{"id":"https://openalex.org/W4362657613","doi":"https://doi.org/10.1093/bioinformatics/btad166","title":"Modular response analysis reformulated as a multilinear regression problem","display_name":"Modular response analysis reformulated as a multilinear regression problem","publication_year":2023,"publication_date":"2023-04-01","ids":{"openalex":"https://openalex.org/W4362657613","doi":"https://doi.org/10.1093/bioinformatics/btad166","pmid":"https://pubmed.ncbi.nlm.nih.gov/37021935"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad166","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad166","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad166/49871516/btad166.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad166/49871516/btad166.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014776580","display_name":"Jean-Pierre Borg","orcid":"https://orcid.org/0009-0007-6193-1019"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I4210140335","display_name":"Institut de Recherche en Canc\u00e9rologie de Montpellier","ror":"https://ror.org/03capj968","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210140335","https://openalex.org/I4210141925","https://openalex.org/I4387154388"]},{"id":"https://openalex.org/I4387154388","display_name":"Institut Regional du Cancer de Montpellier","ror":"https://ror.org/02693j602","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210141925","https://openalex.org/I4387154388"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Pierre Borg","raw_affiliation_strings":["Institut de Recherche en Canc\u00e9rologie de Montpellier, Inserm U1194 , Montpellier 34298, France","Institut r\u00e9gional du Cancer Montpellier , Montpellier 34298, France","Universit\u00e9 de Montpellier , Montpellier 34090, France"],"affiliations":[{"raw_affiliation_string":"Institut de Recherche en Canc\u00e9rologie de Montpellier, Inserm U1194 , Montpellier 34298, France","institution_ids":["https://openalex.org/I4210140335","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Institut r\u00e9gional du Cancer Montpellier , Montpellier 34298, France","institution_ids":["https://openalex.org/I4210140335","https://openalex.org/I4387154388"]},{"raw_affiliation_string":"Universit\u00e9 de Montpellier , Montpellier 34090, France","institution_ids":["https://openalex.org/I19894307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029758467","display_name":"Jacques Colinge","orcid":"https://orcid.org/0000-0003-2466-4824"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I4210140335","display_name":"Institut de Recherche en Canc\u00e9rologie de Montpellier","ror":"https://ror.org/03capj968","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210140335","https://openalex.org/I4210141925","https://openalex.org/I4387154388"]},{"id":"https://openalex.org/I4387154388","display_name":"Institut Regional du Cancer de Montpellier","ror":"https://ror.org/02693j602","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210141925","https://openalex.org/I4387154388"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jacques Colinge","raw_affiliation_strings":["Facult\u00e9 de M\u00e9decine , Montpellier 34090, France","Institut de Recherche en Canc\u00e9rologie de Montpellier, Inserm U1194 , Montpellier 34298, France","Institut r\u00e9gional du Cancer Montpellier , Montpellier 34298, France","Universit\u00e9 de Montpellier , Montpellier 34090, France"],"affiliations":[{"raw_affiliation_string":"Facult\u00e9 de M\u00e9decine , Montpellier 34090, France","institution_ids":["https://openalex.org/I19894307"]},{"raw_affiliation_string":"Institut de Recherche en Canc\u00e9rologie de Montpellier, Inserm U1194 , Montpellier 34298, France","institution_ids":["https://openalex.org/I4210140335","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Institut r\u00e9gional du Cancer Montpellier , Montpellier 34298, France","institution_ids":["https://openalex.org/I4210140335","https://openalex.org/I4387154388"]},{"raw_affiliation_string":"Universit\u00e9 de Montpellier , Montpellier 34090, France","institution_ids":["https://openalex.org/I19894307"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013413507","display_name":"Patrice Ravel","orcid":"https://orcid.org/0000-0002-5752-7343"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]},{"id":"https://openalex.org/I4210140335","display_name":"Institut de Recherche en Canc\u00e9rologie de Montpellier","ror":"https://ror.org/03capj968","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210140335","https://openalex.org/I4210141925","https://openalex.org/I4387154388"]},{"id":"https://openalex.org/I4387154388","display_name":"Institut Regional du Cancer de Montpellier","ror":"https://ror.org/02693j602","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210141925","https://openalex.org/I4387154388"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Patrice Ravel","raw_affiliation_strings":["Facult\u00e9 de Pharmacie , Montpellier 34090, France","Institut de Recherche en Canc\u00e9rologie de Montpellier, Inserm U1194 , Montpellier 34298, France","Institut r\u00e9gional du Cancer Montpellier , Montpellier 34298, France","Universit\u00e9 de Montpellier , Montpellier 34090, France"],"affiliations":[{"raw_affiliation_string":"Facult\u00e9 de Pharmacie , Montpellier 34090, France","institution_ids":["https://openalex.org/I19894307"]},{"raw_affiliation_string":"Institut de Recherche en Canc\u00e9rologie de Montpellier, Inserm U1194 , Montpellier 34298, France","institution_ids":["https://openalex.org/I4210140335","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Institut r\u00e9gional du Cancer Montpellier , Montpellier 34298, France","institution_ids":["https://openalex.org/I4210140335","https://openalex.org/I4387154388"]},{"raw_affiliation_string":"Universit\u00e9 de Montpellier , Montpellier 34090, France","institution_ids":["https://openalex.org/I19894307"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5013413507"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I19894307","https://openalex.org/I4210140335","https://openalex.org/I4387154388"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":2583,"currency":"EUR","value_usd":2785},"fwci":0.6044,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.69137677,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"39","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multilinear-map","display_name":"Multilinear map","score":0.9141770601272583},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.7026715278625488},{"id":"https://openalex.org/keywords/perturbation","display_name":"Perturbation (astronomy)","score":0.6646272540092468},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6326115727424622},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.5510554313659668},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.5036110281944275},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.47688132524490356},{"id":"https://openalex.org/keywords/regression-analysis","display_name":"Regression analysis","score":0.46417710185050964},{"id":"https://openalex.org/keywords/linear-regression","display_name":"Linear regression","score":0.4550418257713318},{"id":"https://openalex.org/keywords/confidence-interval","display_name":"Confidence interval","score":0.4229358732700348},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3566588759422302},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3510212004184723},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.26309821009635925},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.22250258922576904},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21928620338439941},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.18304038047790527}],"concepts":[{"id":"https://openalex.org/C84392682","wikidata":"https://www.wikidata.org/wiki/Q1952404","display_name":"Multilinear map","level":2,"score":0.9141770601272583},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.7026715278625488},{"id":"https://openalex.org/C177918212","wikidata":"https://www.wikidata.org/wiki/Q803623","display_name":"Perturbation (astronomy)","level":2,"score":0.6646272540092468},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6326115727424622},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.5510554313659668},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.5036110281944275},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.47688132524490356},{"id":"https://openalex.org/C152877465","wikidata":"https://www.wikidata.org/wiki/Q208042","display_name":"Regression analysis","level":2,"score":0.46417710185050964},{"id":"https://openalex.org/C48921125","wikidata":"https://www.wikidata.org/wiki/Q10861030","display_name":"Linear regression","level":2,"score":0.4550418257713318},{"id":"https://openalex.org/C44249647","wikidata":"https://www.wikidata.org/wiki/Q208498","display_name":"Confidence interval","level":2,"score":0.4229358732700348},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3566588759422302},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3510212004184723},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.26309821009635925},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.22250258922576904},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21928620338439941},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.18304038047790527},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btad166","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad166","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad166/49871516/btad166.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37021935","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37021935","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-04779962v1","is_oa":true,"landing_page_url":"https://hal.science/hal-04779962","pdf_url":"https://hal.science/hal-04779962/document","source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2023, 39 (4), &#x27E8;10.1093/bioinformatics/btad166&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:10097436","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10097436","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10097436/pdf/btad166.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad166","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad166","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad166/49871516/btad166.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323831","display_name":"Universit\u00e9 de Lausanne","ror":"https://ror.org/019whta54"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4362657613.pdf"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W2001431571","https://openalex.org/W2034188706","https://openalex.org/W2044525257","https://openalex.org/W2121695897","https://openalex.org/W2139439234","https://openalex.org/W2161868542","https://openalex.org/W2163296115","https://openalex.org/W2169438035","https://openalex.org/W2555338931","https://openalex.org/W2626108736","https://openalex.org/W2787894218","https://openalex.org/W2793399117","https://openalex.org/W2808879853","https://openalex.org/W2897069326","https://openalex.org/W2898373440","https://openalex.org/W3024161231","https://openalex.org/W3099289621","https://openalex.org/W3148252621","https://openalex.org/W4225328348"],"related_works":["https://openalex.org/W4318719034","https://openalex.org/W37958683","https://openalex.org/W1999178348","https://openalex.org/W2396820687","https://openalex.org/W4295021234","https://openalex.org/W31220157","https://openalex.org/W2288557197","https://openalex.org/W4233024177","https://openalex.org/W2101914902","https://openalex.org/W3174613421"],"abstract_inverted_index":{"The":[0],"R":[1],"code":[2],"used":[3],"to":[4],"obtain":[5],"the":[6],"presented":[7],"results":[8],"is":[9],"available":[10],"from":[11],"GitHub:":[12],"https://github.com/J-P-Borg/BioInformatics.":[13]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-17T18:11:37.981687","created_date":"2025-10-10T00:00:00"}
