{"id":"https://openalex.org/W4389668991","doi":"https://doi.org/10.1093/bioinformatics/btad722","title":"Benchmarking and improving the performance of variant-calling pipelines with RecallME","display_name":"Benchmarking and improving the performance of variant-calling pipelines with RecallME","publication_year":2023,"publication_date":"2023-12-01","ids":{"openalex":"https://openalex.org/W4389668991","doi":"https://doi.org/10.1093/bioinformatics/btad722","pmid":"https://pubmed.ncbi.nlm.nih.gov/38092052"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad722","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad722","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad722/54408125/btad722.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad722/54408125/btad722.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071767031","display_name":"Gianluca Vozza","orcid":"https://orcid.org/0000-0003-3562-4457"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Gianluca Vozza","raw_affiliation_strings":["Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","Department of Oncology and Hematology-Oncology, Universit\u00e0 degli Studi di Milano , Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]},{"raw_affiliation_string":"Department of Oncology and Hematology-Oncology, Universit\u00e0 degli Studi di Milano , Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067067284","display_name":"Emanuele Bonetti","orcid":"https://orcid.org/0000-0001-7462-3874"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Emanuele Bonetti","raw_affiliation_strings":["Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","Department of Oncology and Hematology-Oncology, Universit\u00e0 degli Studi di Milano , Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]},{"raw_affiliation_string":"Department of Oncology and Hematology-Oncology, Universit\u00e0 degli Studi di Milano , Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020388851","display_name":"Giulia Tini","orcid":"https://orcid.org/0000-0002-2616-3962"},"institutions":[{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giulia Tini","raw_affiliation_strings":["Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000083750","display_name":"Valentina Favalli","orcid":"https://orcid.org/0000-0002-7058-6479"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Valentina Favalli","raw_affiliation_strings":["4bases SA , Manno, Ticino, Switzerland"],"affiliations":[{"raw_affiliation_string":"4bases SA , Manno, Ticino, Switzerland","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042704202","display_name":"Gianmaria Frig\u00e8","orcid":"https://orcid.org/0000-0003-3253-7091"},"institutions":[{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianmaria Frig\u00e8","raw_affiliation_strings":["Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054820276","display_name":"Gabriele Bucci","orcid":"https://orcid.org/0000-0001-9838-7204"},"institutions":[{"id":"https://openalex.org/I4210133214","display_name":"IRCCS Ospedale San Raffaele","ror":"https://ror.org/039zxt351","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210133214","https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gabriele Bucci","raw_affiliation_strings":["Center for Omics Sciences, IRCCS Ospedale San Raffaele , 20132 Milano, Italy"],"affiliations":[{"raw_affiliation_string":"Center for Omics Sciences, IRCCS Ospedale San Raffaele , 20132 Milano, Italy","institution_ids":["https://openalex.org/I4210133214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037048847","display_name":"Simona De Summa","orcid":"https://orcid.org/0000-0001-9607-3754"},"institutions":[{"id":"https://openalex.org/I4210131058","display_name":"Istituto Tumori Bari","ror":"https://ror.org/03jxkz251","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210099368","https://openalex.org/I4210117053","https://openalex.org/I4210131058","https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Simona De Summa","raw_affiliation_strings":["Molecular Diagnostics and Pharmacogenetics Unit, IRCCS Istituto Tumori, \u201cGiovanni Paolo II\u201d , Bari, Italy"],"affiliations":[{"raw_affiliation_string":"Molecular Diagnostics and Pharmacogenetics Unit, IRCCS Istituto Tumori, \u201cGiovanni Paolo II\u201d , Bari, Italy","institution_ids":["https://openalex.org/I4210131058","https://openalex.org/I4210153126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065468741","display_name":"Mario Zanfardino","orcid":"https://orcid.org/0000-0003-3733-2095"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mario Zanfardino","raw_affiliation_strings":["IRCCS Synlab SDN , 80143, Naples, Italy"],"affiliations":[{"raw_affiliation_string":"IRCCS Synlab SDN , 80143, Naples, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043033271","display_name":"Francesco Zapelloni","orcid":"https://orcid.org/0000-0001-9127-037X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Francesco Zapelloni","raw_affiliation_strings":["4bases SA , Manno, Ticino, Switzerland"],"affiliations":[{"raw_affiliation_string":"4bases SA , Manno, Ticino, Switzerland","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042037475","display_name":"Luca Mazzarella","orcid":"https://orcid.org/0000-0002-4043-3279"},"institutions":[{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luca Mazzarella","raw_affiliation_strings":["Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5071767031"],"corresponding_institution_ids":["https://openalex.org/I189158943","https://openalex.org/I6141010"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.26076514,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"39","issue":"12","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.7911196947097778},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.7727834582328796},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7410683631896973},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7141485810279846},{"id":"https://openalex.org/keywords/exome-sequencing","display_name":"Exome sequencing","score":0.6291873455047607},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5722452402114868},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5027964115142822},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4722442030906677},{"id":"https://openalex.org/keywords/exome","display_name":"Exome","score":0.4639403820037842},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.46095138788223267},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.44400957226753235},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.41496044397354126},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33537784218788147},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3102056384086609},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.15438047051429749},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.14894813299179077},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13416993618011475},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13309958577156067},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12931177020072937}],"concepts":[{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.7911196947097778},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.7727834582328796},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7410683631896973},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7141485810279846},{"id":"https://openalex.org/C16671776","wikidata":"https://www.wikidata.org/wiki/Q5420592","display_name":"Exome sequencing","level":4,"score":0.6291873455047607},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5722452402114868},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5027964115142822},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4722442030906677},{"id":"https://openalex.org/C10590036","wikidata":"https://www.wikidata.org/wiki/Q417664","display_name":"Exome","level":5,"score":0.4639403820037842},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.46095138788223267},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.44400957226753235},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.41496044397354126},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33537784218788147},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3102056384086609},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.15438047051429749},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.14894813299179077},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13416993618011475},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13309958577156067},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12931177020072937},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btad722","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad722","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad722/54408125/btad722.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38092052","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38092052","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10748785","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10748785","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10748785/pdf/btad722.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad722","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad722","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad722/54408125/btad722.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6399999856948853,"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10"}],"awards":[{"id":"https://openalex.org/G8429495935","display_name":null,"funder_award_id":"Ricerca_Corrente","funder_id":"https://openalex.org/F4320321781","funder_display_name":"Ministero della Salute"},{"id":"https://openalex.org/G850759575","display_name":null,"funder_award_id":"GR-2016-02361272","funder_id":"https://openalex.org/F4320321781","funder_display_name":"Ministero della Salute"}],"funders":[{"id":"https://openalex.org/F4320321781","display_name":"Ministero della Salute","ror":"https://ror.org/00789fa95"},{"id":"https://openalex.org/F4320332053","display_name":"Alleanza Contro il Cancro","ror":"https://ror.org/05y4mf750"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4389668991.pdf"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1903088142","https://openalex.org/W1919257374","https://openalex.org/W1964807436","https://openalex.org/W1984068087","https://openalex.org/W2102619694","https://openalex.org/W2119180969","https://openalex.org/W2119284644","https://openalex.org/W2168133698","https://openalex.org/W2883511460","https://openalex.org/W2929354011","https://openalex.org/W2951331911","https://openalex.org/W3017323551","https://openalex.org/W3131055609","https://openalex.org/W3186098271","https://openalex.org/W3196953684","https://openalex.org/W3208186059","https://openalex.org/W4225293672","https://openalex.org/W4320717604","https://openalex.org/W4323536313","https://openalex.org/W4376503896"],"related_works":["https://openalex.org/W2093932542","https://openalex.org/W2043256480","https://openalex.org/W2772505697","https://openalex.org/W3083501552","https://openalex.org/W2400191746","https://openalex.org/W1983406990","https://openalex.org/W2094815267","https://openalex.org/W2484239316","https://openalex.org/W3024198590","https://openalex.org/W4367844067"],"abstract_inverted_index":{"Source":[0],"code":[1],"is":[2,13],"freely":[3],"available":[4,14],"under":[5],"MIT":[6],"license":[7,24],"at":[8,15],"https://github.com/mazzalab-ieo/recallme.":[9],"RecallME":[10],"web":[11],"application":[12],"https://translational-oncology-lab.shinyapps.io/recallme/.":[16],"To":[17],"use":[18],"RecallME,":[19],"users":[20],"must":[21],"obtain":[22],"a":[23],"for":[25],"ANNOVAR":[26],"by":[27],"themselves.":[28]},"counts_by_year":[],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
