutions":[{"id":"https://openalex.org/I196829312","display_name":"La Trobe University","ror":"https://ror.org/01rxfrp27","country_code":"AU","type":"education","lineage":["https://openalex.org/I196829312"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Hui Cui","raw_affiliation_strings":["Department of Computer Science and Information Technology, La Trobe University , Melbourne, VIC 3083, Australia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Technology, La Trobe University , Melbourne, VIC 3083, Australia","institution_ids":["https://openalex.org/I196829312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100328365","display_name":"Shuai Wang","orcid":"https://orcid.org/0009-0003-1562-3198"},"institutions":[{"id":"https://openalex.org/I39333907","display_name":"Yanshan University","ror":"https://ror.org/02txfnf15","country_code":"CN","type":"education","lineage":["https://openalex.org/I39333907"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuai Wang","raw_affiliation_strings":["School of Information Science and Engineering, Yanshan University , Qinhuangdao 066004, China","School of Information Science and Engineering, Yanshan University, Qinhuangdao, 066004, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Yanshan University , Qinhuangdao 066004, China","institution_ids":["https://openalex.org/I39333907"]},{"raw_affiliation_string":"School of Information Science and Engineering, Yanshan University, Qinhuangdao, 066004, China","institution_ids":["https://openalex.org/I39333907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038644272","display_name":"Toshiya Nakaguchi","orcid":"https://orcid.org/0000-0002-8348-6178"},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]},{"id":"https://openalex.org/I4210162351","display_name":"Center for Forensic Mental Health, Chiba University","ror":"https://ror.org/05b0gpy83","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I159385669","https://openalex.org/I4210162351"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Nakaguchi Toshiya","raw_affiliation_strings":["Center for Frontier Medical Engineering, Chiba University , Chiba 2638522, Japan","Center for Frontier Medical Engineering, Chiba University, Chiba, 2638522, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Frontier Medical Engineering, Chiba University , Chiba 2638522, Japan","institution_ids":["https://openalex.org/I159385669","https://openalex.org/I4210162351"]},{"raw_affiliation_string":"Center for Frontier Medical Engineering, Chiba University, Chiba, 2638522, Japan","institution_ids":["https://openalex.org/I159385669"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101660672","display_name":"Cheng Liu","orcid":"https://orcid.org/0000-0002-7204-7030"},"institutions":[{"id":"https://openalex.org/I32574673","display_name":"Shantou University","ror":"https://ror.org/01a099706","country_code":"CN","type":"education","lineage":["https://openalex.org/I32574673"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cheng Liu","raw_affiliation_strings":["Department of Computer Science, Shantou University , Shantou 515063, China","Department of Computer Science, Shantou University, Shantou, 515063, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Shantou University , Shantou 515063, China","institution_ids":["https://openalex.org/I32574673"]},{"raw_affiliation_string":"Department of Computer Science, Shantou University, Shantou, 515063, China","institution_ids":["https://openalex.org/I32574673"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004963500","display_name":"Tiangang Zhang","orcid":"https://orcid.org/0000-0002-7528-3581"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]},{"id":"https://openalex.org/I55022517","display_name":"Heilongjiang University","ror":"https://ror.org/04zyhq975","country_code":"CN","type":"education","lineage":["https://openalex.org/I55022517"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tiangang Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Heilongjiang University , Harbin 150080, China","School of Mathematical Science, Heilongjiang University , Harbin 150080, China","School of Mathematical Science, Heilongjiang University, Harbin, 150080, China","School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University , Harbin 150080, China","institution_ids":["https://openalex.org/I1300757298"]},{"raw_affiliation_string":"School of Mathematical Science, Heilongjiang University , Harbin 150080, China","institution_ids":["https://openalex.org/I55022517"]},{"raw_affiliation_string":"School of Mathematical Science, Heilongjiang University, Harbin, 150080, China","institution_ids":["https://openalex.org/I55022517"]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China","institution_ids":["https://openalex.org/I1300757298"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5028616130"],"corresponding_institution_ids":["https://openalex.org/I1300757298","https://openalex.org/I32574673"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":6.0084,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.966851,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"40","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.6752367615699768},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6335840821266174},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.5803344249725342},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5372889041900635},{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.5218029022216797},{"id":"https://openalex.org/keywords/graph-embedding","display_name":"Graph embedding","score":0.5189132690429688},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.49742773175239563},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4212111830711365},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4037548899650574},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38585615158081055},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33431243896484375},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1894298493862152},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11344543099403381},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07869577407836914}],"concepts":[{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.6752367615699768},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6335840821266174},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.5803344249725342},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5372889041900635},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.5218029022216797},{"id":"https://openalex.org/C75564084","wikidata":"https://www.wikidata.org/wiki/Q5597085","display_name":"Graph embedding","level":3,"score":0.5189132690429688},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.49742773175239563},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4212111830711365},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4037548899650574},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38585615158081055},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33431243896484375},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1894298493862152},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11344543099403381},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07869577407836914},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btae025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae025","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae025/56412608/btae025.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38269610","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38269610","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10868329","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10868329","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10868329/pdf/btae025.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:doi:10.26181/25248148","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal contribution"},{"id":"pmh:oai:figshare.com:article/25248148","is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/Multi-scale_topology_and_position_feature_learning_and_relationship-aware_graph_reasoning_for_prediction_of_drug-related_microbes/25248148","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"doi:10.26181/25248148.v1","is_oa":true,"landing_page_url":"https://doi.org/10.26181/25248148.v1","pdf_url":null,"source":{"id":"https://openalex.org/S7407052018","display_name":"La Trobe University","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae025","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae025/56412608/btae025.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.7200000286102295}],"awards":[{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2476221792","display_name":null,"funder_award_id":"Heilongjiang","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4429004793","display_name":null,"funder_award_id":"62172143","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G4685021066","display_name":null,"funder_award_id":"62372282","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6259686466","display_name":null,"funder_award_id":"62172143","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6559325049","display_name":null,"funder_award_id":"LH2023F044","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G8504959210","display_name":null,"funder_award_id":"61972135","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323085","display_name":"Natural Science Foundation of Heilongjiang Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4391212305.pdf"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1944045095","https://openalex.org/W1964727525","https://openalex.org/W1966716734","https://openalex.org/W2087007556","https://openalex.org/W2096451472","https://openalex.org/W2290443280","https://openalex.org/W2410433087","https://openalex.org/W2555688177","https://openalex.org/W2599008211","https://openalex.org/W2612233607","https://openalex.org/W2619003628","https://openalex.org/W2769934873","https://openalex.org/W2771045365","https://openalex.org/W2901561937","https://openalex.org/W2903096015","https://openalex.org/W2948160364","https://openalex.org/W2954336462","https://openalex.org/W2958656260","https://openalex.org/W3004007042","https://openalex.org/W3030942202","https://openalex.org/W3037489518","https://openalex.org/W3093302577","https://openalex.org/W3116604690","https://openalex.org/W3192677404","https://openalex.org/W3206417123","https://openalex.org/W4221050837","https://openalex.org/W4226103310","https://openalex.org/W4281871249","https://openalex.org/W4283785215","https://openalex.org/W4292723103","https://openalex.org/W4297009086","https://openalex.org/W4307502334","https://openalex.org/W4309467503","https://openalex.org/W4312084649","https://openalex.org/W4318539234","https://openalex.org/W4318982906","https://openalex.org/W4381051893","https://openalex.org/W4384664737","https://openalex.org/W4386295460","https://openalex.org/W4388076232","https://openalex.org/W4388615774"],"related_works":["https://openalex.org/W2952115151","https://openalex.org/W3208297503","https://openalex.org/W2889153461","https://openalex.org/W3119773509","https://openalex.org/W2964117661","https://openalex.org/W4388405611","https://openalex.org/W2619127353","https://openalex.org/W4285218279","https://openalex.org/W3203147499","https://openalex.org/W2018870022"],"abstract_inverted_index":{"Source":[0],"codes":[1],"and":[2],"Supplementary":[3],"Material":[4],"are":[5],"available":[6],"at":[7],"https://github.com/pingxuan-hlju/NGMDA.":[8]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":7}],"updated_date":"2026-04-13T07:58:08.660418","created_date":"2025-10-10T00:00:00"}
