{"id":"https://openalex.org/W4308061833","doi":"https://doi.org/10.1093/bioinformatics/btac716","title":"PEMT: a patent enrichment tool for drug discovery","display_name":"PEMT: a patent enrichment tool for drug discovery","publication_year":2022,"publication_date":"2022-11-01","ids":{"openalex":"https://openalex.org/W4308061833","doi":"https://doi.org/10.1093/bioinformatics/btac716","pmid":"https://pubmed.ncbi.nlm.nih.gov/36322820"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac716","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac716","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac716/48448697/btac716.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac716/48448697/btac716.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004719764","display_name":"Yojana Gadiya","orcid":"https://orcid.org/0000-0002-7683-0452"},"institutions":[{"id":"https://openalex.org/I164928964","display_name":"Merck (Germany)","ror":"https://ror.org/04b2dty93","country_code":"DE","type":"company","lineage":["https://openalex.org/I164928964"]},{"id":"https://openalex.org/I4210107844","display_name":"Fraunhofer Institute for Translational Medicine and Pharmacology","ror":"https://ror.org/01s1h3j07","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210107844","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Yojana Gadiya","raw_affiliation_strings":["Fraunhofer Cluster of Excellence for Immune-Mediated Diseases (CIMD) , Frankfurt 60590, Germany","Fraunhofer Institute for Translational Medicine and Pharmacology (ITMP) , Hamburg 22525, Germany"],"affiliations":[{"raw_affiliation_string":"Fraunhofer Cluster of Excellence for Immune-Mediated Diseases (CIMD) , Frankfurt 60590, Germany","institution_ids":["https://openalex.org/I164928964"]},{"raw_affiliation_string":"Fraunhofer Institute for Translational Medicine and Pharmacology (ITMP) , Hamburg 22525, Germany","institution_ids":["https://openalex.org/I4210107844"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028120868","display_name":"Andrea Zaliani","orcid":"https://orcid.org/0000-0002-1740-8390"},"institutions":[{"id":"https://openalex.org/I164928964","display_name":"Merck (Germany)","ror":"https://ror.org/04b2dty93","country_code":"DE","type":"company","lineage":["https://openalex.org/I164928964"]},{"id":"https://openalex.org/I4210107844","display_name":"Fraunhofer Institute for Translational Medicine and Pharmacology","ror":"https://ror.org/01s1h3j07","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210107844","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andrea Zaliani","raw_affiliation_strings":["Fraunhofer Cluster of Excellence for Immune-Mediated Diseases (CIMD) , Frankfurt 60590, Germany","Fraunhofer Institute for Translational Medicine and Pharmacology (ITMP) , Hamburg 22525, Germany"],"affiliations":[{"raw_affiliation_string":"Fraunhofer Cluster of Excellence for Immune-Mediated Diseases (CIMD) , Frankfurt 60590, Germany","institution_ids":["https://openalex.org/I164928964"]},{"raw_affiliation_string":"Fraunhofer Institute for Translational Medicine and Pharmacology (ITMP) , Hamburg 22525, Germany","institution_ids":["https://openalex.org/I4210107844"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052911277","display_name":"Philip Gribbon","orcid":"https://orcid.org/0000-0001-7655-2459"},"institutions":[{"id":"https://openalex.org/I164928964","display_name":"Merck (Germany)","ror":"https://ror.org/04b2dty93","country_code":"DE","type":"company","lineage":["https://openalex.org/I164928964"]},{"id":"https://openalex.org/I4210107844","display_name":"Fraunhofer Institute for Translational Medicine and Pharmacology","ror":"https://ror.org/01s1h3j07","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210107844","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philip Gribbon","raw_affiliation_strings":["Fraunhofer Cluster of Excellence for Immune-Mediated Diseases (CIMD) , Frankfurt 60590, Germany","Fraunhofer Institute for Translational Medicine and Pharmacology (ITMP) , Hamburg 22525, Germany"],"affiliations":[{"raw_affiliation_string":"Fraunhofer Cluster of Excellence for Immune-Mediated Diseases (CIMD) , Frankfurt 60590, Germany","institution_ids":["https://openalex.org/I164928964"]},{"raw_affiliation_string":"Fraunhofer Institute for Translational Medicine and Pharmacology (ITMP) , Hamburg 22525, Germany","institution_ids":["https://openalex.org/I4210107844"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003139478","display_name":"Martin Hofmann\u2010Apitius","orcid":"https://orcid.org/0000-0001-9012-6720"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210164149","display_name":"Bonn Aachen International Center for Information Technology","ror":"https://ror.org/054zhq066","country_code":"DE","type":"facility","lineage":["https://openalex.org/I135140700","https://openalex.org/I155417937","https://openalex.org/I4210164149","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Hofmann-Apitius","raw_affiliation_strings":["Bonn-Aachen International Center for Information Technology (B-IT), University of Bonn , Bonn 53113, Germany","Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing (SCAI) , Sankt Augustin 53754, Germany"],"affiliations":[{"raw_affiliation_string":"Bonn-Aachen International Center for Information Technology (B-IT), University of Bonn , Bonn 53113, Germany","institution_ids":["https://openalex.org/I4210164149","https://openalex.org/I135140700"]},{"raw_affiliation_string":"Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing (SCAI) , Sankt Augustin 53754, Germany","institution_ids":["https://openalex.org/I4210098248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5004719764"],"corresponding_institution_ids":["https://openalex.org/I164928964","https://openalex.org/I4210107844"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.2629,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.89710482,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"39","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7348673343658447},{"id":"https://openalex.org/keywords/chembl","display_name":"chEMBL","score":0.5811623930931091},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.5725684762001038},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5581896305084229},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5107738971710205},{"id":"https://openalex.org/keywords/patent-visualisation","display_name":"Patent visualisation","score":0.4846825897693634},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.441995233297348},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.43008679151535034},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.41412049531936646},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.30557286739349365},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.17699921131134033},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09012314677238464}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7348673343658447},{"id":"https://openalex.org/C63222358","wikidata":"https://www.wikidata.org/wiki/Q6120337","display_name":"chEMBL","level":3,"score":0.5811623930931091},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.5725684762001038},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5581896305084229},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5107738971710205},{"id":"https://openalex.org/C114419676","wikidata":"https://www.wikidata.org/wiki/Q6505871","display_name":"Patent visualisation","level":2,"score":0.4846825897693634},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.441995233297348},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.43008679151535034},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.41412049531936646},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.30557286739349365},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.17699921131134033},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09012314677238464},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btac716","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac716","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac716/48448697/btac716.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36322820","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36322820","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:publica.fraunhofer.de:publica/434176","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/434176","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9805556","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9805556","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac716","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac716","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/39/1/btac716/48448697/btac716.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G352791218","display_name":null,"funder_award_id":"(BMBF)","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G7225624288","display_name":null,"funder_award_id":"This work was","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G7819321460","display_name":null,"funder_award_id":"01GM2003A","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4308061833.pdf","grobid_xml":"https://content.openalex.org/works/W4308061833.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1976543333","https://openalex.org/W2012746420","https://openalex.org/W2062584010","https://openalex.org/W2096541451","https://openalex.org/W2176758925","https://openalex.org/W2405275595","https://openalex.org/W2566505805","https://openalex.org/W2739999456","https://openalex.org/W2789856736","https://openalex.org/W2914511090","https://openalex.org/W2973480958","https://openalex.org/W6713841166"],"related_works":["https://openalex.org/W2800402488","https://openalex.org/W2155478691","https://openalex.org/W3005441379","https://openalex.org/W1552948952","https://openalex.org/W4310672789","https://openalex.org/W4388455891","https://openalex.org/W2096541451","https://openalex.org/W2789551765","https://openalex.org/W4289314232","https://openalex.org/W4308061833"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":13}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
