{"id":"https://openalex.org/W4313702106","doi":"https://doi.org/10.1093/bioinformatics/btac794","title":"Vaa3D-x for cross-platform teravoxel-scale immersive exploration of multidimensional image data","display_name":"Vaa3D-x for cross-platform teravoxel-scale immersive exploration of multidimensional image data","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4313702106","doi":"https://doi.org/10.1093/bioinformatics/btac794","pmid":"https://pubmed.ncbi.nlm.nih.gov/36610985"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac794","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac794","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac794/48614591/btac794.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac794/48614591/btac794.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086331874","display_name":"Jiangshan Liang","orcid":null},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiangshan Liang","raw_affiliation_strings":["School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063138576","display_name":"Luchen Deng","orcid":null},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Luchen Deng","raw_affiliation_strings":["School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078880519","display_name":"Shize Chen","orcid":"https://orcid.org/0009-0007-6944-977X"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shize Chen","raw_affiliation_strings":["School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100384237","display_name":"Yimin Wang","orcid":"https://orcid.org/0000-0003-2515-6602"},"institutions":[{"id":"https://openalex.org/I32820368","display_name":"Guangdong Polytechnic of Science and Technology","ror":"https://ror.org/01wq2p249","country_code":"CN","type":"education","lineage":["https://openalex.org/I32820368"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yimin Wang","raw_affiliation_strings":["Guangdong Institute of Intelligence Science and Technology , Hengqin, Guangdong, China"],"affiliations":[{"raw_affiliation_string":"Guangdong Institute of Intelligence Science and Technology , Hengqin, Guangdong, China","institution_ids":["https://openalex.org/I32820368"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059773087","display_name":"Zongcai Ruan","orcid":"https://orcid.org/0000-0003-1547-165X"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zongcai Ruan","raw_affiliation_strings":["School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Southeast University , Nanjing, Jiangsu, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032484748","display_name":"Lingli Zhang","orcid":"https://orcid.org/0000-0002-8685-3578"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lingli Zhang","raw_affiliation_strings":["School of Biological Science and Medical Engineering, Southeast University , Nanjing, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Biological Science and Medical Engineering, Southeast University , Nanjing, Jiangsu, China","institution_ids":["https://openalex.org/I76569877"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5032484748"],"corresponding_institution_ids":["https://openalex.org/I76569877"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.5654,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.89444477,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"39","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8285731077194214},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.7147192358970642},{"id":"https://openalex.org/keywords/dissemination","display_name":"Dissemination","score":0.6859060525894165},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6617230772972107},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5105661153793335},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.43882185220718384},{"id":"https://openalex.org/keywords/health-informatics-tools","display_name":"Health informatics tools","score":0.42798006534576416},{"id":"https://openalex.org/keywords/software-visualization","display_name":"Software visualization","score":0.4270392060279846},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.3620755076408386},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3599371910095215},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.336559534072876},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3321041464805603},{"id":"https://openalex.org/keywords/software-system","display_name":"Software system","score":0.3146700859069824},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1914759874343872},{"id":"https://openalex.org/keywords/component-based-software-engineering","display_name":"Component-based software engineering","score":0.15675336122512817}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8285731077194214},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.7147192358970642},{"id":"https://openalex.org/C101780184","wikidata":"https://www.wikidata.org/wiki/Q840576","display_name":"Dissemination","level":2,"score":0.6859060525894165},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6617230772972107},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5105661153793335},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.43882185220718384},{"id":"https://openalex.org/C167785021","wikidata":"https://www.wikidata.org/wiki/Q5691083","display_name":"Health informatics tools","level":3,"score":0.42798006534576416},{"id":"https://openalex.org/C4379982","wikidata":"https://www.wikidata.org/wiki/Q1273511","display_name":"Software visualization","level":5,"score":0.4270392060279846},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.3620755076408386},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3599371910095215},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.336559534072876},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3321041464805603},{"id":"https://openalex.org/C149091818","wikidata":"https://www.wikidata.org/wiki/Q2429814","display_name":"Software system","level":3,"score":0.3146700859069824},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1914759874343872},{"id":"https://openalex.org/C174683762","wikidata":"https://www.wikidata.org/wiki/Q609588","display_name":"Component-based software engineering","level":4,"score":0.15675336122512817},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btac794","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac794","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac794/48614591/btac794.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36610985","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36610985","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9832945","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9832945","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9832945/pdf/btac794.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac794","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac794","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac794/48614591/btac794.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5699999928474426,"display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4313702106.pdf"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W1580913419","https://openalex.org/W2018227909","https://openalex.org/W2018709063","https://openalex.org/W2094944422","https://openalex.org/W2119577952","https://openalex.org/W2966593583","https://openalex.org/W3105310231","https://openalex.org/W6766740334"],"related_works":["https://openalex.org/W2017123803","https://openalex.org/W2320705913","https://openalex.org/W2972608171","https://openalex.org/W2128787319","https://openalex.org/W2110305304","https://openalex.org/W2974071312","https://openalex.org/W2955949264","https://openalex.org/W2101050902","https://openalex.org/W2005011662","https://openalex.org/W3021930970"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-11T14:59:36.786465","created_date":"2025-10-10T00:00:00"}
