{"id":"https://openalex.org/W4390742986","doi":"https://doi.org/10.1093/bioinformatics/btad757","title":"MK-BMC: a Multi-Kernel framework with Boosted distance metrics for Microbiome data for Classification","display_name":"MK-BMC: a Multi-Kernel framework with Boosted distance metrics for Microbiome data for Classification","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4390742986","doi":"https://doi.org/10.1093/bioinformatics/btad757","pmid":"https://pubmed.ncbi.nlm.nih.gov/38200571"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad757","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad757","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad757/55399604/btad757.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad757/55399604/btad757.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5104227154","display_name":"Huang Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]},{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Huang Xu","raw_affiliation_strings":["Department of Statistics and Finance, University of Science and Technology of China , Hefei 230026, China","Department of Statistics and Finance, University of Science and Technology of China, Hefei, 230026, China"],"affiliations":[{"raw_affiliation_string":"Department of Statistics and Finance, University of Science and Technology of China , Hefei 230026, China","institution_ids":["https://openalex.org/I126520041","https://openalex.org/I16365422"]},{"raw_affiliation_string":"Department of Statistics and Finance, University of Science and Technology of China, Hefei, 230026, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100428380","display_name":"Tian Wang","orcid":"https://orcid.org/0000-0001-7365-7423"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tian Wang","raw_affiliation_strings":["Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081613924","display_name":"Yuqi Miao","orcid":"https://orcid.org/0000-0002-3513-3685"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuqi Miao","raw_affiliation_strings":["Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086116641","display_name":"Min Qian","orcid":"https://orcid.org/0000-0003-1214-8830"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Min Qian","raw_affiliation_strings":["Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101520781","display_name":"Yaning Yang","orcid":"https://orcid.org/0000-0002-2671-1519"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]},{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaning Yang","raw_affiliation_strings":["Department of Statistics and Finance, University of Science and Technology of China , Hefei 230026, China","Department of Statistics and Finance, University of Science and Technology of China, Hefei, 230026, China"],"affiliations":[{"raw_affiliation_string":"Department of Statistics and Finance, University of Science and Technology of China , Hefei 230026, China","institution_ids":["https://openalex.org/I126520041","https://openalex.org/I16365422"]},{"raw_affiliation_string":"Department of Statistics and Finance, University of Science and Technology of China, Hefei, 230026, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100375568","display_name":"Shuang Wang","orcid":"https://orcid.org/0000-0002-1693-6888"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shuang Wang","raw_affiliation_strings":["Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Mailman School of Public Health, Columbia University , New York, NY 10032, United States","institution_ids":["https://openalex.org/I78577930"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5104227154"],"corresponding_institution_ids":["https://openalex.org/I126520041","https://openalex.org/I16365422"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.7084,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.67259499,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"40","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10866","display_name":"Nutritional Studies and Diet","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.9060039520263672},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.7198759913444519},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.5448992848396301},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5251731276512146},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5057220458984375},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.4605511724948883},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45759353041648865},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4380817413330078},{"id":"https://openalex.org/keywords/taxon","display_name":"Taxon","score":0.4327702522277832},{"id":"https://openalex.org/keywords/human-microbiome-project","display_name":"Human Microbiome Project","score":0.4138426184654236},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3613172471523285},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3431220054626465},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14411094784736633},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.11864203214645386}],"concepts":[{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.9060039520263672},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.7198759913444519},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.5448992848396301},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5251731276512146},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5057220458984375},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.4605511724948883},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45759353041648865},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4380817413330078},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.4327702522277832},{"id":"https://openalex.org/C190944805","wikidata":"https://www.wikidata.org/wiki/Q3922751","display_name":"Human Microbiome Project","level":4,"score":0.4138426184654236},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3613172471523285},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3431220054626465},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14411094784736633},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.11864203214645386},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btad757","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad757","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad757/55399604/btad757.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38200571","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38200571","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10789312","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10789312","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10789312/pdf/btad757.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad757","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad757","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad757/55399604/btad757.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4390742986.pdf"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W1516274582","https://openalex.org/W1703384511","https://openalex.org/W1811186957","https://openalex.org/W2023615726","https://openalex.org/W2031611770","https://openalex.org/W2037878492","https://openalex.org/W2051397417","https://openalex.org/W2067537975","https://openalex.org/W2072970694","https://openalex.org/W2105937617","https://openalex.org/W2128769815","https://openalex.org/W2130669817","https://openalex.org/W2133057705","https://openalex.org/W2135046866","https://openalex.org/W2143777796","https://openalex.org/W2145664556","https://openalex.org/W2147618390","https://openalex.org/W2149573313","https://openalex.org/W2170024099","https://openalex.org/W2247060185","https://openalex.org/W2307206101","https://openalex.org/W2324897069","https://openalex.org/W2340423564","https://openalex.org/W2395461901","https://openalex.org/W2403573949","https://openalex.org/W2609405928","https://openalex.org/W2672405828","https://openalex.org/W2784198355","https://openalex.org/W2794407684","https://openalex.org/W2810671429","https://openalex.org/W2911964244","https://openalex.org/W2917548494","https://openalex.org/W2949471597","https://openalex.org/W2972674777","https://openalex.org/W3016855559","https://openalex.org/W3024389658","https://openalex.org/W3024771599","https://openalex.org/W3028383715","https://openalex.org/W3199743232","https://openalex.org/W4224209549","https://openalex.org/W4226011853","https://openalex.org/W6758804334","https://openalex.org/W6777290838"],"related_works":["https://openalex.org/W1968369492","https://openalex.org/W2043102924","https://openalex.org/W2995607319","https://openalex.org/W2391004329","https://openalex.org/W2315403509","https://openalex.org/W2624135745","https://openalex.org/W2291217197","https://openalex.org/W2591857450","https://openalex.org/W2902943436","https://openalex.org/W1542636957"],"abstract_inverted_index":{"Source":[0],"code":[1],"together":[2],"with":[3],"a":[4],"sample":[5],"input":[6],"dataset":[7],"is":[8],"available":[9],"at":[10],"https://github.com/HXu06/MK-BMC.":[11]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-25T14:56:36.534964","created_date":"2025-10-10T00:00:00"}
