{"id":"https://openalex.org/W4391144737","doi":"https://doi.org/10.1093/bioinformatics/btae021","title":"Text mining for contexts and relationships in cancer genomics literature","display_name":"Text mining for contexts and relationships in cancer genomics literature","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4391144737","doi":"https://doi.org/10.1093/bioinformatics/btae021","pmid":"https://pubmed.ncbi.nlm.nih.gov/38258418"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btae021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae021","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae021/56334549/btae021.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae021/56334549/btae021.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078043302","display_name":"Charlotte Collins","orcid":"https://orcid.org/0000-0002-8715-9035"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Charlotte Collins","raw_affiliation_strings":["Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037754702","display_name":"Simon Baker","orcid":"https://orcid.org/0000-0002-0998-438X"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Simon Baker","raw_affiliation_strings":["Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040763607","display_name":"Jason P. Brown","orcid":null},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jason Brown","raw_affiliation_strings":["Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101412040","display_name":"Huiyuan Zheng","orcid":"https://orcid.org/0000-0003-1431-1590"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Huiyuan Zheng","raw_affiliation_strings":["Institute of Environmental Medicine, Karolinska Institutet , 171 77 Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Institute of Environmental Medicine, Karolinska Institutet , 171 77 Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101547087","display_name":"Adelyne Chan","orcid":"https://orcid.org/0000-0003-2214-0306"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I2801316944","display_name":"Cancer Research UK","ror":"https://ror.org/054225q67","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2801316944"]},{"id":"https://openalex.org/I4210089382","display_name":"Cancer Research UK Cambridge Center","ror":"https://ror.org/0068m0j38","country_code":"GB","type":"facility","lineage":["https://openalex.org/I241749","https://openalex.org/I2801316944","https://openalex.org/I4210089382"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Adelyne Chan","raw_affiliation_strings":["Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge , Cambridge CB2 0RE, United Kingdom","Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, CB2 0RE, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge , Cambridge CB2 0RE, United Kingdom","institution_ids":["https://openalex.org/I4210089382","https://openalex.org/I2801316944"]},{"raw_affiliation_string":"Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, CB2 0RE, United Kingdom","institution_ids":["https://openalex.org/I2801316944","https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036940014","display_name":"Ulla Stenius","orcid":null},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Ulla Stenius","raw_affiliation_strings":["Institute of Environmental Medicine, Karolinska Institutet , 171 77 Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Institute of Environmental Medicine, Karolinska Institutet , 171 77 Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086264006","display_name":"Masashi Narita","orcid":"https://orcid.org/0000-0001-7764-577X"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I2801316944","display_name":"Cancer Research UK","ror":"https://ror.org/054225q67","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2801316944"]},{"id":"https://openalex.org/I4210089382","display_name":"Cancer Research UK Cambridge Center","ror":"https://ror.org/0068m0j38","country_code":"GB","type":"facility","lineage":["https://openalex.org/I241749","https://openalex.org/I2801316944","https://openalex.org/I4210089382"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Masashi Narita","raw_affiliation_strings":["Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge , Cambridge CB2 0RE, United Kingdom","Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, CB2 0RE, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge , Cambridge CB2 0RE, United Kingdom","institution_ids":["https://openalex.org/I4210089382","https://openalex.org/I2801316944"]},{"raw_affiliation_string":"Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, CB2 0RE, United Kingdom","institution_ids":["https://openalex.org/I2801316944","https://openalex.org/I241749"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081393566","display_name":"Anna Korhonen","orcid":"https://orcid.org/0000-0002-3692-3144"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Anna Korhonen","raw_affiliation_strings":["Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Language Technology Laboratory, Theoretical and Applied Linguistics, Faculty of Modern and Medieval Languages and Linguistics, University of Cambridge , Cambridge CB3 9DA, United Kingdom","institution_ids":["https://openalex.org/I241749"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5078043302"],"corresponding_institution_ids":["https://openalex.org/I241749"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.9251,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.71967253,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"40","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.6628774404525757},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5083600878715515},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.49332132935523987},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.443726122379303},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43423986434936523},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33904629945755005},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3380899429321289},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.2949196994304657},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.27850914001464844},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.23636558651924133},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13240429759025574}],"concepts":[{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.6628774404525757},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5083600878715515},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.49332132935523987},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.443726122379303},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43423986434936523},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33904629945755005},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3380899429321289},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.2949196994304657},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.27850914001464844},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.23636558651924133},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13240429759025574}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1093/bioinformatics/btae021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae021","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae021/56334549/btae021.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38258418","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38258418","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10822582","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10822582","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10822582/pdf/btae021.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/363773","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/363773","pdf_url":"https://www.repository.cam.ac.uk/bitstreams/e450d9a7-ae91-4f18-8d53-e12a39e0d2b5/download","source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/363857","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/363857","pdf_url":"https://www.repository.cam.ac.uk/bitstreams/5b5078b0-c787-4129-bf53-ee1365835f2a/download","source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/363965","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/363965","pdf_url":"https://www.repository.cam.ac.uk/bitstreams/a0ba945d-f8b4-4ce6-b4b9-f4fa7b50a436/download","source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/364061","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/364061","pdf_url":"https://www.repository.cam.ac.uk/bitstreams/d013e544-a651-4b82-abd3-b6173dec86b6/download","source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.17863/cam.105637","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.105637","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btae021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btae021","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae021/56334549/btae021.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5199999809265137,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G1847806088","display_name":null,"funder_award_id":"A29580","funder_id":"https://openalex.org/F4320337195","funder_display_name":"Cancer Research UK Cambridge Institute, University of Cambridge"},{"id":"https://openalex.org/G2563943884","display_name":null,"funder_award_id":"C9545/A2958","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G4818343516","display_name":null,"funder_award_id":"A29580","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G5065826056","display_name":null,"funder_award_id":"65BX18MNIB","funder_id":"https://openalex.org/F4320331008","funder_display_name":"BIRAX"},{"id":"https://openalex.org/G5175749341","display_name":null,"funder_award_id":"65BX18MNIB","funder_id":"https://openalex.org/F4320320065","funder_display_name":"Diabetes UK"},{"id":"https://openalex.org/G5254625214","display_name":null,"funder_award_id":"29580","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G6066084515","display_name":"Generation of an In Vivo Senescent Cell Atlas: Across the life-course and in pathology","funder_award_id":"BB/T013486/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G63586632","display_name":null,"funder_award_id":"C9545","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G7182241528","display_name":null,"funder_award_id":"BB/T013486/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7669185616","display_name":null,"funder_award_id":"C9545/A29580","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G7675004503","display_name":"Genome stability established through epigenome plasticity during ageing and rejuvenation","funder_award_id":"BB/S013466/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G797072831","display_name":null,"funder_award_id":"C9545/A29580","funder_id":"https://openalex.org/F4320337195","funder_display_name":"Cancer Research UK Cambridge Institute, University of Cambridge"},{"id":"https://openalex.org/G804615899","display_name":null,"funder_award_id":"9545/A29580","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G8578289054","display_name":null,"funder_award_id":"65BX18MNIB","funder_id":"https://openalex.org/F4320320025","funder_display_name":"British Council"}],"funders":[{"id":"https://openalex.org/F4320314731","display_name":"UK Research and Innovation","ror":"https://ror.org/001aqnf71"},{"id":"https://openalex.org/F4320319985","display_name":"Cancer Research UK","ror":"https://ror.org/054225q67"},{"id":"https://openalex.org/F4320320025","display_name":"British Council","ror":"https://ror.org/00t3pr326"},{"id":"https://openalex.org/F4320320065","display_name":"Diabetes UK","ror":"https://ror.org/050rgn017"},{"id":"https://openalex.org/F4320331008","display_name":"BIRAX","ror":null},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320337195","display_name":"Cancer Research UK Cambridge Institute, University of Cambridge","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4391144737.pdf"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1505770165","https://openalex.org/W1894267660","https://openalex.org/W1985213868","https://openalex.org/W2032700869","https://openalex.org/W2044420612","https://openalex.org/W2052853635","https://openalex.org/W2081613128","https://openalex.org/W2103017472","https://openalex.org/W2105440823","https://openalex.org/W2125160887","https://openalex.org/W2127230663","https://openalex.org/W2168909179","https://openalex.org/W2174775663","https://openalex.org/W2345356016","https://openalex.org/W2561396377","https://openalex.org/W2736047977","https://openalex.org/W2749535755","https://openalex.org/W2788640168","https://openalex.org/W2794820058","https://openalex.org/W2808272687","https://openalex.org/W2896730986","https://openalex.org/W2911489562","https://openalex.org/W3033278232","https://openalex.org/W3094213757","https://openalex.org/W3127789712","https://openalex.org/W3128646645","https://openalex.org/W3136736537","https://openalex.org/W3200735940","https://openalex.org/W3203775359","https://openalex.org/W4205345044","https://openalex.org/W4221142212","https://openalex.org/W4281642792","https://openalex.org/W6661291917"],"related_works":["https://openalex.org/W2186113122","https://openalex.org/W1523310174","https://openalex.org/W2531913951","https://openalex.org/W2347127313","https://openalex.org/W4302381976","https://openalex.org/W4243634448","https://openalex.org/W4393095456","https://openalex.org/W1563588491","https://openalex.org/W4283831541","https://openalex.org/W2053972265"],"abstract_inverted_index":{"Code":[0],"and":[1],"data":[2],"are":[3],"available":[4],"here:":[5],"https://github.com/cambridgeltl/functional-genomics-ie.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
