{"id":"https://openalex.org/W4283332631","doi":"https://doi.org/10.1093/bioinformatics/btac547","title":"Guided interactive image segmentation using machine learning and color-based image set clustering","display_name":"Guided interactive image segmentation using machine learning and color-based image set clustering","publication_year":2022,"publication_date":"2022-08-17","ids":{"openalex":"https://openalex.org/W4283332631","doi":"https://doi.org/10.1093/bioinformatics/btac547","pmid":"https://pubmed.ncbi.nlm.nih.gov/35976110"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac547","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac547","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/19/4622/46222026/btac547.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/19/4622/46222026/btac547.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009783106","display_name":"Adrian Friebel","orcid":"https://orcid.org/0000-0002-9157-4418"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Adrian Friebel","raw_affiliation_strings":["Institute of Computer Science, Leipzig University , Leipzig 04107, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Leipzig University , Leipzig 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001459911","display_name":"Tim Johann","orcid":"https://orcid.org/0000-0001-5792-1562"},"institutions":[{"id":"https://openalex.org/I4210166399","display_name":"Leibniz Research Centre for Working Environment and Human Factors","ror":"https://ror.org/05cj29x94","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210166399"]},{"id":"https://openalex.org/I200332995","display_name":"TU Dortmund University","ror":"https://ror.org/01k97gp34","country_code":"DE","type":"education","lineage":["https://openalex.org/I200332995"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tim Johann","raw_affiliation_strings":["IfADo\u2014Leibniz Research Centre for Working Environment and Human Factors , Dortmund 44139, Germany"],"affiliations":[{"raw_affiliation_string":"IfADo\u2014Leibniz Research Centre for Working Environment and Human Factors , Dortmund 44139, Germany","institution_ids":["https://openalex.org/I200332995","https://openalex.org/I4210166399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023409487","display_name":"Dirk Drasdo","orcid":"https://orcid.org/0000-0002-9995-5987"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210166399","display_name":"Leibniz Research Centre for Working Environment and Human Factors","ror":"https://ror.org/05cj29x94","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210166399"]},{"id":"https://openalex.org/I4210126360","display_name":"Inria Saclay - \u00cele de France","ror":"https://ror.org/0315e5x55","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210126360"]},{"id":"https://openalex.org/I200332995","display_name":"TU Dortmund University","ror":"https://ror.org/01k97gp34","country_code":"DE","type":"education","lineage":["https://openalex.org/I200332995"]}],"countries":["DE","FR"],"is_corresponding":false,"raw_author_name":"Dirk Drasdo","raw_affiliation_strings":["INRIA Saclay-\u00cele de France, Group SIMBIOTX , Palaiseau 91120, France","IfADo\u2014Leibniz Research Centre for Working Environment and Human Factors , Dortmund 44139, Germany","Modelling and Analysis for Medical and Biological Applications"],"affiliations":[{"raw_affiliation_string":"INRIA Saclay-\u00cele de France, Group SIMBIOTX , Palaiseau 91120, France","institution_ids":["https://openalex.org/I4210126360","https://openalex.org/I1326498283"]},{"raw_affiliation_string":"IfADo\u2014Leibniz Research Centre for Working Environment and Human Factors , Dortmund 44139, Germany","institution_ids":["https://openalex.org/I200332995","https://openalex.org/I4210166399"]},{"raw_affiliation_string":"Modelling and Analysis for Medical and Biological Applications","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006024974","display_name":"Stefan Hoehme","orcid":"https://orcid.org/0000-0002-9716-9587"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Hoehme","raw_affiliation_strings":["Institute of Computer Science, Leipzig University , Leipzig 04107, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Leipzig University , Leipzig 04107, Germany","institution_ids":["https://openalex.org/I926574661"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5009783106"],"corresponding_institution_ids":["https://openalex.org/I926574661"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.057,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.826156,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"38","issue":"19","first_page":"4622","last_page":"4628"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9812999963760376,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8072184324264526},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7486456036567688},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.618304967880249},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.6174858212471008},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5802087187767029},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.557174563407898},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.521870493888855},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5138511657714844},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.47650590538978577},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.45421090722084045},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.44229209423065186},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4410132169723511},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3266094923019409}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8072184324264526},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7486456036567688},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.618304967880249},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.6174858212471008},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5802087187767029},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.557174563407898},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.521870493888855},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5138511657714844},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.47650590538978577},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.45421090722084045},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.44229209423065186},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4410132169723511},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3266094923019409},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btac547","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac547","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/19/4622/46222026/btac547.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35976110","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35976110","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-03702928v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-03702928","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2022, 38 (19), pp.4622-4628. &#x27E8;10.1093/bioinformatics/btac547&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:frl.publisso.de:frl:6438696","is_oa":true,"landing_page_url":"https://repository.publisso.de/resource/frl:6438696","pdf_url":null,"source":{"id":"https://openalex.org/S4377196269","display_name":"PUBLISSO (German National Library of Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210112663","host_organization_name":"ZB MED - Information Centre for Life Sciences","host_organization_lineage":["https://openalex.org/I4210112663"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 38(19):4622\u20134628","raw_type":"Zeitschriftenartikel"},{"id":"pmh:oai:pubmedcentral.nih.gov:9525009","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9525009","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac547","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac547","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/19/4622/46222026/btac547.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G352791218","display_name":null,"funder_award_id":"(BMBF)","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G6052429835","display_name":null,"funder_award_id":"(DFG)","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G6175612530","display_name":null,"funder_award_id":"031L0256C","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G7547033516","display_name":null,"funder_award_id":"HO 4772/1-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8330397625","display_name":null,"funder_award_id":"Funding","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8753588525","display_name":null,"funder_award_id":"031L0257J","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4283332631.pdf","grobid_xml":"https://content.openalex.org/works/W4283332631.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1597336200","https://openalex.org/W1618905105","https://openalex.org/W1880793879","https://openalex.org/W1982677576","https://openalex.org/W1997714736","https://openalex.org/W2019062120","https://openalex.org/W2021305644","https://openalex.org/W2025720061","https://openalex.org/W2043875880","https://openalex.org/W2053802831","https://openalex.org/W2054821087","https://openalex.org/W2058333183","https://openalex.org/W2097998348","https://openalex.org/W2098824882","https://openalex.org/W2099290282","https://openalex.org/W2101807845","https://openalex.org/W2104125540","https://openalex.org/W2118246710","https://openalex.org/W2129104688","https://openalex.org/W2150593711","https://openalex.org/W2160279602","https://openalex.org/W2162540389","https://openalex.org/W2171852577","https://openalex.org/W2224354397","https://openalex.org/W2395611524","https://openalex.org/W2499316477","https://openalex.org/W2585293115","https://openalex.org/W2592107721","https://openalex.org/W2592920807","https://openalex.org/W2592929672","https://openalex.org/W2601810315","https://openalex.org/W2604272474","https://openalex.org/W2975634117","https://openalex.org/W2998768810","https://openalex.org/W3035786797","https://openalex.org/W6635816984","https://openalex.org/W6636501900","https://openalex.org/W6639203865","https://openalex.org/W6640054144","https://openalex.org/W6645986039","https://openalex.org/W6674385629","https://openalex.org/W6675096717","https://openalex.org/W6675720598","https://openalex.org/W6679023061","https://openalex.org/W6683565079","https://openalex.org/W6685529966","https://openalex.org/W6734165319","https://openalex.org/W6735463952","https://openalex.org/W6735898417"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2804364458","https://openalex.org/W4298130764","https://openalex.org/W2611989081","https://openalex.org/W2132641928","https://openalex.org/W4310225030","https://openalex.org/W2090259340","https://openalex.org/W2393816671","https://openalex.org/W2158836806","https://openalex.org/W1522196789"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-03-12T08:34:05.389933","created_date":"2025-10-10T00:00:00"}
