{"id":"https://openalex.org/W4293051673","doi":"https://doi.org/10.1093/bioinformatics/btac581","title":"LipidMS 3.0: an R-package and a web-based tool for LC-MS/MS data processing and lipid annotation","display_name":"LipidMS 3.0: an R-package and a web-based tool for LC-MS/MS data processing and lipid annotation","publication_year":2022,"publication_date":"2022-08-24","ids":{"openalex":"https://openalex.org/W4293051673","doi":"https://doi.org/10.1093/bioinformatics/btac581","pmid":"https://pubmed.ncbi.nlm.nih.gov/36005855"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac581","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac581","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084368873","display_name":"Maria Isabel Alcoriza\u2010Balaguer","orcid":"https://orcid.org/0000-0001-5691-2787"},"institutions":[{"id":"https://openalex.org/I4210121834","display_name":"Leitat Technological Center","ror":"https://ror.org/02njs1t69","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210121834"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Mar\u00eda Isabel Alcoriza-Balaguer","raw_affiliation_strings":["Biomarkers and Precision Medicine Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain"],"affiliations":[{"raw_affiliation_string":"Biomarkers and Precision Medicine Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","institution_ids":["https://openalex.org/I4210121834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050185043","display_name":"Juan Carlos Garc\u00eda\u2010Ca\u00f1averas","orcid":"https://orcid.org/0000-0001-7112-1537"},"institutions":[{"id":"https://openalex.org/I4210121834","display_name":"Leitat Technological Center","ror":"https://ror.org/02njs1t69","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210121834"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Carlos Garc\u00eda-Ca\u00f1averas","raw_affiliation_strings":["Biomarkers and Precision Medicine Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain"],"affiliations":[{"raw_affiliation_string":"Biomarkers and Precision Medicine Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","institution_ids":["https://openalex.org/I4210121834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043299894","display_name":"Francisco Javier Ripoll Esteve","orcid":"https://orcid.org/0000-0001-9750-4720"},"institutions":[{"id":"https://openalex.org/I4210121834","display_name":"Leitat Technological Center","ror":"https://ror.org/02njs1t69","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210121834"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Francisco Javier Ripoll-Esteve","raw_affiliation_strings":["Department of Informatics, Health Research Institute-Hospital La Fe , Valencia 46026, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","institution_ids":["https://openalex.org/I4210121834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062095706","display_name":"Marta Roca","orcid":"https://orcid.org/0000-0003-0708-6364"},"institutions":[{"id":"https://openalex.org/I4210121834","display_name":"Leitat Technological Center","ror":"https://ror.org/02njs1t69","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210121834"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Marta Roca","raw_affiliation_strings":["Analytical Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain"],"affiliations":[{"raw_affiliation_string":"Analytical Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","institution_ids":["https://openalex.org/I4210121834"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083933505","display_name":"Agust\u00edn Lahoz","orcid":"https://orcid.org/0000-0001-7232-0626"},"institutions":[{"id":"https://openalex.org/I4210121834","display_name":"Leitat Technological Center","ror":"https://ror.org/02njs1t69","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210121834"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Agust\u00edn Lahoz","raw_affiliation_strings":["Analytical Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","Biomarkers and Precision Medicine Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain"],"affiliations":[{"raw_affiliation_string":"Analytical Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","institution_ids":["https://openalex.org/I4210121834"]},{"raw_affiliation_string":"Biomarkers and Precision Medicine Unit, Health Research Institute-Hospital La Fe , Valencia 46026, Spain","institution_ids":["https://openalex.org/I4210121834"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5084368873"],"corresponding_institution_ids":["https://openalex.org/I4210121834"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.9547,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.73296933,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"38","issue":"20","first_page":"4826","last_page":"4828"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12073","display_name":"Isotope Analysis in Ecology","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8110858201980591},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.719605565071106},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6965460181236267},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6574980020523071},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.4906536638736725},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.42592304944992065},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32819080352783203},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1413019895553589},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.13072264194488525},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10377594828605652}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8110858201980591},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.719605565071106},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6965460181236267},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6574980020523071},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.4906536638736725},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.42592304944992065},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32819080352783203},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1413019895553589},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.13072264194488525},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10377594828605652}],"mesh":[{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008055","descriptor_name":"Lipids","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btac581","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac581","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36005855","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36005855","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.5600000023841858}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1543068333","https://openalex.org/W1964010911","https://openalex.org/W1975783279","https://openalex.org/W2081465448","https://openalex.org/W2593533643","https://openalex.org/W2734782517","https://openalex.org/W2766130600","https://openalex.org/W2902859004","https://openalex.org/W2995774362","https://openalex.org/W3024889646","https://openalex.org/W3114702865"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W4380994516","https://openalex.org/W2556260348"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2}],"updated_date":"2026-04-17T18:11:37.981687","created_date":"2025-10-10T00:00:00"}