{"id":"https://openalex.org/W4362505800","doi":"https://doi.org/10.1093/bioinformatics/btad125","title":"PreTP-2L: identification of therapeutic peptides and their types using two-layer ensemble learning framework","display_name":"PreTP-2L: identification of therapeutic peptides and their types using two-layer ensemble learning framework","publication_year":2023,"publication_date":"2023-04-01","ids":{"openalex":"https://openalex.org/W4362505800","doi":"https://doi.org/10.1093/bioinformatics/btad125","pmid":"https://pubmed.ncbi.nlm.nih.gov/37010503"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad125","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad125","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad125/49772096/btad125.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad125/49772096/btad125.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101667939","display_name":"Ke Yan","orcid":"https://orcid.org/0000-0002-5326-4267"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ke Yan","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101989488","display_name":"Yichen Guo","orcid":"https://orcid.org/0000-0002-9987-8942"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yichen Guo","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100395591","display_name":"Bin Liu","orcid":"https://orcid.org/0000-0003-3685-9469"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bin Liu","raw_affiliation_strings":["Advanced Research Institute of Multidisciplinary Science, Beijing Institute of Technology , Beijing 100081, China","School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"affiliations":[{"raw_affiliation_string":"Advanced Research Institute of Multidisciplinary Science, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]},{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100395591"],"corresponding_institution_ids":["https://openalex.org/I125839683"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":4.5266,"has_fulltext":true,"cited_by_count":30,"citation_normalized_percentile":{"value":0.95108728,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"39","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7040184736251831},{"id":"https://openalex.org/keywords/therapeutic-approach","display_name":"Therapeutic approach","score":0.6123809814453125},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5996060371398926},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.5596628189086914},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5167352557182312},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4910564422607422},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4245259165763855},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4073999524116516},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33015626668930054},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2808877229690552},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17083638906478882},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12179890275001526},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08712399005889893}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7040184736251831},{"id":"https://openalex.org/C2778384578","wikidata":"https://www.wikidata.org/wiki/Q16930687","display_name":"Therapeutic approach","level":3,"score":0.6123809814453125},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5996060371398926},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.5596628189086914},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5167352557182312},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4910564422607422},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4245259165763855},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4073999524116516},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33015626668930054},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2808877229690552},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17083638906478882},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12179890275001526},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08712399005889893},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btad125","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad125","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad125/49772096/btad125.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37010503","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37010503","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10076046","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10076046","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10076046/pdf/btad125.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad125","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad125","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/4/btad125/49772096/btad125.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3267686570","display_name":null,"funder_award_id":"62102030","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7894669521","display_name":null,"funder_award_id":"U22A2039","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4362505800.pdf"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W1854791334","https://openalex.org/W1931581539","https://openalex.org/W1969191557","https://openalex.org/W2005393061","https://openalex.org/W2038681300","https://openalex.org/W2058833671","https://openalex.org/W2062296203","https://openalex.org/W2070980386","https://openalex.org/W2083416546","https://openalex.org/W2097834518","https://openalex.org/W2120773774","https://openalex.org/W2132402247","https://openalex.org/W2143210482","https://openalex.org/W2145374174","https://openalex.org/W2156125289","https://openalex.org/W2158714788","https://openalex.org/W2161062388","https://openalex.org/W2162891889","https://openalex.org/W2547875792","https://openalex.org/W2568893370","https://openalex.org/W2608969085","https://openalex.org/W2620094535","https://openalex.org/W2772495191","https://openalex.org/W2778179010","https://openalex.org/W2782148675","https://openalex.org/W2792643794","https://openalex.org/W2794956775","https://openalex.org/W2806146459","https://openalex.org/W2891290193","https://openalex.org/W2911964244","https://openalex.org/W2936599975","https://openalex.org/W2964338223","https://openalex.org/W2965128681","https://openalex.org/W2969878814","https://openalex.org/W2987660980","https://openalex.org/W2989500256","https://openalex.org/W2994989159","https://openalex.org/W2997604048","https://openalex.org/W2999580270","https://openalex.org/W3017630416","https://openalex.org/W3048086963","https://openalex.org/W3086768476","https://openalex.org/W3097405028","https://openalex.org/W3140854437","https://openalex.org/W3143156272","https://openalex.org/W3159193120","https://openalex.org/W3160988990","https://openalex.org/W3179235883","https://openalex.org/W3196936178","https://openalex.org/W3199970975","https://openalex.org/W3203741962","https://openalex.org/W4225665657","https://openalex.org/W4229021228","https://openalex.org/W4256261874","https://openalex.org/W4282962464","https://openalex.org/W4308370073","https://openalex.org/W6683952830","https://openalex.org/W6747195478","https://openalex.org/W6748763805","https://openalex.org/W6754812645","https://openalex.org/W6838894984","https://openalex.org/W7073963285"],"related_works":["https://openalex.org/W1526195401","https://openalex.org/W2898732673","https://openalex.org/W4313385292","https://openalex.org/W1759461029","https://openalex.org/W2410053581","https://openalex.org/W2383658677","https://openalex.org/W3123203398","https://openalex.org/W2126989399","https://openalex.org/W2372019020","https://openalex.org/W3025605341"],"abstract_inverted_index":{"A":[0],"user-friendly":[1],"webserver":[2],"PreTP-2L":[3],"can":[4],"be":[5],"accessed":[6],"at":[7],"http://bliulab.net/PreTP-2L.":[8]},"counts_by_year":[{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":16},{"year":2023,"cited_by_count":5}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
