{"id":"https://openalex.org/W4312210983","doi":"https://doi.org/10.1093/bioinformatics/btac840","title":"screenwerk: a modular tool for the design and analysis of drug combination screens","display_name":"screenwerk: a modular tool for the design and analysis of drug combination screens","publication_year":2022,"publication_date":"2022-12-26","ids":{"openalex":"https://openalex.org/W4312210983","doi":"https://doi.org/10.1093/bioinformatics/btac840","pmid":"https://pubmed.ncbi.nlm.nih.gov/36573326"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac840","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac840","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac840/48521765/btac840.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac840/48521765/btac840.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017559494","display_name":"Robert Hanes","orcid":"https://orcid.org/0000-0001-6544-2182"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Robert Hanes","raw_affiliation_strings":["Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital , 0379 Oslo, Norway","Section for Biochemistry and Molecular Biology, Faculty of Mathematics and Natural Sciences, University of Oslo , 0316 Oslo, Norway"],"raw_orcid":"https://orcid.org/0000-0001-6544-2182","affiliations":[{"raw_affiliation_string":"Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital , 0379 Oslo, Norway","institution_ids":["https://openalex.org/I1281400175"]},{"raw_affiliation_string":"Section for Biochemistry and Molecular Biology, Faculty of Mathematics and Natural Sciences, University of Oslo , 0316 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008620803","display_name":"Pilar Ayuda\u2010Dur\u00e1n","orcid":"https://orcid.org/0000-0002-9799-3680"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Pilar Ayuda-Dur\u00e1n","raw_affiliation_strings":["Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital , 0379 Oslo, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital , 0379 Oslo, Norway","institution_ids":["https://openalex.org/I1281400175"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089323377","display_name":"Leiv R\u00f8nneberg","orcid":"https://orcid.org/0000-0003-4836-4164"},"institutions":[{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I4210134973","display_name":"MRC Biostatistics Unit","ror":"https://ror.org/046vje122","country_code":"GB","type":"facility","lineage":["https://openalex.org/I241749","https://openalex.org/I4210087105","https://openalex.org/I4210134973","https://openalex.org/I90344618"]}],"countries":["GB","NO"],"is_corresponding":false,"raw_author_name":"Leiv R\u00f8nneberg","raw_affiliation_strings":["MRC Biostatistics Unit, University of Cambridge , Cambridge CB2 0SR, UK","Oslo Centre for Biostatistics and Epidemiology (OCBE), University of Oslo , 0317 Oslo, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MRC Biostatistics Unit, University of Cambridge , Cambridge CB2 0SR, UK","institution_ids":["https://openalex.org/I241749","https://openalex.org/I4210134973"]},{"raw_affiliation_string":"Oslo Centre for Biostatistics and Epidemiology (OCBE), University of Oslo , 0317 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031803655","display_name":"Sigve Nakken","orcid":"https://orcid.org/0000-0001-8468-2050"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Sigve Nakken","raw_affiliation_strings":["Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","Department of Informatics, Centre for Bioinformatics, University of Oslo , Oslo 0372, Norway","Department of Tumor Biology, Institute for Cancer Research, Oslo University Hospital , Oslo 0379, Norway"],"raw_orcid":"https://orcid.org/0000-0001-8468-2050","affiliations":[{"raw_affiliation_string":"Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Informatics, Centre for Bioinformatics, University of Oslo , Oslo 0372, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Tumor Biology, Institute for Cancer Research, Oslo University Hospital , Oslo 0379, Norway","institution_ids":["https://openalex.org/I1281400175"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083493986","display_name":"Eivind Hovig","orcid":"https://orcid.org/0000-0002-9103-1077"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Eivind Hovig","raw_affiliation_strings":["Department of Informatics, Centre for Bioinformatics, University of Oslo , Oslo 0372, Norway","Department of Tumor Biology, Institute for Cancer Research, Oslo University Hospital , Oslo 0379, Norway"],"raw_orcid":"https://orcid.org/0000-0002-9103-1077","affiliations":[{"raw_affiliation_string":"Department of Informatics, Centre for Bioinformatics, University of Oslo , Oslo 0372, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Tumor Biology, Institute for Cancer Research, Oslo University Hospital , Oslo 0379, Norway","institution_ids":["https://openalex.org/I1281400175"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077473496","display_name":"Manuela Zucknick","orcid":"https://orcid.org/0000-0003-1317-7422"},"institutions":[{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Manuela Zucknick","raw_affiliation_strings":["Oslo Centre for Biostatistics and Epidemiology (OCBE), University of Oslo , 0317 Oslo, Norway"],"raw_orcid":"https://orcid.org/0000-0003-1317-7422","affiliations":[{"raw_affiliation_string":"Oslo Centre for Biostatistics and Epidemiology (OCBE), University of Oslo , 0317 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087017498","display_name":"Jorrit M. Enserink","orcid":"https://orcid.org/0000-0002-2394-5387"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Jorrit M Enserink","raw_affiliation_strings":["Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital , 0379 Oslo, Norway","Section for Biochemistry and Molecular Biology, Faculty of Mathematics and Natural Sciences, University of Oslo , 0316 Oslo, Norway"],"raw_orcid":"https://orcid.org/0000-0002-2394-5387","affiliations":[{"raw_affiliation_string":"Centre for Cancer Cell Reprogramming, Faculty of Medicine, Institute of Clinical Medicine, University of Oslo , 0318 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital , 0379 Oslo, Norway","institution_ids":["https://openalex.org/I1281400175"]},{"raw_affiliation_string":"Section for Biochemistry and Molecular Biology, Faculty of Mathematics and Natural Sciences, University of Oslo , 0316 Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5087017498"],"corresponding_institution_ids":["https://openalex.org/I1281400175","https://openalex.org/I184942183"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.4393,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.75626566,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"39","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.421099990606308,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.421099990606308,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.41029998660087585,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.04470000043511391,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7975791692733765},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.6699358820915222},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.604334831237793},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5991251468658447},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5110881924629211},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.49814629554748535},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.4686775803565979},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.4115544855594635},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.41154155135154724},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33294615149497986},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2653099596500397},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.19161099195480347}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7975791692733765},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6699358820915222},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.604334831237793},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5991251468658447},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5110881924629211},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.49814629554748535},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.4686775803565979},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.4115544855594635},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.41154155135154724},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33294615149497986},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2653099596500397},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19161099195480347}],"mesh":[{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000078332","descriptor_name":"Data Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004338","descriptor_name":"Drug Combinations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004338","descriptor_name":"Drug Combinations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004338","descriptor_name":"Drug Combinations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/bioinformatics/btac840","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac840","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac840/48521765/btac840.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36573326","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36573326","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/345877","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/345877","pdf_url":"https://www.repository.cam.ac.uk/bitstreams/d3a8af96-aff4-4173-8346-6f66fb332c83/download","source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"nlmid: 9808944","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9825784","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9825784","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:www.duo.uio.no:10852/99532","is_oa":true,"landing_page_url":"http://hdl.handle.net/10852/99532","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"1367-4803","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/362725","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/362725","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Other"},{"id":"doi:10.17863/cam.93299","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.93299","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac840","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac840","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac840/48521765/btac840.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.5299999713897705,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2196644364","display_name":null,"funder_award_id":"#262652","funder_id":"https://openalex.org/F4320323299","funder_display_name":"Norges Forskningsr\u00e5d"},{"id":"https://openalex.org/G2328988699","display_name":null,"funder_award_id":"2019096","funder_id":"https://openalex.org/F4320335102","funder_display_name":"Helse S\u00f8r-\u00d8st RHF"},{"id":"https://openalex.org/G2389227461","display_name":null,"funder_award_id":"294916","funder_id":"https://openalex.org/F4320323299","funder_display_name":"Norges Forskningsr\u00e5d"},{"id":"https://openalex.org/G2660560953","display_name":"Integrated Solutions for Improve the quality of the rest","funder_award_id":"262652","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4285542155","display_name":null,"funder_award_id":"2018012","funder_id":"https://openalex.org/F4320335102","funder_display_name":"Helse S\u00f8r-\u00d8st RHF"},{"id":"https://openalex.org/G434337789","display_name":null,"funder_award_id":"HORIZON2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G501826644","display_name":"RESISTANCE UNDER COMBINATORIAL TREATMENT IN ER+ AND ER- BREAST CANCER.","funder_award_id":"847912","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"},{"id":"https://openalex.org/F4320335102","display_name":"Helse S\u00f8r-\u00d8st RHF","ror":"https://ror.org/02qx2s478"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4312210983.pdf"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1965370740","https://openalex.org/W1968530572","https://openalex.org/W1991001144","https://openalex.org/W2008621428","https://openalex.org/W2029437336","https://openalex.org/W2044085368","https://openalex.org/W2128542677","https://openalex.org/W2134471382","https://openalex.org/W2151592384","https://openalex.org/W2156078931","https://openalex.org/W2166262263","https://openalex.org/W2600452401","https://openalex.org/W2605233023","https://openalex.org/W2605336808","https://openalex.org/W2800317066","https://openalex.org/W2913447635","https://openalex.org/W2959521790","https://openalex.org/W2994642443","https://openalex.org/W2995793704","https://openalex.org/W3014299867","https://openalex.org/W3119400009","https://openalex.org/W3156988213","https://openalex.org/W4200237095","https://openalex.org/W4200278551","https://openalex.org/W4205686435","https://openalex.org/W4221002124","https://openalex.org/W4226211056"],"related_works":["https://openalex.org/W2019887508","https://openalex.org/W4309247532","https://openalex.org/W2117798581","https://openalex.org/W632256878","https://openalex.org/W4211197663","https://openalex.org/W2491403535","https://openalex.org/W3096946169","https://openalex.org/W2479811461","https://openalex.org/W2113128227","https://openalex.org/W3123068371"],"abstract_inverted_index":{"MOTIVATION:":[0],"There":[1],"is":[2,62,105,142,187,195,207],"a":[3,85,95,146],"rapidly":[4],"growing":[5],"interest":[6],"in":[7,135],"high-throughput":[8],"drug":[9,15,78,133,152,176],"combination":[10,79],"screening":[11],"to":[12,38,98,107,121,128],"identify":[13,129],"synergizing":[14],"interactions":[16,134],"for":[17,32,72,84,149,220],"treatment":[18],"of":[19,77,88,165,175],"various":[20,108,163],"maladies,":[21],"such":[22,40,125],"as":[23,69,126],"cancer":[24],"and":[25,48,75,93,101,131,144,158,168,171,184],"infectious":[26],"disease.":[27],"This":[28],"creates":[29],"the":[30,46,73,173,191],"need":[31],"pipelines":[33,89],"that":[34,52],"can":[35,53,118],"be":[36,54,119],"used":[37],"design":[39,74],"screens,":[41,154],"perform":[42,162],"quality":[43,99,166],"control":[44,100,167],"on":[45,114],"data":[47,50,102,222,229],"generate":[49],"files":[51],"analyzed":[55],"by":[56],"synergy-finding":[57],"bioinformatics":[58],"applications.":[59],"RESULTS:":[60],"screenwerk":[61,104,141],"an":[63,70,112,217],"open-source,":[64],"end-to-end":[65],"modular":[66],"tool":[67,82],"available":[68,188,197,214,231],"R-package":[71,183],"analysis":[76,223],"screens.":[80,178],"The":[81,182],"allows":[83],"customized":[86],"build":[87],"through":[90,215],"its":[91],"modularity":[92],"provides":[94,145],"flexible":[96],"approach":[97],"analysis.":[103],"adaptable":[106],"experimental":[109],"requirements":[110],"with":[111],"emphasis":[113],"precision":[115],"medicine.":[116],"It":[117],"coupled":[120],"other":[122],"R":[123,192],"packages,":[124],"bayesynergy,":[127],"synergistic":[130],"antagonistic":[132],"cell":[136],"lines":[137],"or":[138],"patient":[139],"samples.":[140],"scalable":[143],"complete":[147],"solution":[148],"setting":[150],"up":[151],"sensitivity":[153,177],"read":[155],"raw":[156],"measurements":[157],"consolidate":[159],"different":[160],"datasets,":[161],"types":[164],"analyze,":[169],"report":[170],"visualize":[172],"results":[174],"AVAILABILITY":[179],"AND":[180],"IMPLEMENTATION:":[181],"technical":[185],"documentation":[186],"at":[189,198,209,224,232],"https://github.com/Enserink-lab/screenwerk;":[190],"source":[193],"code":[194],"publicly":[196],"https://github.com/Enserink-lab/screenwerk":[199],"under":[200],"GNU":[201],"General":[202],"Public":[203],"License":[204],"v3.0;":[205],"bayesynergy":[206],"accessible":[208],"https://github.com/ocbe-uio/bayesynergy.":[210],"Selected":[211],"modules":[212],"are":[213,230],"Galaxy,":[216],"open-source":[218],"platform":[219],"FAIR":[221],"https://oncotools.elixir.no.":[225],"SUPPLEMENTARY":[226],"INFORMATION:":[227],"Supplementary":[228],"Bioinformatics":[233],"online.":[234]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":2}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
