{"id":"https://openalex.org/W4317538661","doi":"https://doi.org/10.1093/bioinformatics/btad041","title":"NGSNGS: next-generation simulator for next-generation sequencing data","display_name":"NGSNGS: next-generation simulator for next-generation sequencing data","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4317538661","doi":"https://doi.org/10.1093/bioinformatics/btad041","pmid":"https://pubmed.ncbi.nlm.nih.gov/36661298"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad041","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad041","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad041/49030524/btad041.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad041/49030524/btad041.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006605808","display_name":"Rasmus Amund Henriksen","orcid":"https://orcid.org/0000-0003-3657-1983"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Rasmus Amund Henriksen","raw_affiliation_strings":["Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen , 1350 Copenhagen K, Denmark"],"affiliations":[{"raw_affiliation_string":"Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen , 1350 Copenhagen K, Denmark","institution_ids":["https://openalex.org/I4210127817","https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042644835","display_name":"Lei Zhao","orcid":"https://orcid.org/0000-0002-6551-2707"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Lei Zhao","raw_affiliation_strings":["Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen , 1350 Copenhagen K, Denmark"],"affiliations":[{"raw_affiliation_string":"Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen , 1350 Copenhagen K, Denmark","institution_ids":["https://openalex.org/I4210127817","https://openalex.org/I124055696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090964821","display_name":"Thorfinn Sand Korneliussen","orcid":"https://orcid.org/0000-0001-7576-5380"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Thorfinn Sand Korneliussen","raw_affiliation_strings":["Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen , 1350 Copenhagen K, Denmark"],"affiliations":[{"raw_affiliation_string":"Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen , 1350 Copenhagen K, Denmark","institution_ids":["https://openalex.org/I4210127817","https://openalex.org/I124055696"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5006605808","https://openalex.org/A5090964821"],"corresponding_institution_ids":["https://openalex.org/I124055696","https://openalex.org/I4210127817"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.502,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.92824603,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"39","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9817000031471252,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7245277762413025},{"id":"https://openalex.org/keywords/simulation","display_name":"Simulation","score":0.3200805187225342}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7245277762413025},{"id":"https://openalex.org/C44154836","wikidata":"https://www.wikidata.org/wiki/Q45045","display_name":"Simulation","level":1,"score":0.3200805187225342}],"mesh":[{"descriptor_ui":"D000072441","descriptor_name":"DNA, Ancient","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072441","descriptor_name":"DNA, Ancient","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072441","descriptor_name":"DNA, Ancient","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btad041","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad041","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad041/49030524/btad041.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36661298","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36661298","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9891242","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9891242","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9891242/pdf/btad041.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/a1212a43-70e3-4472-95bd-86a3e54fa181","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/a1212a43-70e3-4472-95bd-86a3e54fa181","pdf_url":"https://curis.ku.dk/ws/files/336529714/btad041.pdf","source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Henriksen , R A , Zhao , L & Korneliussen , T S 2023 , ' NGSNGS : next-generation simulator for next-generation sequencing data ' , Bioinformatics , vol. 39 , no. 1 , btad041 . https://doi.org/10.1093/bioinformatics/btad041","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad041","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad041","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad041/49030524/btad041.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2558956044","display_name":null,"funder_award_id":"R302-2018-2155","funder_id":"https://openalex.org/F4320321999","funder_display_name":"Lundbeckfonden"},{"id":"https://openalex.org/G5639662760","display_name":null,"funder_award_id":"Fellowship","funder_id":"https://openalex.org/F4320321999","funder_display_name":"Lundbeckfonden"}],"funders":[{"id":"https://openalex.org/F4320321999","display_name":"Lundbeckfonden","ror":"https://ror.org/03hz8wd80"},{"id":"https://openalex.org/F4320327918","display_name":"H. Lundbeck A/S","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4317538661.pdf"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1964350046","https://openalex.org/W2111310368","https://openalex.org/W2124031503","https://openalex.org/W2150163641","https://openalex.org/W2156330112","https://openalex.org/W2157539385","https://openalex.org/W2544029679","https://openalex.org/W3129075539","https://openalex.org/W3137279194"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
