{"id":"https://openalex.org/W3154326799","doi":"https://doi.org/10.1093/bioinformatics/btad164","title":"mlf-core: a framework for deterministic machine learning","display_name":"mlf-core: a framework for deterministic machine learning","publication_year":2023,"publication_date":"2023-04-01","ids":{"openalex":"https://openalex.org/W3154326799","doi":"https://doi.org/10.1093/bioinformatics/btad164","mag":"3154326799","pmid":"https://pubmed.ncbi.nlm.nih.gov/37004171"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad164","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad164","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad164/49852154/btad164.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad164/49852154/btad164.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004135261","display_name":"Lukas Heumos","orcid":"https://orcid.org/0000-0002-8937-3457"},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I4210129183","display_name":"German Center for Lung Research","ror":"https://ror.org/03dx11k66","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210129183","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Lukas Heumos","raw_affiliation_strings":["Institute of Computational Biology, Helmholtz Zentrum M\u00fcnchen , Munich 85764, Germany","Institute of Lung Biology and Disease and Comprehensive Pneumology Center, Helmholtz Zentrum M\u00fcnchen, Member of the German Center for Lung Research (DZL) , Munich 81377, Germany","Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","TUM School of Life Sciences Weihenstephan, Technical University of Munich , Freising 85354, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Biology, Helmholtz Zentrum M\u00fcnchen , Munich 85764, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"Institute of Lung Biology and Disease and Comprehensive Pneumology Center, Helmholtz Zentrum M\u00fcnchen, Member of the German Center for Lung Research (DZL) , Munich 81377, Germany","institution_ids":["https://openalex.org/I4210129183","https://openalex.org/I3018134672"]},{"raw_affiliation_string":"Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"TUM School of Life Sciences Weihenstephan, Technical University of Munich , Freising 85354, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032550353","display_name":"Philipp Ehmele","orcid":"https://orcid.org/0000-0001-5945-7839"},"institutions":[{"id":"https://openalex.org/I159176309","display_name":"Universit\u00e4t Hamburg","ror":"https://ror.org/00g30e956","country_code":"DE","type":"education","lineage":["https://openalex.org/I159176309"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philipp Ehmele","raw_affiliation_strings":["Department of Informatics, University of Hamburg , Hamburg 20146, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, University of Hamburg , Hamburg 20146, Germany","institution_ids":["https://openalex.org/I159176309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070338828","display_name":"Luis Kuhn Cuellar","orcid":"https://orcid.org/0000-0002-6950-6929"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Luis Kuhn Cuellar","raw_affiliation_strings":["Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany"],"raw_orcid":"https://orcid.org/0000-0002-6950-6929","affiliations":[{"raw_affiliation_string":"Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039029030","display_name":"Kevin Menden","orcid":"https://orcid.org/0000-0002-5228-985X"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Kevin Menden","raw_affiliation_strings":["Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062744214","display_name":"E. Miller","orcid":"https://orcid.org/0000-0002-2398-0334"},"institutions":[{"id":"https://openalex.org/I162577319","display_name":"The University of Texas at Dallas","ror":"https://ror.org/049emcs32","country_code":"US","type":"education","lineage":["https://openalex.org/I162577319"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Edmund Miller","raw_affiliation_strings":["Department of Biological Sciences and Center for Systems Biology, The University of Texas at Dallas , Richardson, TX 75205, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences and Center for Systems Biology, The University of Texas at Dallas , Richardson, TX 75205, United States","institution_ids":["https://openalex.org/I162577319","https://openalex.org/I4210155419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101839682","display_name":"Steffen Lemke","orcid":"https://orcid.org/0000-0001-5807-2865"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steffen Lemke","raw_affiliation_strings":["Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062582778","display_name":"Gisela Gabernet","orcid":"https://orcid.org/0000-0001-7049-9474"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Gisela Gabernet","raw_affiliation_strings":["Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany"],"raw_orcid":"https://orcid.org/0000-0001-7049-9474","affiliations":[{"raw_affiliation_string":"Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008496386","display_name":"Sven Nahnsen","orcid":"https://orcid.org/0000-0002-4375-0691"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Sven Nahnsen","raw_affiliation_strings":["Biomedical Data Science, Department for Computer Science, Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72074, Germany","Faculty of Medicine, Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72016, Germany","Institute of Bioinformatics and Medical Informatics, Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72074, Germany","Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Data Science, Department for Computer Science, Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72074, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"Faculty of Medicine, Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72016, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"Institute of Bioinformatics and Medical Informatics, Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72074, Germany","institution_ids":["https://openalex.org/I8087733"]},{"raw_affiliation_string":"Quantitative Biology Center (QBiC), Eberhard Karls University of T\u00fcbingen , T\u00fcbingen 72076, Germany","institution_ids":["https://openalex.org/I8087733"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5004135261","https://openalex.org/A5008496386","https://openalex.org/A5062582778"],"corresponding_institution_ids":["https://openalex.org/I3018134672","https://openalex.org/I4210129183","https://openalex.org/I62916508","https://openalex.org/I8087733"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.3038,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.79453921,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"39","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.5212000012397766,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.5212000012397766,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.1518000066280365,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.01810000091791153,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7716857194900513},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.7129766941070557},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.687897264957428},{"id":"https://openalex.org/keywords/nondeterministic-algorithm","display_name":"Nondeterministic algorithm","score":0.5147969126701355},{"id":"https://openalex.org/keywords/core","display_name":"Core (optical fiber)","score":0.47408950328826904},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33039674162864685}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7716857194900513},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.7129766941070557},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.687897264957428},{"id":"https://openalex.org/C176181172","wikidata":"https://www.wikidata.org/wiki/Q3490301","display_name":"Nondeterministic algorithm","level":2,"score":0.5147969126701355},{"id":"https://openalex.org/C2164484","wikidata":"https://www.wikidata.org/wiki/Q5170150","display_name":"Core (optical fiber)","level":2,"score":0.47408950328826904},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33039674162864685},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btad164","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad164","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad164/49852154/btad164.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37004171","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37004171","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10089676","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10089676","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10089676/pdf/btad164.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:push-zb.helmholtz-munich.de:67638","is_oa":true,"landing_page_url":"https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=67638","pdf_url":null,"source":{"id":"https://openalex.org/S7407055352","display_name":"PuSH - Publication Server of Helmholtz Zentrum M\u00fcnchen","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics 39:8 (2023)","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad164","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad164","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad164/49852154/btad164.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1147967356","display_name":null,"funder_award_id":"031A533A","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G1159569226","display_name":null,"funder_award_id":"031A534A","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G1254183670","display_name":null,"funder_award_id":"031A538A","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G1883408951","display_name":null,"funder_award_id":"EXC 2180-390900677","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G2036822895","display_name":null,"funder_award_id":"EXC 2124","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G4771072336","display_name":null,"funder_award_id":"390838134","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G4949734291","display_name":null,"funder_award_id":"TRR 261","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6303721240","display_name":null,"funder_award_id":"031A535A","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G6418569106","display_name":null,"funder_award_id":"031A532B","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G6557565170","display_name":null,"funder_award_id":"031A537B","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G670955769","display_name":null,"funder_award_id":"EXC 2180","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7329970624","display_name":null,"funder_award_id":"398967434","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7346023294","display_name":null,"funder_award_id":"SFB/TR 209","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8377217958","display_name":null,"funder_award_id":"031A533B","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G8953674659","display_name":null,"funder_award_id":"031A537C","funder_id":"https://openalex.org/F4320330124","funder_display_name":"German Network for Bioinformatics Infrastructure"},{"id":"https://openalex.org/G932901508","display_name":null,"funder_award_id":"390900677","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320308737","display_name":"Facebook","ror":"https://ror.org/01zbnvs85"},{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320330124","display_name":"German Network for Bioinformatics Infrastructure","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1901129140","https://openalex.org/W1901616594","https://openalex.org/W1981276685","https://openalex.org/W2006041438","https://openalex.org/W2019607817","https://openalex.org/W2116091691","https://openalex.org/W2116660956","https://openalex.org/W2137052325","https://openalex.org/W2153431772","https://openalex.org/W2159482845","https://openalex.org/W2182214061","https://openalex.org/W2283438976","https://openalex.org/W2296335794","https://openalex.org/W2302501749","https://openalex.org/W2329907145","https://openalex.org/W2384100668","https://openalex.org/W2464708700","https://openalex.org/W2542459869","https://openalex.org/W2556862623","https://openalex.org/W2606715885","https://openalex.org/W2735984040","https://openalex.org/W2767394894","https://openalex.org/W2786672974","https://openalex.org/W2787225861","https://openalex.org/W2789894922","https://openalex.org/W2794574704","https://openalex.org/W2796033668","https://openalex.org/W2809499620","https://openalex.org/W2884561390","https://openalex.org/W2890735789","https://openalex.org/W2897666251","https://openalex.org/W2899279931","https://openalex.org/W2910094941","https://openalex.org/W2910683834","https://openalex.org/W2915554894","https://openalex.org/W2951381561","https://openalex.org/W2965552103","https://openalex.org/W2970971581","https://openalex.org/W3001485171","https://openalex.org/W3006653136","https://openalex.org/W3008058947","https://openalex.org/W3013294478","https://openalex.org/W3022819523","https://openalex.org/W3041643290","https://openalex.org/W3083804794","https://openalex.org/W3092775028","https://openalex.org/W3116112801","https://openalex.org/W3194575560","https://openalex.org/W3197433610","https://openalex.org/W3207554858","https://openalex.org/W4399757462","https://openalex.org/W6697144307","https://openalex.org/W6702252451","https://openalex.org/W6758038274"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W4286629047","https://openalex.org/W3046775127","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W4313488044","https://openalex.org/W3107602296","https://openalex.org/W3209574120","https://openalex.org/W4312192474"],"abstract_inverted_index":{"MOTIVATION:":[0],"Machine":[1],"learning":[2,46,62,95,108],"has":[3],"shown":[4],"extensive":[5],"growth":[6],"in":[7,123,140],"recent":[8],"years":[9],"and":[10,80,96,112,144,170],"is":[11,36],"now":[12],"routinely":[13],"applied":[14,117],"to":[15,49,67,110,119],"sensitive":[16],"areas.":[17],"To":[18],"allow":[19],"appropriate":[20],"verification":[21],"of":[22,52,75,90,166],"predictive":[23],"models":[24,27,122,173],"before":[25],"deployment,":[26],"must":[28],"be":[29],"deterministic.":[30],"Solely":[31],"fixing":[32],"all":[33],"random":[34],"seeds":[35],"not":[37],"sufficient":[38],"for":[39,92,137],"deterministic":[40,65,93,121],"machine":[41,45,61,94,107],"learning,":[42],"as":[43],"major":[44],"libraries":[47,63],"default":[48],"the":[50,68,73,102,164,167],"usage":[51],"nondeterministic":[53,69],"algorithms":[54,77],"based":[55,149],"on":[56,78,83,150],"atomic":[57],"operations.":[58],"RESULTS:":[59],"Various":[60],"released":[64],"counterparts":[66],"algorithms.":[70],"We":[71,116],"evaluated":[72],"effect":[74],"these":[76,84,114],"determinism":[79],"runtime.":[81],"Based":[82],"results,":[85],"we":[86],"formulated":[87],"a":[88,98,128,133,145],"set":[89],"requirements":[91],"developed":[97],"new":[99],"software":[100],"solution,":[101],"mlf-core":[103,118,168],"ecosystem,":[104],"which":[105],"aids":[106],"projects":[109],"meet":[111],"keep":[113],"requirements.":[115],"develop":[120],"various":[124],"biomedical":[125],"fields":[126],"including":[127],"single-cell":[129],"autoencoder":[130],"with":[131,154,163],"TensorFlow,":[132],"PyTorch-based":[134],"U-Net":[135],"model":[136],"liver-tumor":[138],"segmentation":[139],"computed":[141],"tomography":[142],"scans,":[143],"liver":[146],"cancer":[147],"classifier":[148],"gene":[151],"expression":[152],"profiles":[153],"XGBoost.":[155],"AVAILABILITY":[156],"AND":[157],"IMPLEMENTATION:":[158],"The":[159],"complete":[160],"data":[161],"together":[162],"implementations":[165],"ecosystem":[169],"use":[171],"case":[172],"are":[174],"available":[175],"at":[176],"https://github.com/mlf-core.":[177]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2}],"updated_date":"2026-05-27T09:02:27.158192","created_date":"2025-10-10T00:00:00"}
