{"id":"https://openalex.org/W4313437202","doi":"https://doi.org/10.1093/bioinformatics/btad001","title":"A Boolean algebra for genetic variants","display_name":"A Boolean algebra for genetic variants","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4313437202","doi":"https://doi.org/10.1093/bioinformatics/btad001","pmid":"https://pubmed.ncbi.nlm.nih.gov/36594541"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btad001","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad001","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad001/48909273/btad001.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad001/48909273/btad001.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062394749","display_name":"Jonathan K. Vis","orcid":"https://orcid.org/0000-0002-5815-9116"},"institutions":[{"id":"https://openalex.org/I2800006345","display_name":"Leiden University Medical Center","ror":"https://ror.org/05xvt9f17","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2800006345"]},{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Jonathan K Vis","raw_affiliation_strings":["Department of Human Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","Leiden Institute of Advanced Computer Science, Leiden University , 2333 CA Leiden, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Human Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","institution_ids":["https://openalex.org/I2800006345"]},{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Leiden University , 2333 CA Leiden, The Netherlands","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000643006","display_name":"Mark A Santcroos","orcid":"https://orcid.org/0000-0001-8414-2548"},"institutions":[{"id":"https://openalex.org/I2800006345","display_name":"Leiden University Medical Center","ror":"https://ror.org/05xvt9f17","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2800006345"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Mark A Santcroos","raw_affiliation_strings":["Department of Clinical Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","Department of Human Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Clinical Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","institution_ids":["https://openalex.org/I2800006345"]},{"raw_affiliation_string":"Department of Human Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","institution_ids":["https://openalex.org/I2800006345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054569164","display_name":"Walter A. Kosters","orcid":"https://orcid.org/0000-0001-8860-0390"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Walter A Kosters","raw_affiliation_strings":["Leiden Institute of Advanced Computer Science, Leiden University , 2333 CA Leiden, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Leiden University , 2333 CA Leiden, The Netherlands","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001355447","display_name":"Jeroen F. J. Laros","orcid":"https://orcid.org/0000-0002-8715-7371"},"institutions":[{"id":"https://openalex.org/I2800006345","display_name":"Leiden University Medical Center","ror":"https://ror.org/05xvt9f17","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2800006345"]},{"id":"https://openalex.org/I4210104433","display_name":"National Institute for Public Health and the Environment","ror":"https://ror.org/01cesdt21","country_code":"NL","type":"facility","lineage":["https://openalex.org/I4210104433"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Jeroen F J Laros","raw_affiliation_strings":["Department of Human Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","National Institute for Public Health and the Environment (RIVM) , 3721 MA Bilthoven, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Human Genetics, Leiden University Medical Center , 2333 ZC Leiden, The Netherlands","institution_ids":["https://openalex.org/I2800006345"]},{"raw_affiliation_string":"National Institute for Public Health and the Environment (RIVM) , 3721 MA Bilthoven, The Netherlands","institution_ids":["https://openalex.org/I4210104433"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5062394749"],"corresponding_institution_ids":["https://openalex.org/I121797337","https://openalex.org/I2800006345"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.1783,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.51880039,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"39","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10317","display_name":"Advanced Database Systems and Queries","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6782957315444946},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.6284287571907043},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.48896825313568115},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.48315948247909546},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.44101768732070923},{"id":"https://openalex.org/keywords/relational-algebra","display_name":"Relational algebra","score":0.4376533329486847},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.42118048667907715},{"id":"https://openalex.org/keywords/relation-algebra","display_name":"Relation algebra","score":0.41707462072372437},{"id":"https://openalex.org/keywords/algebra-over-a-field","display_name":"Algebra over a field","score":0.28072652220726013},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.24643009901046753},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.23296576738357544},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.1979561746120453},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19185426831245422},{"id":"https://openalex.org/keywords/two-element-boolean-algebra","display_name":"Two-element Boolean algebra","score":0.18849515914916992},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09206607937812805},{"id":"https://openalex.org/keywords/algebra-representation","display_name":"Algebra representation","score":0.09111437201499939}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6782957315444946},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.6284287571907043},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.48896825313568115},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.48315948247909546},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.44101768732070923},{"id":"https://openalex.org/C95916125","wikidata":"https://www.wikidata.org/wiki/Q840540","display_name":"Relational algebra","level":3,"score":0.4376533329486847},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.42118048667907715},{"id":"https://openalex.org/C10282146","wikidata":"https://www.wikidata.org/wiki/Q5965969","display_name":"Relation algebra","level":5,"score":0.41707462072372437},{"id":"https://openalex.org/C136119220","wikidata":"https://www.wikidata.org/wiki/Q1000660","display_name":"Algebra over a field","level":2,"score":0.28072652220726013},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.24643009901046753},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.23296576738357544},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.1979561746120453},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19185426831245422},{"id":"https://openalex.org/C207764348","wikidata":"https://www.wikidata.org/wiki/Q7858706","display_name":"Two-element Boolean algebra","level":4,"score":0.18849515914916992},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09206607937812805},{"id":"https://openalex.org/C14394260","wikidata":"https://www.wikidata.org/wiki/Q4723980","display_name":"Algebra representation","level":3,"score":0.09111437201499939},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btad001","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad001","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad001/48909273/btad001.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36594541","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36594541","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9879725","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9879725","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9879725/pdf/btad001.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:scholarlypublications.universiteitleiden.nl:item_3720600","is_oa":true,"landing_page_url":"https://hdl.handle.net/1887/3720600","pdf_url":"https://scholarlypublications.universiteitleiden.nl/access/item%3A3720601/view","source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Article / Letter to editor"},{"id":"pmh:oai:scholarlypublications.universiteitleiden.nl:item_4082076","is_oa":true,"landing_page_url":"https://academic.oup.com/bioinformatics/article/39/1/btad001/6967432","pdf_url":"https://scholarlypublications.universiteitleiden.nl/access/item%3A4082077/view","source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Article / Letter to editor"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btad001","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btad001","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btad001/48909273/btad001.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4313437202.pdf"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W1608492704","https://openalex.org/W1647671624","https://openalex.org/W1969483458","https://openalex.org/W1970026646","https://openalex.org/W1973549009","https://openalex.org/W2001496424","https://openalex.org/W2003308075","https://openalex.org/W2071184135","https://openalex.org/W2104549677","https://openalex.org/W2108996658","https://openalex.org/W2115089273","https://openalex.org/W2122732537","https://openalex.org/W2142434250","https://openalex.org/W2149992227","https://openalex.org/W2155306111","https://openalex.org/W2161183224","https://openalex.org/W2161484642","https://openalex.org/W2309021002","https://openalex.org/W2567598959","https://openalex.org/W2756892369","https://openalex.org/W2804425727","https://openalex.org/W2914847164","https://openalex.org/W2949857618","https://openalex.org/W2952053464","https://openalex.org/W2952222590","https://openalex.org/W2988303005","https://openalex.org/W3023585919","https://openalex.org/W3104087617","https://openalex.org/W3127526692","https://openalex.org/W3212791962","https://openalex.org/W6636915900"],"related_works":["https://openalex.org/W2089781037","https://openalex.org/W4240624163","https://openalex.org/W2109221906","https://openalex.org/W1581508527","https://openalex.org/W1949546175","https://openalex.org/W2109171159","https://openalex.org/W1870159607","https://openalex.org/W3090944848","https://openalex.org/W2044215335","https://openalex.org/W2005835473"],"abstract_inverted_index":{"A":[0],"Python":[1],"implementation":[2],"is":[3],"available":[4],"at":[5,12],"https://github.com/mutalyzer/algebra/tree/v0.2.0":[6],"as":[7,9],"well":[8],"an":[10],"interface":[11],"https://mutalyzer.nl/algebra.":[13]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-07T16:01:11.037858","created_date":"2025-10-10T00:00:00"}
