{"id":"https://openalex.org/W4387363064","doi":"https://doi.org/10.1093/bioinformatics/btad613","title":"SBILib: a handle for protein modeling and engineering","display_name":"SBILib: a handle for protein modeling and engineering","publication_year":2023,"publication_date":"2023-10-01","ids":{"openalex":"https://openalex.org/W4387363064","doi":"https://doi.org/10.1093/bioinformatics/btad613","pmid":"https://pubmed.ncbi.nlm.nih.gov/37796837"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad613","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad613","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad613/51893673/btad613.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad613/51893673/btad613.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024152315","display_name":"Patrick Gohl","orcid":"https://orcid.org/0009-0002-8879-912X"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Patrick Gohl","raw_affiliation_strings":["Department of Medicine and Life Sciences, SBI-GRIB, Universitat Pompeu Fabra , 08003 Barcelona, Catalonia, Spain","Department of Medicine and Life Sciences, (SBI-GRIB), Universitat Pompeu Fabra, Barcelona 08003, Catalonia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine and Life Sciences, SBI-GRIB, Universitat Pompeu Fabra , 08003 Barcelona, Catalonia, Spain","institution_ids":["https://openalex.org/I170486558"]},{"raw_affiliation_string":"Department of Medicine and Life Sciences, (SBI-GRIB), Universitat Pompeu Fabra, Barcelona 08003, Catalonia, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048998113","display_name":"Jaume Bonet","orcid":"https://orcid.org/0000-0001-5210-4387"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jaume Bonet","raw_affiliation_strings":["Department of Medicine and Life Sciences, SBI-GRIB, Universitat Pompeu Fabra , 08003 Barcelona, Catalonia, Spain","Department of Medicine and Life Sciences, (SBI-GRIB), Universitat Pompeu Fabra, Barcelona 08003, Catalonia, Spain"],"raw_orcid":"https://orcid.org/0000-0001-5210-4387","affiliations":[{"raw_affiliation_string":"Department of Medicine and Life Sciences, SBI-GRIB, Universitat Pompeu Fabra , 08003 Barcelona, Catalonia, Spain","institution_ids":["https://openalex.org/I170486558"]},{"raw_affiliation_string":"Department of Medicine and Life Sciences, (SBI-GRIB), Universitat Pompeu Fabra, Barcelona 08003, Catalonia, Spain","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065435409","display_name":"Oriol Forn\u00e9s","orcid":"https://orcid.org/0000-0002-5969-3054"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I4210153200","display_name":"BC Children's Hospital","ror":"https://ror.org/04n901w50","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I4210153200"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Oriol Fornes","raw_affiliation_strings":["Department of Medical Genetics, Centre for Molecular Medicine and Therapeutics, BC Children\u2019s Hospital Research Institute, University of British Columbia , Vancouver, BC V5Z 4H4, Canada"],"raw_orcid":"https://orcid.org/0000-0002-5969-3054","affiliations":[{"raw_affiliation_string":"Department of Medical Genetics, Centre for Molecular Medicine and Therapeutics, BC Children\u2019s Hospital Research Institute, University of British Columbia , Vancouver, BC V5Z 4H4, Canada","institution_ids":["https://openalex.org/I4210153200","https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081228191","display_name":"Joan Planas-Iglesias","orcid":"https://orcid.org/0000-0002-6279-2483"},"institutions":[{"id":"https://openalex.org/I21449261","display_name":"Masaryk University","ror":"https://ror.org/02j46qs45","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21449261"]},{"id":"https://openalex.org/I4210102302","display_name":"University Hospital Brno","ror":"https://ror.org/00qq1fp34","country_code":"CZ","type":"healthcare","lineage":["https://openalex.org/I4210102302"]},{"id":"https://openalex.org/I4210136987","display_name":"St. Anne's University Hospital Brno","ror":"https://ror.org/049bjee35","country_code":"CZ","type":"healthcare","lineage":["https://openalex.org/I4210136987"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Joan Planas-Iglesias","raw_affiliation_strings":["International Clinical Research Center, St Anne\u2019s University Hospital Brno , 656 916 Brno, Czech Republic","Loschmidt Laboratories, Department of Experimental Biology and RECETOX, Faculty of Science, Masaryk University , 625 00 Brno, Czech Republic"],"raw_orcid":"https://orcid.org/0000-0002-6279-2483","affiliations":[{"raw_affiliation_string":"International Clinical Research Center, St Anne\u2019s University Hospital Brno , 656 916 Brno, Czech Republic","institution_ids":["https://openalex.org/I4210102302","https://openalex.org/I4210136987"]},{"raw_affiliation_string":"Loschmidt Laboratories, Department of Experimental Biology and RECETOX, Faculty of Science, Masaryk University , 625 00 Brno, Czech Republic","institution_ids":["https://openalex.org/I21449261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090989775","display_name":"Narc\u00eds Fern\u00e1ndez\u2010Fuentes","orcid":"https://orcid.org/0000-0002-6421-1080"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Narc\u00eds Fernandez-Fuentes","raw_affiliation_strings":["Institute of Biological, Environmental and Rural Science, Aberystwyth University , Aberystwyth SY23 3DA, United Kingdom"],"raw_orcid":"https://orcid.org/0000-0002-6421-1080","affiliations":[{"raw_affiliation_string":"Institute of Biological, Environmental and Rural Science, Aberystwyth University , Aberystwyth SY23 3DA, United Kingdom","institution_ids":["https://openalex.org/I16038530"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111840557","display_name":"Baldo Oliva","orcid":null},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Baldo Oliva","raw_affiliation_strings":["Department of Medicine and Life Sciences, SBI-GRIB, Universitat Pompeu Fabra , 08003 Barcelona, Catalonia, Spain","Department of Medicine and Life Sciences, (SBI-GRIB), Universitat Pompeu Fabra, Barcelona 08003, Catalonia, Spain"],"raw_orcid":"https://orcid.org/0000-0003-0702-0250","affiliations":[{"raw_affiliation_string":"Department of Medicine and Life Sciences, SBI-GRIB, Universitat Pompeu Fabra , 08003 Barcelona, Catalonia, Spain","institution_ids":["https://openalex.org/I170486558"]},{"raw_affiliation_string":"Department of Medicine and Life Sciences, (SBI-GRIB), Universitat Pompeu Fabra, Barcelona 08003, Catalonia, Spain","institution_ids":["https://openalex.org/I170486558"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5024152315"],"corresponding_institution_ids":["https://openalex.org/I170486558"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.7458,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.72996428,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"39","issue":"10","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.7623000144958496,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.7623000144958496,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.10000000149011612,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.02370000071823597,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.8572216033935547},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7528709173202515},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.7348164319992065},{"id":"https://openalex.org/keywords/structural-bioinformatics","display_name":"Structural bioinformatics","score":0.49614986777305603},{"id":"https://openalex.org/keywords/file-format","display_name":"File format","score":0.46861276030540466},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.4296441376209259},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.4281645119190216},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3946462869644165},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.363244891166687},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.29991352558135986},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.18382641673088074},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1756269633769989},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.07499295473098755}],"concepts":[{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.8572216033935547},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7528709173202515},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.7348164319992065},{"id":"https://openalex.org/C69131567","wikidata":"https://www.wikidata.org/wiki/Q2068215","display_name":"Structural bioinformatics","level":3,"score":0.49614986777305603},{"id":"https://openalex.org/C97250363","wikidata":"https://www.wikidata.org/wiki/Q235557","display_name":"File format","level":2,"score":0.46861276030540466},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4296441376209259},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.4281645119190216},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3946462869644165},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.363244891166687},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.29991352558135986},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.18382641673088074},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1756269633769989},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.07499295473098755},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046911","descriptor_name":"Macromolecular Substances","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btad613","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad613","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad613/51893673/btad613.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37796837","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37796837","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:repositori-api.upf.edu:10230/58517","is_oa":true,"landing_page_url":"http://hdl.handle.net/10230/58517","pdf_url":"https://repositori.upf.edu/bitstreams/7c33d024-12a9-4dfd-8638-406756ad93d3/download","source":{"id":"https://openalex.org/S4306402615","display_name":"Repositori digital de la UPF (Universitat Pompeu Fabra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170486558","host_organization_name":"Universitat Pompeu Fabra","host_organization_lineage":["https://openalex.org/I170486558"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:10589914","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10589914","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10589914/pdf/btad613.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:is.muni.cz:2329677","is_oa":true,"landing_page_url":"https://is.muni.cz/publication/2329677","pdf_url":null,"source":{"id":"https://openalex.org/S4306400102","display_name":"Ve\u0159ejn\u00e9 slu\u017eby Informa\u010dn\u00edho syst\u00e9mu (Masarykiana Brunensis Universitas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad613","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad613","pdf_url":"https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad613/51893673/btad613.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1124535079","display_name":null,"funder_award_id":"CEX2018-000792-M","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2262748287","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2886542646","display_name":null,"funder_award_id":"PID2020-113203RB-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G300979063","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3480869486","display_name":null,"funder_award_id":"13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5080475149","display_name":null,"funder_award_id":"10.13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G7266728691","display_name":null,"funder_award_id":"13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4387363064.pdf"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W95014119","https://openalex.org/W230677038","https://openalex.org/W2008708467","https://openalex.org/W2025670719","https://openalex.org/W2066757437","https://openalex.org/W2075097399","https://openalex.org/W2101220662","https://openalex.org/W2114850508","https://openalex.org/W2126103104","https://openalex.org/W2127489230","https://openalex.org/W2130479394","https://openalex.org/W2141082242","https://openalex.org/W2142678478","https://openalex.org/W2166670554","https://openalex.org/W2167686614","https://openalex.org/W2170747616","https://openalex.org/W2952811294","https://openalex.org/W2980467043","https://openalex.org/W3003257820","https://openalex.org/W3004214328","https://openalex.org/W3008003211","https://openalex.org/W3035965352","https://openalex.org/W3049672568","https://openalex.org/W3087999493","https://openalex.org/W3099878876","https://openalex.org/W3103145119","https://openalex.org/W3118344282","https://openalex.org/W3140562424","https://openalex.org/W3168520514","https://openalex.org/W3211795435","https://openalex.org/W4242855320","https://openalex.org/W4255594044","https://openalex.org/W4379383636","https://openalex.org/W6652574002"],"related_works":["https://openalex.org/W3187193180","https://openalex.org/W106542691","https://openalex.org/W4287027380","https://openalex.org/W1699080303","https://openalex.org/W4297799326","https://openalex.org/W3116064965","https://openalex.org/W2897624483","https://openalex.org/W3193760048","https://openalex.org/W4285822516","https://openalex.org/W2950192635"],"abstract_inverted_index":{"SUMMARY:":[0],"The":[1,67],"SBILib":[2,31,107,123],"Python":[3],"library":[4,68],"provides":[5],"an":[6],"integrated":[7],"platform":[8],"for":[9,34,47],"the":[10,58,118],"analysis":[11,60],"of":[12,61,88,103],"macromolecular":[13,35,71],"structures":[14,63],"and":[15,23,40,56,64,82,90,95,112],"interactions.":[16],"It":[17,84],"combines":[18],"simple":[19],"3D":[20],"file":[21],"parsing":[22,89],"workup":[24],"methods":[25],"with":[26,50],"more":[27],"advanced":[28],"analytical":[29],"tools.":[30],"includes":[32],"modules":[33],"interactions,":[36],"loops,":[37],"super-secondary":[38,93],"structures,":[39],"biological":[41],"sequences,":[42],"as":[43,45],"well":[44],"wrappers":[46],"external":[48],"tools":[49],"which":[51,106],"to":[52,111,115],"integrate":[53],"their":[54,65],"results":[55],"facilitate":[57],"comparative":[59],"protein":[62,92],"complexes.":[66],"can":[69],"handle":[70],"complexes":[72],"formed":[73],"by":[74],"proteins":[75],"and/or":[76],"nucleic":[77],"acid":[78],"molecules":[79],"(i.e.":[80],"DNA":[81],"RNA).":[83],"is":[85,124],"uniquely":[86],"capable":[87],"calculating":[91],"structure":[94],"loop":[96],"geometry.":[97],"We":[98],"have":[99],"compiled":[100],"a":[101],"list":[102],"example":[104],"scenarios":[105],"may":[108],"be":[109],"applied":[110],"provided":[113],"access":[114],"these":[116],"within":[117],"library.":[119],"AVAILABILITY":[120],"AND":[121],"IMPLEMENTATION:":[122],"made":[125],"available":[126],"on":[127],"Github":[128],"at":[129],"https://github.com/structuralbioinformatics/SBILib.":[130]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
